Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0411 AACACAAAACACACAAGTCTTCGCGTTCTTACAGTCCAAGTCTTCGCTCAATCAAGCTTGGAAAATTTTTGCCATTCCTTCTTTGACCCGTTCCTTCAAATTTCTCTTTCTCTCTCTCCCCAAATTCACAACCACAATATCATCGCAACAAAAGAACTCAGAGCTCAAAAGAGGCAAGGCTTCATGGGTTTTCCTCAGATGGGTTGTTCAAATTACCAGGATCTTTGGTTGAAGATGGTTCTTAGTGTTGTTTTTGGTTTCTTGATGCTGATTAGTAGTTTTGGAACCGCACATGGCACTGATACTGATATCTTCTGCTTGAAGAGTATCAAGGGATCCATTGAAGATCCTTACAACTATTTGCAATCTTGGACTTTCAATAACAAAACCGAAGGGTCTATATGTAAATTCAGTGGGGTTGAGTGTTGGCACCCTGATGAGAACAGGGTCTTGAATCTCAAGCTCTCAAATATGGGGCTAAAGGGTCAGTTTCCCCGTGCCATTCGGAACTGCTCGAGTTTGACAGGGTTGGATCTTTCAATCAACAAGCTATCCGGAACGATTCCGGCGGATATATCCTCTCTTCTGACTTATGTGGTCACTCTTGATCTGTCATCAAATGAATTCTCCGGCACAATACCCGAAAGCCTTGCGAATTGTACCTATCTTAATTCCCTTAAACTTGATTCTAATAGGCTTACTGGTCAAATTCCGGGACAATTCGCCAGCCTCGGACGGCTCAAGACATTCAGTGTAACTAACAATCTTTTGTCCGGGCCAGTTCCAAACTTTAATTCTACTAAAGTGACGGCTTCATATGGAAACAATATAGGCCTATGTGGAGGAACTAACTTGGGAAATTGTCAGCCCCAGTCTTCCAAGAGTAACACTGCAGTCATAGCCGGAGCAGCCGTTGGTGGGGTGACTGTTGCGGTGTTAGGATTGGGCATTGGAATGTTCTTCTATGTGCGCCGTGTCGGTTACAAGAGGAAGAAGGAAGAGGACCCCGAAGGAAACAAATGGGCGAGAAGTATAAAGGGAACCAAAGCAATAAAGGTTTCTTTGTTTGAGAAATCAGTTTCAAAAATGAAAATGAGTGATCTCATGAAGGCTACTAACAAGTTCAGTAACACCAATATCATCGGATCAGGACGAACGGGAACTGTTTACAAAGCTGTTCTTGAGGATGGCACATCACTTATGGTTAAGAGGTTGCAGCAATCCCAGCACTCTGAGAAAGAATTTAGGTCCGAGATGGCTACACTCGGGTCGGTCAAGCACCGAAACCTGGTTCCTCTCTTAGGATTTTGCATGGCCAAAAAGGAGAGGCTTGTGGTGTATAAAAATATGCCAAATGGAAACCTCTATGATCAGCTACATCCGGCCGAAGGTCCAAGCTCCCTTGACTGGACTCTAAGGCTCAAAATTGCAATTGGAGCTGCCAAAGGATTAGCATGGCTTCATCATAGCTGCAATCCCCGAATCATCCACCGAAACATAAGCTCTAAATGCATACTCTTGGATGCTGATTTCGAGCCCAAAATCTCCGACTTCGGCCTTGCCAGACTGATGAATCCTATAGATACACATTTAAGTACTTTCGTCAACGGCGAGTTTGGAGACTTAGGATATGTTGCTCCAGAGTACACAAGAACCTTAGTTGCTACACCAAAGGGAGATGTTTATAGCTTTGGCACTGTGCTTCTCGAGTTGGTAACCGGCGAAAGACCTACCAATGTGGCTAAAGCTCCAGAAACATTCAAAGGGAATCTGGTGGAGTGGATTATGCAGCTCTCTAGCAACTCTCAACTCCATGACGCCATCGATGAGTCTCTAGCTGGAAAGGGAGTTGACAACGAGCTCTTCCAATTTCTGAAGGTTGCTTGTAACTGTGTTTCTTTAACTGCAAAGGAGAGACCAACCATGTTTGAAGTGTATCAGTTTCTAAGAGCAATTGGGAGTAGGTACAATTTCACTACTGAGGATGAGATTTTGATACCTGTAGATATTGGCACTGCTGATAACATGGAGGAACTTATTGTTGCTAGAGAAGCATTTGATGATTGA 2067 0.4378 NTKHTSLRVLTVQVFAQSSLENFCHSFFDPFLQISLSLSPQIHNHNIIATKELRAQKRQGFMGFPQMGCSNYQDLWLKMVLSVVFGFLMLISSFGTAHGTDTDIFCLKSIKGSIEDPYNYLQSWTFNNKTEGSICKFSGVECWHPDENRVLNLKLSNMGLKGQFPRAIRNCSSLTGLDLSINKLSGTIPADISSLLTYVVTLDLSSNEFSGTIPESLANCTYLNSLKLDSNRLTGQIPGQFASLGRLKTFSVTNNLLSGPVPNFNSTKVTASYGNNIGLCGGTNLGNCQPQSSKSNTAVIAGAAVGGVTVAVLGLGIGMFFYVRRVGYKRKKEEDPEGNKWARSIKGTKAIKVSLFEKSVSKMKMSDLMKATNKFSNTNIIGSGRTGTVYKAVLEDGTSLMVKRLQQSQHSEKEFRSEMATLGSVKHRNLVPLLGFCMAKKERLVVYKNMPNGNLYDQLHPAEGPSSLDWTLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDVYSFGTVLLELVTGERPTNVAKAPETFKGNLVEWIMQLSSNSQLHDAIDESLAGKGVDNELFQFLKVACNCVSLTAKERPTMFEVYQFLRAIGSRYNFTTEDEILIPVDIGTADNMEELIVAREAFDD* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0411 688 ProSiteProfiles Protein kinase domain profile. 375 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0411 688 PANTHER LRR RECEPTOR-LIKE KINASE 84 664 - -
Amo02g0411 688 Gene3D Phosphorylase Kinase; domain 1 336 448 - -
Amo02g0411 688 Pfam Leucine rich repeat 200 257 IPR001611 GO:0005515
Amo02g0411 688 SUPERFAMILY L domain-like 101 266 - -
Amo02g0411 688 Gene3D Ribonuclease Inhibitor 101 290 IPR032675 -
Amo02g0411 688 PANTHER RECEPTOR-LIKE PROTEIN 55 84 664 - -
Amo02g0411 688 CDD STKc_IRAK 381 649 - -
Amo02g0411 688 SUPERFAMILY Protein kinase-like (PK-like) 354 649 IPR011009 -
Amo02g0411 688 Gene3D Transferase(Phosphotransferase) domain 1 450 666 - -
Amo02g0411 688 Pfam Protein tyrosine and serine/threonine kinase 378 648 IPR001245 GO:0004672|GO:0006468
Amo02g0411 688 Pfam Leucine rich repeat N-terminal domain 101 143 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0411 Amo-Chr2 5109729 5112774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0411 87 675 Receptor kinase-like Gene Family AT3G28450 46.037 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Amo02g0411 PK_Tyr_Ser-Thr 3.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0411 - - gmx:100801294 940.258