LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo02g0534	ATGGCTGAAATAGAATGGCGTGAGGGCTTCGGCTTGGAGAGTTTTGTTGGCCACATCAACCCCACAGTCCCGTCGCGTGTGAAAGTCCGGCACCGTCGCAGGAGCGTGAGGTCGTCTCATCTGTTGGAGGGCGCTCTCACTGTGTTCACCGTGCCTCTGTCAGCGCCACCGTGCGCAGTAACCGTCTCTTCTGTTCGTGCTTCCCTCCCGTGCGAAACATCACTGGACATTGGCATGGATGAGGCGGCGTTTGGAATAGAATATTTAGATGGTGATGGTGACCTGGGCAATAATGTACGTGACAGTGGTTTAACAAGGCCGGAGGAGGTGATGGAGATGTTGTTTAACTCTCCTGATGAGGCTGCTCGTTTCTACGAACAGTATAGCCGAGGCAAGGGTTTTGCTATGCGTGTTGGTAAGAAGTTAAGAAATAAGAATGGGGACATCGTGCGATACACATATTTGTGCAACAGAGAAGGGTTTAGGCAAAAGAAGTGGGTGGAGTTGGAAGGAAGAAAGAGAGAGCACAAGGTGGTTACGCGATGTGGGTGCATGGCAGAGATGCATATCAAGCAAAATGGTCAGATGGGTAAATGGTATGTGTCAAGATTTGTAGATGACCACAATCACGAGCTCCTCCCTCCGAAGTTGGTGGAATACTTGCCTCCACATAGGAAGATGTCGGATGTGGACGTAGCCCACATGGATAGCTTACGGCAAGTTGGGATTTCGGTTCCTAAAATATATGAGTCGCTTGCAGCACAGGCTGGTGGCTTTGATCATATCCCATTCACAAAGAGAGATATGTACAACGAAGTGAGGCGCCAACGAGGCATGAGGAAGGGAGATGTCAATGCAACGATAAGGTACTTTGAGGCAGGTGCGAAG	888	0.5	MAEIEWREGFGLESFVGHINPTVPSRVKVRHRRRSVRSSHLLEGALTVFTVPLSAPPCAVTVSSVRASLPCETSLDIGMDEAAFGIEYLDGDGDLGNNVRDSGLTRPEEVMEMLFNSPDEAARFYEQYSRGKGFAMRVGKKLRNKNGDIVRYTYLCNREGFRQKKWVELEGRKREHKVVTRCGCMAEMHIKQNGQMGKWYVSRFVDDHNHELLPPKLVEYLPPHRKMSDVDVAHMDSLRQVGISVPKIYESLAAQAGGFDHIPFTKRDMYNEVRRQRGMRKGDVNATIRYFEAGAK	296

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo02g0534	296	PANTHER	OS07G0283300 PROTEIN	113	231	-	-
	Amo02g0534	296	Pfam	FAR1 DNA-binding domain	123	214	IPR004330	-
	Amo02g0534	296	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	113	231	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo02g0534	Amo-Chr2	6587098	6590349	Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Amo02g0534		FAR1	5.9e-22	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo02g0534	-		-	adu:110274804	466.077