Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0515 ATGAAAATGATTATGGAGGATGATGATATTGTTAGCAGGGAGGATGGTATCAAGGCAATAATCGAGGAGGAGCTTGTGAGAGGGCGTGACTTTGCCAATCAGCTAAGACAACGTATCGTCACCAATAAAGAAGATGATGACTCAGCTGATCATCAACGGCTTCTCAGTAACTACGGACAGAAGGCAATCCAGAATGAGAAATACACAAGGAACTACTTCCGATGCACTCACAAGTACGAACAGGGATGCAAAGCAACCAAGTATGTTCAGAGAATTCAAGAGAAGCCTCCGTTGTACAGGGCCACCTATCATGGTCGCCACACCTGCACCAACACAGACACTACTAATAACCACGTACTCATCATGGAGGAATTAGATCATCCTACTTCCTCCTCCTCCTCCATATTCCTCAGCTTTGACAACTCCTTCCCTAATCCACCAACCAATCCCTTTCTTTCACCATCTTCTTCTTCGCTTTTCCCCTCAACAGCACCGCCGCTACCTCCGATGATGATAATGGAAGAGGATCGGCAAGTTCTTCCCTCAACTACTTCAACCCACCCCGTTTTGGATGTTTCGTCAAGGCATCATGTGGTTCCTATATTATCATCGTCAGAAGATAATAATATTTGCTGGGATGATATGATGATGGCTGCCATGTCTCAAGTGTTATACGGTTCTGTTGATGAGGGATGA 696 0.4511 MKMIMEDDDIVSREDGIKAIIEEELVRGRDFANQLRQRIVTNKEDDDSADHQRLLSNYGQKAIQNEKYTRNYFRCTHKYEQGCKATKYVQRIQEKPPLYRATYHGRHTCTNTDTTNNHVLIMEELDHPTSSSSSIFLSFDNSFPNPPTNPFLSPSSSSLFPSTAPPLPPMMIMEEDRQVLPSTTSTHPVLDVSSRHHVVPILSSSEDNNICWDDMMMAAMSQVLYGSVDEG* 232
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0515 231 Gene3D WRKY domain 35 111 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo02g0515 231 SUPERFAMILY WRKY DNA-binding domain 57 110 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo02g0515 231 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 56 205 - -
Amo02g0515 231 ProSiteProfiles WRKY domain profile. 44 107 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo02g0515 231 SMART WRKY_cls 58 111 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo02g0515 231 Pfam WRKY DNA -binding domain 57 109 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo02g0515 231 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 56 205 IPR044810 GO:0003700
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo02g0515 Amo-Chr2 6378462 6380194 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0515 58 141 WRKY Transcription Factor Family AT3G56400 48.352 3.90e-19 82.4
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo02g0515 WRKY 1.4e-15 CL0274
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0515 - - adu:107473290 287.73