Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0506 ATGTGTCCTACCAAACACGATGTGCAACGATTCTTGAATGCCCAAAATATGGACGTAGAATTTGATTGGCTACCTAAATTGGGCAAAATCTTTAACACTGTAGAAGAGGCATGGCAATTTTGGATTGATTATGGTGGGAGGATGGGATTTGGTGTCCACAAGCAATATTCTAACAAAAATGCAGATGGAAAAATTCTAAGTCTTAGGTTCGTCTGTGCCAAAGAAGGTGTTCGTAAATCAAACAAGAGGGATTCTTTGACGATCAGTCCTAGACTTGAAACAAGGACTAATTGTGGTGTTCATGCTCAAGAAATTGAATTGGTAGATGACTCAGGAATCACACAACGGACTTCATTTGAATTGATGAGTAGACAAGTTGGTGGAAGAGAAAATATTGGTTATACACGTTCAGACTAA 417 0.3861 MCPTKHDVQRFLNAQNMDVEFDWLPKLGKIFNTVEEAWQFWIDYGGRMGFGVHKQYSNKNADGKILSLRFVCAKEGVRKSNKRDSLTISPRLETRTNCGVHAQEIELVDDSGITQRTSFELMSRQVGGRENIGYTRSD* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0506 138 Pfam FAR1 DNA-binding domain 39 99 IPR004330 -
Amo02g0506 138 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 100 - -
Amo02g0506 138 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 16 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0506 Amo-Chr2 6318714 6319974 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo02g0506 FAR1 9.2e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0506 - - ahf:112709060 212.231