Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0406 ATGGCTGGTGTAGTTGTTGGTGGAGCTTTGCTCTCTGGATTCATTAACATTGTCATTAACAAGTCCCTTAGAGAGGATGTGGTCAACCGGGTCTTGGGCAAGAAACTTGGCCCTGGCTTGGTTGAGAGGCTGAAAATTTCTCTGCATGCTGCTGAAGCTGTGCTTGATGACGCTGAGTACAAGGAACTGGGCCACAAAGGTGTGAGGGATTGGCTCAACTGTCTGAGAGATGCTGTTTATGATGCTGATGACTTTCTGGACGCTGTCCTCACCAAAGCCGCCACTAAAAAGGAGGTACGTTCTGTCTTGCCTAGTTTCTTCCTCAACCGACATAGGAAGATGGTAGATAACATGGAAGGGGTGGTTGCAAGAATAGAATTTCTTGTAAGTCAAAAAGATAACCTTGGTCTTCAAAAGACTACCAAGGATAATAACTTGTCATCATCATCATGGCGAGAAACCACATGTAAGATGGAAGGGAGCATATATGGCAGGGAGGATGATCAACAAGCTTTAATCAAAATAATACATGACAACAGTGAATCTCAGTTATATGTGATTCCTATTGTTGGCATGGGTGGGGTTGGTAAAACAACCTTAGCCAAATGGGCGTACAGTGTCGCGGAGGGATTTGATCTCAAAGCATGGGTCTGCATCTCTGAAACATTTGATGTTGCTGAGAATACAAGGAAAACCATTGAGGAACTTACTGAAAATTCTTGTACCCTTCGGAGTTTAAATTTGCTTCAAAATGAATTGCAGAAAATCTTGTCGAGAAAGAAGTTCTGTATTGTTCTAGACGATGTCTGGAGCGATGATGCCGATAAGTGGAAGCAATTTATAACTCCTTTTTGCTGTGGGGTTAAGGGTAGTACAATTCTTCTAACAACTCGCAATCAAGAGGTTGCTTCAGTAGTTAAAACATGTCCCTCTTTCATTCTTAATGAGTTGTCCGAAAAGTATTGTTGGTTATTGTTTGCAGCCAATGCATGTTTTCCGGAGTCAAACGGTAATCCAACATTAGAGGAAATCGGTAAAAAGATTGTCAAGAAGTGTAAAGGGTTGCCATTAGCGGTAGCAACACTTGGGCGCTTGTTGCAAGGAAAGGATGATGCTAAAGAATGGAATGCTGTTTTAAGGGATGACATCTGGGAATTTTCTATGAAAGATAGTAAAATTATGCCAGCATTGTTAATAAGCTACTTCCACTTACCTCCTTACTTGAAGCGTTGTTTCGTTTATTGTTCATTGTTTCCCAAGGATCATTACTTTAAGAAAAATGAACTAGTTTTGCTGTGGATGGCTGAAGATCTTTTAAGGGTACCAAAGAGAGGAGAGAGTTTAGAAGAGGTTGCTTCTGAGTGTCTTGAAGAATTATCTTCAAGGTTATTTTTTAAACCATATAAGTTTTCCTTGCATGATCTCTTGCTGGAGACGTACATGATGCATGATCTCTTGCATGACATGGCAGTATTCCTTGCTGGAGACTTCTATTATAGAATAGAAGAACTTGGTGAACAAGAAAAGAAGGTTCTCACTCGGCATTTGTCACATTTGCCATATGGAAGCTTAGATCGTCCAAACTCAAAAGTCTTTAAGTTCGATATGAAATTAGAATCTTTGAGGACATCATTGTATATTGATGATTTGTTAAGCAAGAAAAGCAGAGCATCAAAGTTGAAATACTTGAGAGTTTTATCCTTTCGTGAACTTGATGCATTACCAGGTTCAATAGGTGAATTGATTCATCTACGCTATTTGAATCTCTCTTGGACCGAGGTGAAGACATTACCAGAGTCAATATGCAACTTGTATAATCTACAAACATTAATATTGTATAGATGTTCTTACCTGACCATGTTGCCCAAGGGCATGCATAAACTTGTGAATTTACGGCATCTTGATCTTAGGGGAACTTGTTTGAAAGAAATGCCTAGAGGAATAAGTAAATTGAAACACTTGCACACCTTAAGTTCGTTTGTGGTGGGCAAGCACAAAGACAATGGAATCCAGGAATTAGGAGGGCTCTCAAATCTTGAAGGATCATTTGAGATTAAGAAGTTGGAGAATGTTGCTGATGCCGCACAAGCAAGGAGTGCTAAGATGGAGGACAAGAACCACATTGACAAGTTATGGTTGGAATGGTCTTCAGATGATGAAATGGTTTCAAACACAGAGACTGAGAGAGATATACTCGTCGGCTTGCAACCGCACAATGGCTTGAAAGAGTTGACCATCAAGGGATACATGGGCGAAAGATTTCCAGATTTGGTGGGGCACTATTCTTACAACAATATGACACGTGTATCTCTAGAGTCTTGCAAGAATTGCTACATGCTGCCTTCACTTGGACAACTGCCATCTCTTAAGTCCCTCCTCATTGAAGGTTTTGATCAGCTCAAGCGTATTGGTGATGAGTTTTACAGCAATCATCATTCTTCGCCTACACCGTTTCCCTCACTCGAGAATTTGGTGTTTAATATCATGCCATGCTGGGAGGAGTGGCACGTACCTGACCCAAAATCTTTTCCTCAGCTTAAGAAACTTTGA 2550 0.4063 MAGVVVGGALLSGFINIVINKSLREDVVNRVLGKKLGPGLVERLKISLHAAEAVLDDAEYKELGHKGVRDWLNCLRDAVYDADDFLDAVLTKAATKKEVRSVLPSFFLNRHRKMVDNMEGVVARIEFLVSQKDNLGLQKTTKDNNLSSSSWRETTCKMEGSIYGREDDQQALIKIIHDNSESQLYVIPIVGMGGVGKTTLAKWAYSVAEGFDLKAWVCISETFDVAENTRKTIEELTENSCTLRSLNLLQNELQKILSRKKFCIVLDDVWSDDADKWKQFITPFCCGVKGSTILLTTRNQEVASVVKTCPSFILNELSEKYCWLLFAANACFPESNGNPTLEEIGKKIVKKCKGLPLAVATLGRLLQGKDDAKEWNAVLRDDIWEFSMKDSKIMPALLISYFHLPPYLKRCFVYCSLFPKDHYFKKNELVLLWMAEDLLRVPKRGESLEEVASECLEELSSRLFFKPYKFSLHDLLLETYMMHDLLHDMAVFLAGDFYYRIEELGEQEKKVLTRHLSHLPYGSLDRPNSKVFKFDMKLESLRTSLYIDDLLSKKSRASKLKYLRVLSFRELDALPGSIGELIHLRYLNLSWTEVKTLPESICNLYNLQTLILYRCSYLTMLPKGMHKLVNLRHLDLRGTCLKEMPRGISKLKHLHTLSSFVVGKHKDNGIQELGGLSNLEGSFEIKKLENVADAAQARSAKMEDKNHIDKLWLEWSSDDEMVSNTETERDILVGLQPHNGLKELTIKGYMGERFPDLVGHYSYNNMTRVSLESCKNCYMLPSLGQLPSLKSLLIEGFDQLKRIGDEFYSNHHSSPTPFPSLENLVFNIMPCWEEWHVPDPKSFPQLKKL* 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0406 849 Coils Coil 41 61 - -
Amo02g0406 849 Gene3D - 316 399 IPR042197 -
Amo02g0406 849 Coils Coil 685 705 - -
Amo02g0406 849 PANTHER OS05G0414200 PROTEIN 40 849 - -
Amo02g0406 849 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 415 IPR027417 -
Amo02g0406 849 PANTHER DISEASE RESISTANCE PROTEIN RP 40 849 IPR044974 GO:0006952
Amo02g0406 849 Gene3D - 400 491 IPR036388 -
Amo02g0406 849 Pfam Rx N-terminal domain 40 98 IPR041118 -
Amo02g0406 849 Gene3D - 143 313 IPR027417 -
Amo02g0406 849 Pfam NB-ARC domain 166 380 IPR002182 GO:0043531
Amo02g0406 849 PRINTS Disease resistance protein signature 186 201 - -
Amo02g0406 849 PRINTS Disease resistance protein signature 256 270 - -
Amo02g0406 849 PRINTS Disease resistance protein signature 352 366 - -
Amo02g0406 849 PRINTS Disease resistance protein signature 602 618 - -
Amo02g0406 849 SUPERFAMILY L domain-like 482 849 - -
Amo02g0406 849 Gene3D Ribonuclease Inhibitor 533 849 IPR032675 -
Amo02g0406 849 Gene3D - 30 126 - -
Amo02g0406 849 SMART LRR_typ_2 628 651 IPR003591 -
Amo02g0406 849 SMART LRR_typ_2 581 604 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0406 Amo-Chr2 4980299 4982848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0406 187 374 WRKY Transcription Factor Family AT5G45050 29.557 2.60e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0406 - - ahf:112726314 1342.79