Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0504 ATGGAAAAAGATCAAAAGATGGGGAGTAGGGTAGATAATAAGTACCTGCCGGTGGTGGCAATGGTGCTGCTACAGGTGATATATGCAGGTATTGCCATTGGAACAAGGACTGTCTTAGTAGAGGGAATGAGCCCAAGGGTCTTTGTTGTCTACCGCCAACTTATGGCAACTCTTGTCATTGTTCCCGTTGCTTATTTCTCTGGGAGAAACTCTGGCTCGTGGTCCTTAAGTTTTAGGAGTTTTTGTCTCATATTCCTTGCCTCACTAGTCGGTGTGACGTTGAATCAGAATCTATTGTATGAGGGTCTATATCTGGTTTCCTCTTCAATTGCAAGTGCAATGGCCAATCTTCTCCCAGCTCTCACTTTTCTTATAGCAGCTCTTCTTCGAATGGAGAGTGTGAATATTGGAAGCTGGAGAGGCATAGCAAAAATAGTAGGGACAGTGGCATGTGTAAGTGGAGCAGTGTCCATGGCATTGTTGAAGGGTCCAAAGCTACTCAATAATTCACAAAAGCTTCCACCATCAAATTCACTTCTCATAGGTTTAGGTGGTCCTGACAACAATTGGTTTCTGGGTTGTCTCTTTCTCTTTGGAAGCAGTTTTTGCTGGTCACTTTGGCTGATTTTGCAGGTTCCAGCATCTGCAAGCCACCCTAATCACTTGTCTCTATCAGCATGGATGTGTTTGATGGCAGCATTACAATCAGGAACAGTCACACTATTCCTGGAGCCACACCCTGCTGCTTGGAAGTTTCACACTCTTCTTGAATTTGCTTCCACTGTATATGCAGGAGTTATGGGATCTGCAGTATCATTCTTTGTGCAAGCATGGTGCATCTCAAGAAGAGGTCCTCTCTTCTCTGCAATGTTCACTCCCTTGTATACTGTCATTACCACCATATTCGCAGCCATAATGCTTCACGAGACCCTATACACTGGAAGCTTGATAGGCGCAATTGGAGTTATTATTGGCTTGTATATTGTGCTGTGGGGTAAGGCTGAAGAAGTAGCTGAAAATGATGATAATGTGACGACCGATCCAATAACACCAGCGGAAGAGGAAGTGAAGATCCACATAATAAAAAATATTAATAATAATAATAATAATATTGAATCAACTGATTTTGAAGAACCCCTTCTCTCCTCCAACTCCCCTTCACATTCTTGA 1170 0.4299 MEKDQKMGSRVDNKYLPVVAMVLLQVIYAGIAIGTRTVLVEGMSPRVFVVYRQLMATLVIVPVAYFSGRNSGSWSLSFRSFCLIFLASLVGVTLNQNLLYEGLYLVSSSIASAMANLLPALTFLIAALLRMESVNIGSWRGIAKIVGTVACVSGAVSMALLKGPKLLNNSQKLPPSNSLLIGLGGPDNNWFLGCLFLFGSSFCWSLWLILQVPASASHPNHLSLSAWMCLMAALQSGTVTLFLEPHPAAWKFHTLLEFASTVYAGVMGSAVSFFVQAWCISRRGPLFSAMFTPLYTVITTIFAAIMLHETLYTGSLIGAIGVIIGLYIVLWGKAEEVAENDDNVTTDPITPAEEEVKIHIIKNINNNNNNIESTDFEEPLLSSNSPSHS* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0504 389 PANTHER WAT1-RELATED PROTEIN 17 362 - -
Amo02g0504 389 Pfam EamA-like transporter family 19 152 IPR000620 GO:0016020|GO:0016021
Amo02g0504 389 Pfam EamA-like transporter family 192 330 IPR000620 GO:0016020|GO:0016021
Amo02g0504 389 PANTHER WAT1-RELATED PROTEIN 17 362 IPR030184 GO:0016021|GO:0022857
Amo02g0504 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 153 - -
Amo02g0504 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 228 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0504 Amo-Chr2 6297213 6302359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0504 13 389 Nodulin-like Gene Family AT4G30420 52.770 2.00e-139 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0504 - - adu:107473294 723.776