Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo02g0491 | ATGCAAGCACGACTTGGGGAATGGAAAGAGCTGTGGAACCATCATCATCATCATCACCAACCGGAACACGACCTCATTCCTCAAGCAAGGCCTCTCTTCCACCAAGATCTTTACAGCTCTGCGGCTACTCTAGGAGTGGGTCCAACTACCGTGTCCGACGATCAGTCACCCTTGATATCGGCCTTCCTGGTGACAGCATCGGCCGTGGGGAGCGGAGCAGCAAGTGGAGCAGGAAGTGGAGCAAGTGGGATTAGCTGCCAGGACTGCGGAAACCAGGTGAAGAAGGATTGCCCTCACATGCGGTGCAGGACATGCTGCAAGAGCCGTGGCTTCGATTGCCAAACCCATGTGAAGAGCACTTGGATTCCCGCTTCCAAGCGCCGCGAGAGGCAACAGTAA | 399 | 0.5564 | MQARLGEWKELWNHHHHHHQPEHDLIPQARPLFHQDLYSSAATLGVGPTTVSDDQSPLISAFLVTASAVGSGAASGAGSGASGISCQDCGNQVKKDCPHMRCRTCCKSRGFDCQTHVKSTWIPASKRRERQQ* | 133 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo02g0491 | 132 | Pfam | Domain of unknown function (DUF702) | 83 | 132 | - | - | |
Amo02g0491 | 132 | TIGRFAM | put_zinc_LRP1: putative zinc finger domain, LRP1 type | 85 | 127 | IPR006510 | - | |
Amo02g0491 | 132 | PANTHER | PROTEIN LATERAL ROOT PRIMORDIUM 1 | 10 | 132 | IPR007818 | GO:0003700|GO:0006355 | |
Amo02g0491 | 132 | PANTHER | TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED | 10 | 132 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo02g0491 | Amo-Chr2 | 6065764 | 6066579 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo02g0491 | 10 | 132 | C2H2 Transcription Factor Family | AT3G51060 | 49.254 | 4.91e-31 | 112 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | SRS | Amo02g0491 | DUF702 | 1.8e-28 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo02g0491 | - | - | aip:107636969 | 199.519 |