Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0434 ACCATTGGCGAGGGAAGCTTTGCGAAGGTCAAAATTGCAAGAAACGTTGATAATGGCCAAAGTGCTGCCATTAAGATCCTCGTCAAAAACCAGATTGTGAAACATCCTAGGATGATGGAACAGCTGAAGAAGGAAATCTCTACGATGAAGATGGTCCAACATCCGAACGTGATCAAAATTTATGAGGTGATGGCAAGCAAAACAAAGATTTACATTGTCTTAGAGTTGATCAAGGGAGGAGAACTGAAAATTGCCAGAAAAGGGAGACTAGAAGAAAATGAAGCAAGAAGCTATTTTCATCAATTAATCAATGCAGTTGATTATTGCCACAGTAGAGGAGTTTATCATAGAGATTTGAAGCCTGAAAATCTTCTTCTGGACAAAAATGATATTCTTAGAGAGGATAAACTTCTGCACACTACCTGCGGAACCCCTAATTATGTTGCACCTGAGGTGATCCATAATGGAGGTTATGATGGTTCTGCAGCTGATATATGGTCTTGTGGAGTCATTCTCTTTGTACTCATGGCTGGATACTTGCCTTTTGATGAACCAAATCAAATTGCACTCTTCAGAAAAGCTGAGTATGTTTTTCCACCGTGGTTTTCCAAGGAGGCAAAGAAACTACTAAGTCGCATTCTTGATCCAAACCCTCTCACAAGGATAAAAATTTCAGAAATATTACAAGATGAATGGTTTAGAAAAGGATACAAACCACCAATATTTAAAGAGGAAGAAGAAATAAATACAGACGATGTGACTGCTGCTTTTGATGATTCCAGGGAAAATCTGGTGACAGAGACAAAAGAGAAACCGGCCTCACTGAACGCTTTTGAGCTCATTTCAAGATCAAAGACCTTTAACCTTGGAAGTATGTTTGAGCAGAAATCACTAGGAATGGTAAAGAGAGAAACACATTTTACCTCACAGTGCCCTCCAAATGAAATTATGTCTAAAATTGAGGAAGCTGCCAAGCCTCTTGGATTCAATGTTCACAAGCACAATTATAAGATGAAGTTGCAAGGTGATAAGAGTGGAAGGAAGGGTCACCTTTCAGTGGCTACTGAGGTTTTCGAGGTAGCACCCTCCTTGCACGTGGAATTGCGAAAAACAGGGGGAGATACATTGGAGTTTCACAAGGCATGTGTTTAA 1152 0.3993 TIGEGSFAKVKIARNVDNGQSAAIKILVKNQIVKHPRMMEQLKKEISTMKMVQHPNVIKIYEVMASKTKIYIVLELIKGGELKIARKGRLEENEARSYFHQLINAVDYCHSRGVYHRDLKPENLLLDKNDILREDKLLHTTCGTPNYVAPEVIHNGGYDGSAADIWSCGVILFVLMAGYLPFDEPNQIALFRKAEYVFPPWFSKEAKKLLSRILDPNPLTRIKISEILQDEWFRKGYKPPIFKEEEEINTDDVTAAFDDSRENLVTETKEKPASLNAFELISRSKTFNLGSMFEQKSLGMVKRETHFTSQCPPNEIMSKIEEAAKPLGFNVHKHNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHVELRKTGGDTLEFHKACV* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0434 383 Gene3D Phosphorylase Kinase; domain 1 1 76 - -
Amo02g0434 383 Pfam NAF domain 272 333 IPR004041 GO:0007165
Amo02g0434 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Amo02g0434 383 SUPERFAMILY Protein kinase-like (PK-like) 2 244 IPR011009 -
Amo02g0434 383 Gene3D Kinase associated domain 1, KA1 269 383 - -
Amo02g0434 383 Gene3D Transferase(Phosphotransferase) domain 1 81 263 - -
Amo02g0434 383 CDD CIPK_C 276 382 - -
Amo02g0434 383 ProSiteProfiles NAF domain profile. 270 294 IPR018451 GO:0007165
Amo02g0434 383 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 1 380 - -
Amo02g0434 383 ProSitePatterns Protein kinases ATP-binding region signature. 2 25 IPR017441 GO:0005524
Amo02g0434 383 Pfam Protein kinase domain 2 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0434 383 PANTHER - 1 380 - -
Amo02g0434 383 SMART serkin_6 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0434 383 ProSiteProfiles Protein kinase domain profile. 1 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0434 Amo-Chr2 5370219 5382135 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0434 1 382 CBL-interacting serine-threonine protein kinases AT1G01140 67.742 0.0 559
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Amo02g0434 Pkinase 1.2e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0434 - - lja:Lj3g3v2483040.1 593.964