Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0516 ATGCTAGATGTAAAGCTTCGTCGATTATTCACGTTATTGAGCAATGTCCTCGGAATCGGAATCGAACCGGTGTTGGTAAATTTGTCTAAAGGCCATGCAGTGGAAAGTTTCCCTCTATTGAAGGAGGGACAAGTAGGGCAAGGGCAAGGGCAGGAGCAGGGTCAAGGAACGCCAATGGATTCGCATCGGCGTTCGCATTCGAATTCTCTCTTGCCATTTGAAATATGTGAGAATAGTAAACCTCATCATCATCATCATCATCATCATCGGAGTCGGAGTCGCTTCAAAAGCGGGCAGTTCGATGACGGCTTTTACGTGCATGAAGCCATTGCCAGGTCTGTGTACATAAACGATCCCAAGAGAACCAATGAAAACTATGAGTTCACAGGGAACGAGATCAGAACAAGCAGCTACACTTTGCTTACCTTCTTGCCTAAGAATCTCTTCATTCAGTTCCACAGAGTTGCTTATCTCTATTTCCTTGCCATTGCCGCTCTCAACCAGCTTCCTCCATTGGCTGTCTTTGGAAGAACCGCCTCTCTCTTCCCCCTCCTCTTCGTCCTCTGTGTCACCGCCATCAAAGATGGCTACGAGGATTGGCGCAAGCACCGCTCCGATCGATTCGAAAACAACAGGGAATGCCTCGTGCTTCAGGAACATGGTAACTTCCGCCCCAAGAAATGGAAGAGAATACAAGCCGGCGACGTGGTTAAGATCTCCACCGACGAGATGATCCCGGCCGACATAGTCTTGCTGGGAACGAGTGATCAGAGTGGGATTGCCTACATTCAGACCATGAATCTGGATGGAGAATCGAACCTGAAAACAAGGTTTGCGAGGCAAGAAACGGTTACGGCAGTGACGTCAGAATCGTGTGGAGTCACGGGAGTTATCAGATGCGAGAAGCCTAACAGGAACATCTATGAGTTTGCAGCCAACATGGAGTTTAACGGGAACAAGATTCCGCTGAACCAATCCAACATCGTGCTTCGGGGTTGCGTGTTGAAGAACACTGACTGGTTAATCGGAGTGGTGGTGTGTGCCGGACAGGAAACAAAAGCAATGCTCAACAGTGCAGCTGCTCCTCCCAAGAGAAGCAAGCTGGAGATATACATGAATAGAGAAACCGGTTGGCTCTCGATTTTTCTTTTTGTGATGTGCTCCGCCGTGGCCCTTGGGACGGCCGTGTGGCTCGTCGCCACAAGCACAGCTGAGACCTTGCCTTACTACAGGAAGACATACCTCAACCTTGGCCCCCATTTTGGAAATTCCGTTATTGTCTTTCAGATCATGATACCGATTTCTCTCTACATCACAATGGAGTTGGTTCGTGTGGGACAGTCTTACTTCATGGTGGAAGACATGGATATGCATGATTCTTCTTGTGGATTAAGATTCCAGTGCAGGTCCTTCAATATAAATGAAGATTTGGGTCAGATACGTTATATATTCTCTGATAAGACTGGAACTCTCACAGAAAACAAAATGGAATTCCGGAAAGCTAGTGTGTTTGGAAAAAATTACGAAAGCTCCATCCCTGTGCCTCCTGCAGTTAAAAGTAAACGAAGATGGAAGCTCAAATCTGAAATTCCCATCGATTATGATCTGATGACATTGTTGCAGAAAGAAGAAGATCCAAGTAGCGAGGAAAGAGTTGCTGCTCACGATTTTTTCATCACGTTGACTGCTTGTAATACTGTGATCCCTGTTGTTAATGGTTCTAGGCCTTCCAAGGAAGATGATGGTGTAGTTAACATTGATTACCAGGGAGAGTCTCCCGATGAACAAGCTCTCGTTTCTGCTGCCTCTGCATACGGTTACACTCTTTTTGAGAGAACAAGTGGACATGTTGTTGTTGACAAAAATGGTGAAAAAATCAGACTGGAAGTGCTGGGGATGCATGAGTTTGACAGTGTGCGGAAAGAATGTCTGTTGTTATTCGGTTTCCGGACAATGCTCGCCTATGCAGAAGCCAGCACAGCATTGTACGACCGGGCTACCAAATTGCGCCATGCAGCATCCCTCATTGAATGCAAGTTGAAGCTGCTTGGAGCTACCGGGATTGAAGACAGGCTGCAAGAGGGTGTCCCTGATACCATTGAGTGCCTTAGACAAGCTGGAATTAAGGTCTGGGTTCTAACCGGCGACAAGCAAGAAACTGCCATTTCAATTGGTGTCTCCTGCAAACTTCTCACCCCAGATATGCATAAGATTATCATAAATGCCAATTCCGAGGCTCATTGCAGAGATCTCTTGGTTGAAGCTAAAGCCAGATATGGTGTGAGACCTTCGGGTAAAGGACATGGGAATGGCAAGTGCAAAACCATTGCTGATTTAGGAAAGGAAGAAGACGAAGAAGATACAGCTCCAATGGCACTCATAATTGATGGCACCAGCTTGGGTTGTGATATGCTGCCGGGTTGCACCCTGCAGAAAGCAGGAATTGTTAATCTTATTAAGAGCCGCACAGATGATATGACATTAGCCATAGGAGACGGGGCCAATGACGTGTCAATGATCCAAATGGCGGACGTTGGTGTTGGAATATGTGGCCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCAATGGGTCAATTTCGGTTCCTGAGAAAACTACTACTGGTTCATGGTCACTGGAATTATCAGCGTCTTGGCTATCTAGTTCTTTACAACTTCTACCGTAATGCTGTCTTTGTTTTCATGCTATTTTGGTATATACTGTGCAGTGCTTTTTCTACAACTTCTGCCTTGACAGAGTGGAGTTGTGTATTATACTCCGTGATATACACATCAATACCTACCGTGATTGTTGGTGTTATGGACAAAGACTTGAGTCAGAAGACTCTGTTGCAGTATCCGAAGCTGTATGGTGCTGGTCACCGGCAAGAGGCTTACAATATTCGATTGTTTTGGTTAACAATGATTGACACACTATGGCAGAGCCTTGTTGTGTTCTTGATTCCAGTACTGACTATCAGAACAGCTCAATGA 2997 0.4611 MLDVKLRRLFTLLSNVLGIGIEPVLVNLSKGHAVESFPLLKEGQVGQGQGQEQGQGTPMDSHRRSHSNSLLPFEICENSKPHHHHHHHHRSRSRFKSGQFDDGFYVHEAIARSVYINDPKRTNENYEFTGNEIRTSSYTLLTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTASLFPLLFVLCVTAIKDGYEDWRKHRSDRFENNRECLVLQEHGNFRPKKWKRIQAGDVVKISTDEMIPADIVLLGTSDQSGIAYIQTMNLDGESNLKTRFARQETVTAVTSESCGVTGVIRCEKPNRNIYEFAANMEFNGNKIPLNQSNIVLRGCVLKNTDWLIGVVVCAGQETKAMLNSAAAPPKRSKLEIYMNRETGWLSIFLFVMCSAVALGTAVWLVATSTAETLPYYRKTYLNLGPHFGNSVIVFQIMIPISLYITMELVRVGQSYFMVEDMDMHDSSCGLRFQCRSFNINEDLGQIRYIFSDKTGTLTENKMEFRKASVFGKNYESSIPVPPAVKSKRRWKLKSEIPIDYDLMTLLQKEEDPSSEERVAAHDFFITLTACNTVIPVVNGSRPSKEDDGVVNIDYQGESPDEQALVSAASAYGYTLFERTSGHVVVDKNGEKIRLEVLGMHEFDSVRKECLLLFGFRTMLAYAEASTALYDRATKLRHAASLIECKLKLLGATGIEDRLQEGVPDTIECLRQAGIKVWVLTGDKQETAISIGVSCKLLTPDMHKIIINANSEAHCRDLLVEAKARYGVRPSGKGHGNGKCKTIADLGKEEDEEDTAPMALIIDGTSLGCDMLPGCTLQKAGIVNLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFRFLRKLLLVHGHWNYQRLGYLVLYNFYRNAVFVFMLFWYILCSAFSTTSALTEWSCVLYSVIYTSIPTVIVGVMDKDLSQKTLLQYPKLYGAGHRQEAYNIRLFWLTMIDTLWQSLVVFLIPVLTIRTAQ* 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0516 998 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 105 643 - -
Amo02g0516 998 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 654 995 - -
Amo02g0516 998 PRINTS P-type cation-transporting ATPase superfamily signature 830 849 - -
Amo02g0516 998 PRINTS P-type cation-transporting ATPase superfamily signature 484 498 - -
Amo02g0516 998 PRINTS P-type cation-transporting ATPase superfamily signature 706 716 - -
Amo02g0516 998 ProSitePatterns E1-E2 ATPases phosphorylation site. 486 492 IPR018303 -
Amo02g0516 998 SFLD p-type atpase 468 881 IPR044492 -
Amo02g0516 998 Pfam Phospholipid-translocating P-type ATPase C-terminal 858 996 IPR032630 -
Amo02g0516 998 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 654 995 - -
Amo02g0516 998 MobiDBLite consensus disorder prediction 46 66 - -
Amo02g0516 998 SUPERFAMILY Calcium ATPase, transduction domain A 215 354 IPR008250 -
Amo02g0516 998 SFLD Haloacid Dehalogenase 468 881 - -
Amo02g0516 998 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 105 643 - -
Amo02g0516 998 SUPERFAMILY HAD-like 472 874 IPR036412 -
Amo02g0516 998 Pfam E1-E2 ATPase 213 442 - -
Amo02g0516 998 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 128 642 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Amo02g0516 998 Gene3D - 187 359 - -
Amo02g0516 998 Gene3D - 680 870 IPR023214 -
Amo02g0516 998 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 810 916 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo02g0516 998 MobiDBLite consensus disorder prediction 44 66 - -
Amo02g0516 998 Pfam haloacid dehalogenase-like hydrolase 480 725 - -
Amo02g0516 998 Pfam Phospholipid-translocating ATPase N-terminal 114 179 IPR032631 -
Amo02g0516 998 Gene3D - 483 648 IPR023299 GO:0000166
Amo02g0516 998 SUPERFAMILY Calcium ATPase, transmembrane domain M 128 995 IPR023298 -
Amo02g0516 998 CDD P-type_ATPase_APLT_Dnf-like 130 990 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0516 Amo-Chr2 6393349 6398231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0516 111 992 Primary Pumps ATPases AT5G04930 51.272 0.0 925
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0516 K14802 - gmx:100788740 1273.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3059 14 129351250 129359910 Amo02g0516 02 6393349 6398231 PCT
Amo04g2120 04 91212485 91221402 Amo02g0516 02 6393349 6398231 PCT
Amo02g0516 02 6393349 6398231 Amo14g3059 14 129351250 129359910 PCT
Amo02g0516 02 6393349 6398231 Amo04g2120 04 91212485 91221402 PCT