Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0455 ATGCAAATTGTAGAGAGAATATATAGCTATATATATGATAAGGTTTGCTGTGTCTTGTACTTTTTCATTAAGATTAAACAAAATATTAAAAGGGACAAATCTCGAATTGAAAAATCAGAGAACCAACAGAAAGTTAAGATGTCTTATGAAGCTATCTCATACTTCTACCTGTTCTTGTTTAGGGGTAAAATTTTCACTTTTTACATATATAGAATTAGAAAGAAAACGAATCTGGATGCAATGGATGTTGATTCGGAACCACTTAATTCACAAGACAACGTTGAAGATTGCTTGATGACTGGTGTGGAAGAGAATGTAAATTGCACTTGTGATTGCGGTGACAGCAGTAGCAAGTTTGTTGTTGTGACGGCCGATGATATTATAAACCAAACATTTGAAATATCGGATGCAACTTATTACTTGTATGTGCGTTATGCAAGGTGTGTCAGGTTTAGAGTTCGCAAGGGTGATACAGCGCGTGGAAAATATGGAACACAACGCAGAAGGCAATTTTTTTGCAACAAAGAAGGAAAGAGAGCCGATAAACATATCTCTAATTTGAACAAGAAGAGGGAGCATAAAGCACTGACTCGTACGGGTTGTGAAGCCCTGCTTGCGGTACACAACGAATTAGTTTCTCAATTTAAGACGGTGTACGGAGAGCCTATGTTAACAACTCGCTTAGCTGCATTGGAGCTTTGTGCTGTAAATTTTTACACATGGGAGATGTTTGGCAAAGTAAAAACAGAAATTGAAGGAGTGGTTGCATTAGATGTTATAAATGAGGAAAATATATCAACTATTGTTGTGTTAAAAGTTAAGGAGTGTGATAGAGGGCAACAATATACACCGTACTTTATGAGCACAACACCAAGAATATGGAGTGTGAATGTAGTAGGTGGAGTAGTGAAGGCATTCCTTGTAGCCACATGTTTTGTGCCATGA 945 0.3714 MQIVERIYSYIYDKVCCVLYFFIKIKQNIKRDKSRIEKSENQQKVKMSYEAISYFYLFLFRGKIFTFYIYRIRKKTNLDAMDVDSEPLNSQDNVEDCLMTGVEENVNCTCDCGDSSSKFVVVTADDIINQTFEISDATYYLYVRYARCVRFRVRKGDTARGKYGTQRRRQFFCNKEGKRADKHISNLNKKREHKALTRTGCEALLAVHNELVSQFKTVYGEPMLTTRLAALELCAVNFYTWEMFGKVKTEIEGVVALDVINEENISTIVVLKVKECDRGQQYTPYFMSTTPRIWSVNVVGGVVKAFLVATCFVP* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0455 314 Pfam FAR1 DNA-binding domain 141 215 IPR004330 -
Amo02g0455 314 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 80 207 - -
Amo02g0455 314 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 80 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0455 Amo-Chr2 5612198 5614851 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo02g0455 FAR1 6e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0455 - - ahf:112730498 233.802