Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo02g0515 | ATGAAAATGATTATGGAGGATGATGATATTGTTAGCAGGGAGGATGGTATCAAGGCAATAATCGAGGAGGAGCTTGTGAGAGGGCGTGACTTTGCCAATCAGCTAAGACAACGTATCGTCACCAATAAAGAAGATGATGACTCAGCTGATCATCAACGGCTTCTCAGTAACTACGGACAGAAGGCAATCCAGAATGAGAAATACACAAGGAACTACTTCCGATGCACTCACAAGTACGAACAGGGATGCAAAGCAACCAAGTATGTTCAGAGAATTCAAGAGAAGCCTCCGTTGTACAGGGCCACCTATCATGGTCGCCACACCTGCACCAACACAGACACTACTAATAACCACGTACTCATCATGGAGGAATTAGATCATCCTACTTCCTCCTCCTCCTCCATATTCCTCAGCTTTGACAACTCCTTCCCTAATCCACCAACCAATCCCTTTCTTTCACCATCTTCTTCTTCGCTTTTCCCCTCAACAGCACCGCCGCTACCTCCGATGATGATAATGGAAGAGGATCGGCAAGTTCTTCCCTCAACTACTTCAACCCACCCCGTTTTGGATGTTTCGTCAAGGCATCATGTGGTTCCTATATTATCATCGTCAGAAGATAATAATATTTGCTGGGATGATATGATGATGGCTGCCATGTCTCAAGTGTTATACGGTTCTGTTGATGAGGGATGA | 696 | 0.4511 | MKMIMEDDDIVSREDGIKAIIEEELVRGRDFANQLRQRIVTNKEDDDSADHQRLLSNYGQKAIQNEKYTRNYFRCTHKYEQGCKATKYVQRIQEKPPLYRATYHGRHTCTNTDTTNNHVLIMEELDHPTSSSSSIFLSFDNSFPNPPTNPFLSPSSSSLFPSTAPPLPPMMIMEEDRQVLPSTTSTHPVLDVSSRHHVVPILSSSEDNNICWDDMMMAAMSQVLYGSVDEG* | 232 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo02g0515 | 231 | Gene3D | WRKY domain | 35 | 111 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Amo02g0515 | 231 | SUPERFAMILY | WRKY DNA-binding domain | 57 | 110 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Amo02g0515 | 231 | PANTHER | TRANSCRIPTION FACTOR WRKY FAMILY-RELATED | 56 | 205 | - | - | |
Amo02g0515 | 231 | ProSiteProfiles | WRKY domain profile. | 44 | 107 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo02g0515 | 231 | SMART | WRKY_cls | 58 | 111 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo02g0515 | 231 | Pfam | WRKY DNA -binding domain | 57 | 109 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Amo02g0515 | 231 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 56 | 205 | IPR044810 | GO:0003700 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo02g0515 | Amo-Chr2 | 6378462 | 6380194 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo02g0515 | 58 | 141 | WRKY Transcription Factor Family | AT3G56400 | 48.352 | 3.90e-19 | 82.4 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Amo02g0515 | WRKY | 1.4e-15 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo02g0515 | - | - | adu:107473290 | 287.73 |