Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0476 ATGGAAGTTCCAATGGAGGAGAAACCATTCCCAGCATGGTCATGGTCTGTTGAGGAGTGTTTGAAAGAGTATGGAGTGAAACTCGAAAGGGGTCTGAGCACTTTCGAGGTTCAGAGGAGGCGCGAAAAGTATGGTTGGAATGAGTTAGCAAAGGAGAAAGGGAAGCCATTATGGCAATTGGTATTAGAACAATTTGATGACTTACTGGTAAAGATACTTTTGATTGCAGCATTCATATCATTTATCTTAGCTTACTTTCATGGAGGCGAAACGGGGGAATCTGGATTCGAAGCTTATGTGGAACCACTTGTAATCATTTTGATTCTAGTCCTTAATGCCATTGTTGGAGTTTGGCAAGAGAATAATGCTGAAAAGGCTCTTGAAGCTCTTAAGGAGTTGCAATGTGAATCTGGAAAGGTGTTAAGGGATGGAAATTTTGTGCCGGATTTGCCTGCAAGAGAGCTAGTTCCCGGTGATATTGTGGAGTTGCGCGTCGGAGATAAGGTCCCTGCTGACATGAGAGTTGCAGCCTTGAAAACTTCAACTTTGCGAGCCGAGCAAAGCTCGCTAACCGGAGAAGCAATGCCAGTTCTCAAAGGAACAAGTCCTGTTTTCTTGGATGATTGTGAGTTGCAGGCCAAGGAGAATATGGTCTTTGCAGGAACCACAGTTGTCAATGGGAGTTGTGTTTGTATTGTTATCACCACTGGAATGAACACCGAAATTGGGAAGATACAGAAGCAGATACATGAGGCTTCTCTGGAGGAAAGTGACACTCCTTTGAAGAAGAAATTAGATGAATTTGGTAATAGGCTCACCACTGCAATTGGTATAGTTTGTCTTGTTGTTTGGATCATAAACTACAAGAATTTCCTTTCTTGGGATGTTGTTGATGGATTTCCCTCAAACATCAAATTTTCCTTCCAGAAGTGCACATACTATTTCAAAATCGCCGTTGCACTCGCAGTGGCTGCAATACCAGAAGGTCTGCCTGCTGTTATCACAACTTGTTTAGCACTTGGTACAAGGAAAATGGCACAAAAGAATGCAATTGTTAGAAAGCTTCCAAGTGTAGAAACTTTGGGATGTACTACTGTGATTTGCTCGGATAAAACTGGTACTCTTACGACGAATCAAATGTCCGTGACAGAGTTCTTTACTTTAGGAGGGAGAACCAATGCTTCTCGAGTCATTCGCGTGGAAGGCACAACTTATGATCCAAAAGATGGGGGAATTATTGACTGGACTTGCTTTAACATGGATGCCAACCTTCAAGCCATGGCTGAAATATGTGCAGTTTGTAATGATGCTGGAATTTATTTCGATGGGCGCCTTTTTCGTGCCACAGGCTTGCCTACTGAAGCAGCACTAAAAGTCTTGGTTGAAAAGATGGGAGTTCCAGATACAAAGTCAAAAAACAAGATTACTAATTCACAAAACAACATGGTTGAATCCAACAGTACTGTGAAGTTAGGTTGTTGTGACTGGTGGAATAGAAGATCCAAGAGGGTAGCAACATTAGAGTTTGATCGCGTTCGGAAGTCAATGAGTGTCATTGTTCGCGAACCGGATGGTGAAAATAGGCTTCTTGTAAAGGGTGCTGCTGAGAGTTTACTGGAGAGAAGCTCACATGTGCAACTAGCTGATGGATCTCTGGTTCCAATAGATGAGCAATGCAGGGAATTGCTTCTACATAGACTCATGGAGATGAGTTCGAAGGGATTGCGCTGCTTGGGATTTGCGTACAAGGATGAGTTAGGAGAGTTTTCGGACTACTATGCAGATACTCATCCTTCTCATAACAAATTGCTTGATCCAGCATGCTACTCAGCCATTGAAAGTGATCTAGTTTTTGTTGGTGTTGTTGGTCTAAGAGACCCTCCACGCGAGGAAGTTCATAAAGCAATTGAGGATTGTAAGGAAGCTGGGATAAGAGTTATGGTGATAACTGGTGATAACAAGTCAACAGCAGAGGCTATTTGCAGAGAAATCAGTTTGTTCTCCAAAGATGAGGACCTTAAAGGACAAAGCCTAACAGGTAAAGAATTCATGTCTCTTCCTCCTTCAGAACAAGTTAAGATGCTGCTGAGACCTGGAGGCAAGGTCTTTTCGCGAGCCGAGCCAAGACACAAGCAAGAAATTGTGAGGTTGCTGAAGGACATGGGGGAGATAGTTGCAATGACCGGAGATGGAGTGAACGATGCGCCGGCACTCAAGCTTGCTGATATTGGCATTGCCATGGGAATAACTGGGACAGAGGTTGCTAAAGAAGCTTCAGATATGGTGCTAGCAGATGACAATTTTAGTACAATTGTCACGGCCGTAGCAGAAGGCCGCGCAATTTACAATAACATGAAATCATTCATCAGGTACATGATATCCTCAAATGTTGGAGAAGTTATTTCAATATTCTTGACTGCTGCTCTTGGGATCCCAGAATGCATGATACCAGTGCAGCTCCTGTGGGTGAACTTGGTCACTGATGGTCCACCTGCCACAGCTCTTGGTTTCAACCCTGCTGATGTTGATATCATGCGCAAGCCGCCTCGGAAAAGCAATGATTCTCTCATAAGTTCTTGGGTTCTTGTCCGCTATCTTGTTATTGGCTCTTATGTGGGAATTGCTACAGTTGGAATTTTTGTCTTGTGGTACACTCAAGCTTCTTTTCTAGGCATCAATCTTGTTGGTGATGGCCATACAATCATAGAACTCTCCCAGCTTCTCAACTGGGGAGAGTGCCATTCGTGGCCTAACTTCACGGCCACGCCATTCACAGTCAGTGGCGGCCGAGCAATAACATTCTCAAATCCATGTGACTACTTCTCTGTTGGCAAAGTGAAGGCTATGACTCTGTCCCTCTCTGTATTGGTTGCAATTGAGATGTTCAATTCCCTAAATGCCCTCTCAGAAGAGAATAGCTTGAGAAAGATTCCACCTTGGAGGAACCCTTGGCTTATGGTAGCAATGTCAATATCATTTGGACTCCATTGCCTCATACTCTATACTCCATTCCTTGCTAATGTGTTTGGTGTTGTTCCACTTAGCTTGAATGAGTGGTTTTTGGTGATTCTTATATCAGCACCTGTTATTCTCATTGATGAGATTCTTAAATTGGTGGCTAGGAATCAAAGGAAGGTGAAAAAGGAGAAAGTAGCATGA 3159 0.434 MEVPMEEKPFPAWSWSVEECLKEYGVKLERGLSTFEVQRRREKYGWNELAKEKGKPLWQLVLEQFDDLLVKILLIAAFISFILAYFHGGETGESGFEAYVEPLVIILILVLNAIVGVWQENNAEKALEALKELQCESGKVLRDGNFVPDLPARELVPGDIVELRVGDKVPADMRVAALKTSTLRAEQSSLTGEAMPVLKGTSPVFLDDCELQAKENMVFAGTTVVNGSCVCIVITTGMNTEIGKIQKQIHEASLEESDTPLKKKLDEFGNRLTTAIGIVCLVVWIINYKNFLSWDVVDGFPSNIKFSFQKCTYYFKIAVALAVAAIPEGLPAVITTCLALGTRKMAQKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVTEFFTLGGRTNASRVIRVEGTTYDPKDGGIIDWTCFNMDANLQAMAEICAVCNDAGIYFDGRLFRATGLPTEAALKVLVEKMGVPDTKSKNKITNSQNNMVESNSTVKLGCCDWWNRRSKRVATLEFDRVRKSMSVIVREPDGENRLLVKGAAESLLERSSHVQLADGSLVPIDEQCRELLLHRLMEMSSKGLRCLGFAYKDELGEFSDYYADTHPSHNKLLDPACYSAIESDLVFVGVVGLRDPPREEVHKAIEDCKEAGIRVMVITGDNKSTAEAICREISLFSKDEDLKGQSLTGKEFMSLPPSEQVKMLLRPGGKVFSRAEPRHKQEIVRLLKDMGEIVAMTGDGVNDAPALKLADIGIAMGITGTEVAKEASDMVLADDNFSTIVTAVAEGRAIYNNMKSFIRYMISSNVGEVISIFLTAALGIPECMIPVQLLWVNLVTDGPPATALGFNPADVDIMRKPPRKSNDSLISSWVLVRYLVIGSYVGIATVGIFVLWYTQASFLGINLVGDGHTIIELSQLLNWGECHSWPNFTATPFTVSGGRAITFSNPCDYFSVGKVKAMTLSLSVLVAIEMFNSLNALSEENSLRKIPPWRNPWLMVAMSISFGLHCLILYTPFLANVFGVVPLSLNEWFLVILISAPVILIDEILKLVARNQRKVKKEKVA* 1053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0476 1052 SUPERFAMILY HAD-like 366 832 IPR036412 -
Amo02g0476 1052 Gene3D - 63 1041 - -
Amo02g0476 1052 Pfam Cation transport ATPase (P-type) 433 545 - -
Amo02g0476 1052 CDD P-type_ATPase_SERCA 13 1041 - -
Amo02g0476 1052 PRINTS Sodium/potassium-transporting ATPase signature 361 382 - -
Amo02g0476 1052 PRINTS Sodium/potassium-transporting ATPase signature 981 1005 - -
Amo02g0476 1052 Pfam Cation transporter/ATPase, N-terminus 13 80 IPR004014 -
Amo02g0476 1052 SFLD p-type atpase 349 781 IPR044492 -
Amo02g0476 1052 Gene3D - 365 773 IPR023214 -
Amo02g0476 1052 SUPERFAMILY Calcium ATPase, transduction domain A 140 248 IPR008250 -
Amo02g0476 1052 Pfam E1-E2 ATPase 134 348 - -
Amo02g0476 1052 SMART Cation_ATPase_N_a_2 11 85 IPR004014 -
Amo02g0476 1052 PANTHER CALCIUM-TRANSPORTING ATPASE 8 1048 - -
Amo02g0476 1052 SFLD C1.7: P-type atpase like 349 781 - -
Amo02g0476 1052 PANTHER RETICULUM [ER]-TYPE CALCIUM ATPASE, PUTATIVE-RELATED 8 1048 - -
Amo02g0476 1052 SUPERFAMILY Calcium ATPase, transmembrane domain M 11 1043 IPR023298 -
Amo02g0476 1052 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 375 624 IPR023299 GO:0000166
Amo02g0476 1052 Gene3D - 30 252 - -
Amo02g0476 1052 PRINTS P-type cation-transporting ATPase superfamily signature 186 200 - -
Amo02g0476 1052 PRINTS P-type cation-transporting ATPase superfamily signature 368 382 - -
Amo02g0476 1052 PRINTS P-type cation-transporting ATPase superfamily signature 620 631 - -
Amo02g0476 1052 PRINTS P-type cation-transporting ATPase superfamily signature 642 652 - -
Amo02g0476 1052 PRINTS P-type cation-transporting ATPase superfamily signature 728 747 - -
Amo02g0476 1052 PRINTS P-type cation-transporting ATPase superfamily signature 752 764 - -
Amo02g0476 1052 Gene3D - 378 627 IPR023299 GO:0000166
Amo02g0476 1052 Pfam Cation transporting ATPase, C-terminus 813 1039 IPR006068 -
Amo02g0476 1052 ProSitePatterns E1-E2 ATPases phosphorylation site. 370 376 IPR018303 -
Amo02g0476 1052 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 702 813 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Amo02g0476 1052 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 306 389 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0476 Amo-Chr2 5793675 5798407 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0476 6 1051 Primary Pumps ATPases(2) AT4G00900 79.238 0.0 1718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0476 K01537 - gmx:100792952 1892.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0130 12 1924855 1929539 Amo02g0476 02 5793675 5798407 hybridization