Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0530 ATGGCCACCACCATGATGCAACTCGAGATCGAGCTCAAATCTGCTTCCGATTCGCTCAAGTCATGGGATACAACCTCTATATCATTGACAGCAGCATGTGATCTGTTTATGCGGTATGTAACTAGGACTGCTGCTTTAGAATATGAAGACTTCAATTCGGCTAAATCTCGCTTGATTGAACGTGCCGATAAGTTTGGCGAAATCTCATACACGGCTCGCAAAGTCATTGCAATGCTGAGTCAAGATTTTATATTCAATGGTTGTACAATTTTGGTTCATGGTTTTTCCAGAGTTGTCTTGGAAGTTCTGAAATTCAGCACAAAATAA 327 0.4098 MATTMMQLEIELKSASDSLKSWDTTSISLTAACDLFMRYVTRTAALEYEDFNSAKSRLIERADKFGEISYTARKVIAMLSQDFIFNGCTILVHGFSRVVLEVLKFSTK* 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0530 108 Gene3D - 1 68 IPR042528 -
Amo02g0530 108 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 2 106 - -
Amo02g0530 108 Pfam Initiation factor 2 subunit family 5 104 IPR000649 GO:0044237
Amo02g0530 108 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 2 106 - -
Amo02g0530 108 SUPERFAMILY NagB/RpiA/CoA transferase-like 3 105 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0530 Amo-Chr2 6542234 6544925 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0530 2 108 Eukaryotic Initiation Factors Gene Family AT1G53880 82.243 1.22e-60 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0530 K03239 - csin:114320702 189.504