Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0403 ATGGCTAGTGTAGTTGGTGGAGCTTTCCTCTCTGGCTTTATTAGCATTGTCATTAACAAGTCCCTTAGAGAGGATGCGGTCAACCAGGTCTTCGGCAAGAAACTTGGCCCTGGCTTGGTTGAGAGGCTGAAGATTTCACTGCTTGCTGCCGAAGCTGTGGTTGATGATGCTGAGTACAAGCAACTGGGCGATGATCGTGTGAGGGATTGGCTCAACAGTCTGAGAGATGCTGTTTATGATGCTGATGACTTTCTGGACGCTCTACTCACCAAAGAAGCAACTCAAAAGGAGGTACGTTCTGTCTTACCTAGTTTCTTCCTCAACCGACATAGGAAGATGGTAGATAACATGGAACGGGTGGTTTCAAGAATAGAATTTCTTGCAAGTCAAAAAGATATTCTTGGTCTTCAAAAGAGTACCAAGGATAGTAACTTGTCATCATCATCGTCGTCATCATGGCGAGAAACCACATGTCTGATGGAAGGGAACATATATGGCAGGGAGGATGATCAACAAGCTTTAATCAAAATAATAAATGACAACAGTGAATCTCAGTTATCTGTGATTCCTATTGTTGGCTTGGGTGGGGTTGGTAAAACAACCTTAGCCAAATGGGCGTTCAGTGTCGTGAAAGGATTTGATCCGAAAAAAGCATGGGTCTGCATCTCTGAAACATTTGATGTTGCTGAGATTACAAGGAAAACCATTGAGGAACTTGCTAAAAATTCTTGCTCTCTTCGGAGTTTAAATTTGCTTCAAGATGAATTGCAGAAATTCTTGTTTGGAAAGAAGTTCTTTATTGTTCTAGACGATGTCTGGAGCGATGATGCCGATAAGTGGAAGCAATTTATAACTCCTTTTCACTGTGGGGCTAAGGGTAGTACAATTCTTCTAACAACTCGCAATCAAGAGGTTGCTTCAGTAGTTCAAACATGTCCCTCTTGCACTCTTAATGAGTTGTCCAAAGAGTCTTGTTGGTTATTGTTTGCAGCCAATGCATGTTTTCCGGAGTCAAATGGGAAGCCAACACTAGAGGATATCGGTAGACAAATTGTCAACAAGTGTAAGGGCTTGCCATTAGCTGTAGAAACACTTGGCCGCATGTTGCGAGGAAAGGATGATGCCGAAGAATGGAAAGCTGTTTTAAGGAGTGCCATCTGGGAATTTTTCGTGACAAATTGTAAAATTATTCCGGCATTGTTAATAAGCTACTTCCAGCTACCTTCTTACTTGAAGCGATGTTTCGTTTATTGTTCATTATATCCCAAAGGTTATGATTTTATTAAAAATCAACTAATTTTGATGTGGATTGCTGAAGATCTTTTAAGGCTACCAAAAAGAGGAGAGAGTTTAGAAGAGGTTGGTTGTGAGTGTTTTGAAGAATTAACTTCCAGATTATTTTTTAAACCAGCGGATCATCCTCGTGAAAGGTATGTGATGCATGATCTCTTGCATGACTTGGCAATATTCCTTGCTGGAGACTTCTATTCTACAATACAAGAGCTTCGTGAACAAGAAGAGAAGAAGGTTCTCATTCGTCATTTGTCACATGTGGGAAGCTTAGATCATCCAATCTCAAAAGTCTTCAAGTCCATTGTGAAACCAGAATCTTTGAGGACGTTGTTGTATATCGATGATTTGTTAAGCAAGAAAAGCAGAGCATCAAAGTTGAAATACTTGAGAGTTTTATCCTTTCGTAAACTTGATGTATTACCAGATTCAATAGGTAAATTGCTTCATCTACGCTATTTGAATCTCTCTGGGACCGATGTTAAGACATTACCAGAGTCATTATGCAACTTGTATAATCTAAAAACATTAATGTTGTATGAATGTTCTAATCTGACCATGTTGCCCAATGGCATGCATAAACTTGTGAATTTACGGCATCTTGATCTTAGGGGAACTTCTTTGAAAGAAATGCCTAGAGGAATAAGTAAATTGAAAGTGCCTATTTTAGATTACTTTGTGGTGGGCAAGCACAAAGACAATGGAATGGAGGAATTAGGAGGGCTCTCAAATCTTGAAGGATCATTTGAGATTAACAAGTTGGAGAATGTTGCTGATGTCAGACAAGCCAGGAGTGCAAGGATATTGGAGAAGAACCACATTGACAAGTTATTGTTGGAGTGGTCTTGGGGTCATGAGATAGTTTCAAACACAGAGACTGAGAGAGATATACTCGACTGCTTGCAACCGCACCATGGCATGAAAGAGTTGACAATCGTGGGATACATGGGCGAAAGATTTCCAGATTGGGTTGGACACTGTTCATACAACAATATGACAAGTGTAACACTAGCATATTGCAAGAATTGCTGCATGCTGCCTTCACTTGGACAACTGCCATCTCTCAAGTCCCTGCGCATTGAAGGTTTTCTTGAGCTCAAGCGTATTGGTGATGAGTTTTACAAGAATGACAGCGATCATCATTCTTTGCCTATTGCTCCATTTCCTTCACTCGAGAAATTGGTGTTTGATAAGATGCCATGCTGGGAGGAGTGGCACGTACCTGACCCAGAAGCGTTTCCTCAGCTTAAGATACTTCAAATAGAACGTTGTCCAATGTTAAAGGGAGATATGCTTAATGGCATATTGTGGAGAAGGGATTGTTGTTTGCGGGAAGATGATGAAGGAAGGTCTGATGACGAGATGGTAGGTGGTGGGGATGCTTTATCAATAAGGCCATCTCAATCATTTAATGCAACCACCATCAACCATTTATGTTGCCTCCAAGAACTACGTATTTTTGGGTGTCCGTCTATTGTATCCTTGTCGTTGAATGTCTTTCCCAATCTGAAGAATTTGGCGATAGATGGGTGTAGGAATCTGGAATCAGTGTCAATGTCAGAGGCGCCACATGCTGCTCTTCAATGTCTCTCCATCTCTGACTGCTCCAAATTAGTGTCATTTGCAGGAGAAAGACTGGCTGCACCCAACTTGACTCATCTCGAGGTCAGATACTGCTCAAAGTTGGAGGCATTACCACGTGACATGAAGAGTCTACTCCCAACTTTACATACTCTCGAGGTATATCATTGCCCAAACATTTGCATGTCGCCAGAGGGTGGTTTGCCGCCTAACTTGAAAACACTTTTAGTGCTAATTGGCGAGCAACAAATGAGGGATCTATCATGGATGGCCAACTTGCACGCCCTCACTTATCTCAGAATTGAAGGTGATTACTGCGACAACATAAAGTCATACCCAGAGGGTTCGCTGCCTCACCTTCCCTCCCTTACCACTCTTAAGATATGGTTCTTCCATAATCTGGAGACATTGGAGTGCAACGAGCTTCTCCGCCTCACCTCCCTTGAACACTTGCACATTGAGTACTGCGACAAGCTGGAGAATATGGAAGGAGAAAAGCTGCCTCCCTCTCTCTTGCGACTGAGAATTCAAGAGTGTCCTTTGCTGGGAAAATACTGCAAGAACAAGCATCGACATATTTGGCCCAAAATTTCACACATCCCTATCATTCAATTATTTTCTGCCACCATTAAAATGTGCATTGGCGGCCTCTCTGCCAATGGCAAGTTGGTTCTGGTCATTTTCCTGTGTGAGGTCCAAGCCAAAACTTTCTGGAGTGTCTCTACATTCCCATTATGGACGCAACCAATTGAGCAAAGAGAAAAAAAGTTGAGAGGAGATGCTAATTTTGCAGGGGCAATGACTTGTTTTCATAAGTCAAAGATCGGATGGTCGAATTTTATTGAGCTGAATCTTTTACAGAAGGTCTTAAAGAATTTAAACAACAAGGTTCCAAAAAAACTACATGTTCCTACATTTATGTTCCTTACAAGGGATGCACTTGTTGTTTCTGTTCACAGCATGTCTAAGGTTGCAAACAAAGTAAGCATAAGATATTCAACAATGTAA 3879 0.4148 MASVVGGAFLSGFISIVINKSLREDAVNQVFGKKLGPGLVERLKISLLAAEAVVDDAEYKQLGDDRVRDWLNSLRDAVYDADDFLDALLTKEATQKEVRSVLPSFFLNRHRKMVDNMERVVSRIEFLASQKDILGLQKSTKDSNLSSSSSSSWRETTCLMEGNIYGREDDQQALIKIINDNSESQLSVIPIVGLGGVGKTTLAKWAFSVVKGFDPKKAWVCISETFDVAEITRKTIEELAKNSCSLRSLNLLQDELQKFLFGKKFFIVLDDVWSDDADKWKQFITPFHCGAKGSTILLTTRNQEVASVVQTCPSCTLNELSKESCWLLFAANACFPESNGKPTLEDIGRQIVNKCKGLPLAVETLGRMLRGKDDAEEWKAVLRSAIWEFFVTNCKIIPALLISYFQLPSYLKRCFVYCSLYPKGYDFIKNQLILMWIAEDLLRLPKRGESLEEVGCECFEELTSRLFFKPADHPRERYVMHDLLHDLAIFLAGDFYSTIQELREQEEKKVLIRHLSHVGSLDHPISKVFKSIVKPESLRTLLYIDDLLSKKSRASKLKYLRVLSFRKLDVLPDSIGKLLHLRYLNLSGTDVKTLPESLCNLYNLKTLMLYECSNLTMLPNGMHKLVNLRHLDLRGTSLKEMPRGISKLKVPILDYFVVGKHKDNGMEELGGLSNLEGSFEINKLENVADVRQARSARILEKNHIDKLLLEWSWGHEIVSNTETERDILDCLQPHHGMKELTIVGYMGERFPDWVGHCSYNNMTSVTLAYCKNCCMLPSLGQLPSLKSLRIEGFLELKRIGDEFYKNDSDHHSLPIAPFPSLEKLVFDKMPCWEEWHVPDPEAFPQLKILQIERCPMLKGDMLNGILWRRDCCLREDDEGRSDDEMVGGGDALSIRPSQSFNATTINHLCCLQELRIFGCPSIVSLSLNVFPNLKNLAIDGCRNLESVSMSEAPHAALQCLSISDCSKLVSFAGERLAAPNLTHLEVRYCSKLEALPRDMKSLLPTLHTLEVYHCPNICMSPEGGLPPNLKTLLVLIGEQQMRDLSWMANLHALTYLRIEGDYCDNIKSYPEGSLPHLPSLTTLKIWFFHNLETLECNELLRLTSLEHLHIEYCDKLENMEGEKLPPSLLRLRIQECPLLGKYCKNKHRHIWPKISHIPIIQLFSATIKMCIGGLSANGKLVLVIFLCEVQAKTFWSVSTFPLWTQPIEQREKKLRGDANFAGAMTCFHKSKIGWSNFIELNLLQKVLKNLNNKVPKKLHVPTFMFLTRDALVVSVHSMSKVANKVSIRYSTM* 1293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0403 1292 Gene3D Ribonuclease Inhibitor 539 863 IPR032675 -
Amo02g0403 1292 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 418 IPR027417 -
Amo02g0403 1292 PANTHER DISEASE RESISTANCE PROTEIN RP 39 976 IPR044974 GO:0006952
Amo02g0403 1292 Gene3D - 33 133 - -
Amo02g0403 1292 Gene3D Ribonuclease Inhibitor 1003 1150 IPR032675 -
Amo02g0403 1292 Gene3D Ribonuclease Inhibitor 893 1002 IPR032675 -
Amo02g0403 1292 SMART LRR_typ_2 625 648 IPR003591 -
Amo02g0403 1292 SMART LRR_typ_2 578 601 IPR003591 -
Amo02g0403 1292 Gene3D - 149 314 IPR027417 -
Amo02g0403 1292 Pfam NB-ARC domain 168 383 IPR002182 GO:0043531
Amo02g0403 1292 PANTHER OS05G0414200 PROTEIN 39 976 - -
Amo02g0403 1292 Gene3D - 403 489 IPR036388 -
Amo02g0403 1292 Gene3D - 319 402 IPR042197 -
Amo02g0403 1292 Pfam Rx N-terminal domain 38 101 IPR041118 -
Amo02g0403 1292 SUPERFAMILY L domain-like 474 969 - -
Amo02g0403 1292 PRINTS Disease resistance protein signature 188 203 - -
Amo02g0403 1292 PRINTS Disease resistance protein signature 355 369 - -
Amo02g0403 1292 PRINTS Disease resistance protein signature 259 273 - -
Amo02g0403 1292 PRINTS Disease resistance protein signature 599 615 - -
Amo02g0403 1292 SUPERFAMILY RNI-like 905 1143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0403 Amo-Chr2 4950012 4966738 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0403 189 642 WRKY Transcription Factor Family AT5G45050 23.926 6.68e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0403 - - ahf:112726314 1776.91