Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0505 ATGCAACATGAGCGCATGAAGGTGTTGCGCAACCATCGTCTCGTCAACCATACCCGACCCTTCATCGAAAAGCGATTTCCAGTGTATGTGTATCTGTTGAAGGCGAGTGTATCACATTACGTCCATGGATACATCAATTTTGAAGAAGCATTGTATGACACTGCATATGACGTGAGTGAGCATTCTAATTCCACCGACGTTAATGTTCTGTCTTTGAGTGAAGATGACACACCACTTGTGGAACAGGGGAAAGAATCTGAAGACGTTATTCAAAAAAAGGATGATGCTATGGCAATTAATGATGAATTGCCGGATCACACTGGAATTTCAATAGAGGAAATCCCGTACGTAGGATTGAGATTTGATTCGTTGCAGCGGGCACAAGAGTTCTATTCTAATTATGGAAAGAAAGTTGGGTTTGTGACTAGGATTAGGAATACCAACTTTGACAAGACCAAAAAGGAATTAAAGGCAGCATCGCGGGTAAAGAGAATAACAACATCCGGATGCAAAGCAAGGATGTACGTGATGCTTGATAGGCAGAAGGATAATTGGATGGTGTCCAAATTAGAATCGAAGCACACCCATACGTGTTCTGCCAAGCAAGCTGTGCATTACAGTGAGTACAAGGAACTGACCATGCACGCCAATTCCCAACGTCATCGGATGATTGACCTTTATGACGATTGTCGAATGTGGGTTCCAATATATTTTCAAGGTGAATTTGATATCTACGCCTTTTTCGGTGGTTACCTGCATTGCAAAAGTGGACTGGTTCAGTTTGTTCATGAGTATGACAATGTGCTTGGGAACAAAGAGCAAAAGGAATTGGAGGACGATGCTGTAGACTCTAAAGGAGTTCGTGAGTACACAACCTCTAAGTTTAGGGAAGTTCAACATGAATTCAGGAAAAGAGGGGATTGTTTAGTCCGTGGTGTCACTCAAGAGGGTGATTTGTTTCGGGTGACCGTGAACGAGCAATACCTACTATATGGGGAGCCTAGGTCCTGGACGTACATTGTCGAGTTTGACCTAGAGACACACAAGGTTCGGTGCGAATGCAACATGTTTGGATCAAGAGGTATTCTTTGTTGCCACTATCTGCTGTCAAAGTTGCTTGATTATCGTGCAAACTTGGGGTCCAGGCGTGTTCCAACAACACAAAATAGTCTTTCAAAAGTTTCAACGAAGGGTCGCCTGAGATTGAAGAGGCTTGGATCTGAACTTGACACCTCAATCAAGAAATCTATGCGTAGAAAGAAGAAGAATCCACCGCCGGTATCGAATAAATCACAGGAACATGGCGGGTTCTTGTCGTTGTTAAACTCATTTCGGCCTACTTAG 1344 0.433 MQHERMKVLRNHRLVNHTRPFIEKRFPVYVYLLKASVSHYVHGYINFEEALYDTAYDVSEHSNSTDVNVLSLSEDDTPLVEQGKESEDVIQKKDDAMAINDELPDHTGISIEEIPYVGLRFDSLQRAQEFYSNYGKKVGFVTRIRNTNFDKTKKELKAASRVKRITTSGCKARMYVMLDRQKDNWMVSKLESKHTHTCSAKQAVHYSEYKELTMHANSQRHRMIDLYDDCRMWVPIYFQGEFDIYAFFGGYLHCKSGLVQFVHEYDNVLGNKEQKELEDDAVDSKGVREYTTSKFREVQHEFRKRGDCLVRGVTQEGDLFRVTVNEQYLLYGEPRSWTYIVEFDLETHKVRCECNMFGSRGILCCHYLLSKLLDYRANLGSRRVPTTQNSLSKVSTKGRLRLKRLGSELDTSIKKSMRRKKKNPPPVSNKSQEHGGFLSLLNSFRPT* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0505 447 ProSiteProfiles Zinc finger SWIM-type profile. 339 375 IPR007527 GO:0008270
Amo02g0505 447 PANTHER OS01G0607050 PROTEIN 222 376 - -
Amo02g0505 447 PANTHER OS01G0607050 PROTEIN 114 203 - -
Amo02g0505 447 MobiDBLite consensus disorder prediction 414 447 - -
Amo02g0505 447 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 222 376 IPR031052 GO:0006355
Amo02g0505 447 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 114 203 IPR031052 GO:0006355
Amo02g0505 447 MobiDBLite consensus disorder prediction 428 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0505 Amo-Chr2 6310020 6313500 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo02g0505 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0505 - - ahf:112721167 319.316