Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0448 ATGGCTACACAAGTTTTTCTCCCTTTGTGGTTCTTCTCTATGATCACATATTTCCTTTCAACAAAGGCTACTATTGATAACTACATCATCCATATGGATTTATTAGCCATGCCTAAAGCCTTCTCTAGCCACCATAATTGGTACAAAGCTACCCTTTCATTGGCAATGAAAAATGACCATAATACCCCTCTTCCCTCTAATAAGCTAATCTATTCCTACAAAAATGTCATGAATGGTTTTAGTGCAAGTTTGACACCTCAAGAGCATGAACTCATCAAAGCCTCACCAGGTTACATTTCTTCAATTCTTGATGCCCAAGTCAAACTCCACACAACACACACTCCAAAATTCCTTGGCCTTAATCCAAGTTTTGGTGCATGGCCTAATTCACAATATGGCAAAGATGTAATTATTGGTTTGGTGGACACTGGGGTTTGGCCAGAAAGTGAGAGCTTCAAAGATAATGGTGGATTCACCAATGTCCCTTCAAGATGGAAAGGTCAATGTGAGAATAGCATCCATTTCAACTCATCAAATTGCAACAAGAAACTCATTGGTGCTAAGTTCTTTAACAAAGGGTTGATTGCAAAGAACCCTAAGATCAAGAAGATATCCATAAACTCTACCCGTGACATTGAAGGCCATGGTACTCATACCGCATCGACTGCTGCCGGTAGCAGAGTTTATAATGCATCATACTTTGGGTATGCAACTGGAACAGCCACAGGAACAGCACCAATGGCACGTTTGGCTGTGTACAAGGCCTTATGGGAAGAAGGTGCTGTCTCTTCAGACATAATTGCAGCCATTGATAGTGCAATTGAAGATGGTGTTGATGTTCTTTCACTCTCATTTGGTTTTGATCGTACGCCTTTGTACACTGACCCTGTTGCAATAGCCACGTTTGCAGCCGTGGAGAAAGGCATATTTGTTACCACTTCTTCAGGGAACGATGGACCTTTCCTTGGAACACTTCACAATGGAACACCTTGGGTTATAACCGTTGCTGCTAGCACTGTGGACCGTGAGTTTCACGGAACAATAACATTAGGCAACGGTGTTGAAATTACCGGATTGTCCCTCTATCCGGGTCCTGATGTAATTAGCCACACTTCAATAGTGTACGACATGGCGTTTTGCAACGACACTAATGAGCTACACAAAGTTAAGGACAAGATTGTTGTGTGTGAGGAAAATGGATTAGTCTCTCTTGATGATCAATTTTTCAAGGTTGAAAATTCGAAAGTGTTTGGTGCTGTGTTCATAACAAATAGTAGTGACATCTTGTTCTACTTACAAAGCAGTTTCCCAACACTTTTTGTTAATCCCATGAATGGTAAGATTATTAAGGATTACATTAAGGTTGGTGGCAATGGTTCAAAAGCTAGCATGTCTTTTAAGGAAACAATTTATGGTACAAAACCAAACCCTAGTGTTGATAGTTATAGTTCTAGAGGGCCATCGTATAGTTGTCCAAATGTTCTGAAACCGGACATAGCGGCTCCCGGAACGTTGATCTTGGCGGCGTGGCCGTATGCGACTCCGGTTGCGCAATTGGGATCCAAAAACCTTCTGAGCAATTTTAATCTGTTAACTGGAACATCAATGGCATGTCCTCATGTTGCCGGCATAGCTGCCCTTCTTAAGGGTGCATACCCTCAATGGGACCATTCAGCAATAAGGTCGGCAATAATGACAACTTCGGATATATTGGACAACACAATGAAACACATCAAAGACCTTGGCAATGGTAAGAAAGCAACTCCTCTAGCCTTAGGAGCTGGTCATGTCAACCCAAATAAAGCACTTGACCCTGGCCTAGTTTACAATCTTGAGGTGCAAGATTATGTGAACCTTCTTTGTGCAATGAAGATGACACAAAAAGAGATCAAAGCAATCACAAGAAGATCTTCATACAATTGCCCTAAAAACCCTAAATTGGATCTTAATTACCCTTCTTTCATTGCTTACTATAATGGAAAGAAGCCTTCTTCTAATAATGAGTCAAAGACATTAGTTCATGAATTTCATAGAACAGTTACCAATGTTGGGGAGGGACATGCTATCTATGTTGCTAGTGTTACACCAATAAAAGGGTTCCACGTCAGCGTGGTCCCGGAAAAGTTGGTGTTCAAGATGAAGAATGAGAAGCAAAGTTACAAGTTGAGGATTGAAGGTCCAAAATTGATGAAGAAGCAAATTGATTTTGGGTATCTAAGTTGGACCGATTTGAAGCATGTTGTGAGAAGTCCTATTGTGGTCACAAGTCTACCCTCCACTTAG 2283 0.4117 MATQVFLPLWFFSMITYFLSTKATIDNYIIHMDLLAMPKAFSSHHNWYKATLSLAMKNDHNTPLPSNKLIYSYKNVMNGFSASLTPQEHELIKASPGYISSILDAQVKLHTTHTPKFLGLNPSFGAWPNSQYGKDVIIGLVDTGVWPESESFKDNGGFTNVPSRWKGQCENSIHFNSSNCNKKLIGAKFFNKGLIAKNPKIKKISINSTRDIEGHGTHTASTAAGSRVYNASYFGYATGTATGTAPMARLAVYKALWEEGAVSSDIIAAIDSAIEDGVDVLSLSFGFDRTPLYTDPVAIATFAAVEKGIFVTTSSGNDGPFLGTLHNGTPWVITVAASTVDREFHGTITLGNGVEITGLSLYPGPDVISHTSIVYDMAFCNDTNELHKVKDKIVVCEENGLVSLDDQFFKVENSKVFGAVFITNSSDILFYLQSSFPTLFVNPMNGKIIKDYIKVGGNGSKASMSFKETIYGTKPNPSVDSYSSRGPSYSCPNVLKPDIAAPGTLILAAWPYATPVAQLGSKNLLSNFNLLTGTSMACPHVAGIAALLKGAYPQWDHSAIRSAIMTTSDILDNTMKHIKDLGNGKKATPLALGAGHVNPNKALDPGLVYNLEVQDYVNLLCAMKMTQKEIKAITRRSSYNCPKNPKLDLNYPSFIAYYNGKKPSSNNESKTLVHEFHRTVTNVGEGHAIYVASVTPIKGFHVSVVPEKLVFKMKNEKQSYKLRIEGPKLMKKQIDFGYLSWTDLKHVVRSPIVVTSLPST* 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0448 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 110 IPR037045 -
Amo02g0448 760 Gene3D - 341 471 - -
Amo02g0448 760 ProSiteProfiles Serine proteases, subtilase domain profile. 106 603 - -
Amo02g0448 760 SUPERFAMILY Subtilisin-like 109 607 IPR036852 GO:0004252|GO:0006508
Amo02g0448 760 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.9 19 757 - -
Amo02g0448 760 Gene3D - 620 757 - -
Amo02g0448 760 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Amo02g0448 760 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Amo02g0448 760 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Amo02g0448 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 757 IPR045051 -
Amo02g0448 760 Pfam Subtilase family 133 579 IPR000209 GO:0006508|GO:0008236
Amo02g0448 760 Pfam Peptidase inhibitor I9 28 110 IPR010259 -
Amo02g0448 760 CDD PA_subtilisin_like 347 458 - -
Amo02g0448 760 CDD Peptidases_S8_3 107 569 IPR034197 -
Amo02g0448 760 Pfam Fibronectin type-III domain 648 754 IPR041469 -
Amo02g0448 760 Gene3D Peptidase S8/S53 domain 135 616 IPR036852 GO:0004252|GO:0006508
Amo02g0448 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 533 543 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0448 Amo-Chr2 5519607 5523713 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0448 1 757 Subtilisin-like Serine Gene Family AT5G67090 45.700 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0448 - - gmx:100783026 917.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0660 19 10170256 10171967 Amo02g0448 02 5519607 5523713 hybridization