Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0402 ATGGCTGGTGCACTTGTTGGTGGAGCTTTCCTTTCTGGCTTCATTAACGTTGTCTTTGACAGGTTGCTTACAATGGATACGGTCAACCGGGTCTTGGGCAAGAAACTTGGCCCTGACTTGGTTGAGAGACTGAAGATTTCTCTGCATGCTGCTGAAGCTGTGCTTGATGATGCTGAGTACAAGCAACTGGGCAACGAATCTGTGAGGGATTGGCTCAACAGTCTCAGGGATGCTGTTTATGACGCTGATGACTTGCTGGACGCTGTACTCACCAAAGCCGCCACTAAAAAGAAGGTACGTTCTTTCTTGCCTAGTTTCTTCCTCAACCGATATAGGAAGATGGTAGATAAGATGGAACGGGTGGTTACAAGAATAGAATTTCTTGAAAAGCAAAAAGATTTCCTTGGCCTTCAAAAGACTACCAAGGATAATAACTTGTCATCATCATCATCTTCATCATGGAGAGCATCCACATCTCTGGTGGAAGGGAATATATATGGCAGGGAGGGTGATCAACAAGCTTTAATCAGAATAATAAATGACAACAGTGACAGTCAGTTATCTGTGATCCCTATTGTTGGCATGGGTGGGGTTGGTAAAACAACCTTGGCAAAATTGGTGTACAATACCACAGAGGGATTTGATTTGAAAGCATGGGTTTGCATCTCTGAAACATTTGATGTTGTTGAGATTACAAGGAAAACCATTGAGGAAATTACTAAAACTAGTTGTTCCCTTGAGAGTTTAAATTTGCTTCAAAATAAATTGCAGGAAATCTTGTCGGAAAAGAAGTTCTTTATTGTTCTAGACGATGTCTGGAGCGATGATGCTGATAACTGGAAGAAATTTAAAACTCCTTTTCACTGTGGGGCTAAGGGTAGTACGATTCTTTTGACAACTCGCATTCAAGAGGTTACTTCAGTTGTTCAGACATGTGCCTCTTACTTTCTTAATGAGTTGTCAGAAAATTCTTGTTGGTTACTCTTTGCAGAGAATGCATGTTTTCCGGAGTCAAACGGGAACCCAATACTAGAGGATGTCGGTAGAAATATTGTCAGCAAGTGTAAGGGCTTGCCATTAGCTGTAGAAACACTTGGGCGCTTGTTGCGAGGAAAGGATGATGCCAAAGAATGGAATGCTGTTTTAAAGAGTGACATATGGGAATTTTCTATGAAAAATAGTAAAATTATCCCAGCATTGCTAATAAGCTACTTCCAACTCCCTACCTATTTGAAGCGATGTTTCGTTTATTGTTCATTATATCCCAAAGATTATCTTTTTGATAAAGATGAACTAATCTTGCTATGGATGGCTGAAGATCTTCTAAGGCCACCAAGGAGAGGAGAGAGTTTAGAAGATGTTGGTTGCAAATGTTTTGAAGAACTAGCTTCCAGGTTATTTTTTAAACAGCATGTGTTTCATTATAAGATGCATGATCTATTGCATGACCTGGCAATTTTCCTTGCTGGAGACTTCTATTGTTTGTTAGAAGTGCATGGTAAAGCAAAAGGTGCGACTACTTTGACTCGTCATTTGTCTTATGAAAACTTGAATCATGTGCTTTTTGATTCCATCAGTAAAGTAAAATCCTTGAGGACATTCTTCCCAGACAGGACTAGTATCCATTCTCTATTCAATGAAATTGATGGTGATACTATTGGTATCTTAATACCAAAGCTCAAATATTTGAGAGTTTTGTCATTTGCATCGTTTAGAGAACTTGACGTATTGCCTGATTCAATAGATGAATTGATTCATCTACGCTATTTAAATCTCTCTGGGACAGACATCAACACATTGCCAGAGTCGTTGTGCAACTTGCATAATCTGCAGACTTTAATACTATATGTATGTACTAGTCTGACCATGTTGCCTAGTGGCATGCATAATCTAGTGAATTTACGGCACCTTGATCTCAGGGGAACTCTTTTGGAAGAAATGCCTACAGGATTAAGCAAATTGAAACAGTTGCGTATTTTAGATTATTTTGTGGTGGGCAAGTATGAAGATAATGGAATCCAAGAATTAGGAGGGCTCTCAAACCTTCATGGATCATTTGAGATTAAGAAATTAGAGAATGTTGTTGATGCCAGACAAGCAATGAGTGCAAGGATGTTGGAGAAGAACCACATTGACAAGTTATTGTTGGAATGGTCTTCAGGTGAAGAGATAGTTTCGAACAAGGAGACCGAGAGAGATATACTCGATGGCTTGCAACCGCACAATGGCTTGAAAGTGTTGAGAATCAAGGGATTCAAGGGTGAAAGATTTCCAGATTGGGTGGGGCACTGCTCTTACAACGATATGACACGTGTATCTCTAGAGTATTGCAAGAATTGCTGCATGCTGCCTTCACTTGGACAACTGCCATCTCTAAAGTCCCTCCACATTGAAGGTTTTCGTCAGATCAAGCGCATTGGTGATGAGTTTTACAAGAATGACAGCGGTCATCATTCTTCACCTACTGCACCATTCCCTTCATTGGAGACATTGGAATTTCATAATATTCCATGCTGGCAGGAGTGGCACGTAGACCTAGAAGCTTTTCCTCAGCTTAAGACACTTCGAATAGAAGATTGTCCAATGTTAAAGGGAGATATGCTTAATGGCATATTCTTGAGAATGGTTTCTTCTTTGTCGGATGCTTCCAAAGTTTGCAAACTGAAAATAAGGGAAGATCATCAAGGAACGTCTCATGAGATGTTACGTTATGAGGATTCTTTATCAATTAGTGGATGTGAATCCGTGGTGAAGTCTGCATTTAATGTAACGAGCATCAACCATCTATGTTGTCTCCAAGAAGTACATATTTCAGACTGTTCGTCTGCTGTATCCTTTCCGGGCAATTGTTTACCCAAATCTCTGCAAAAGCTCACAATCTTGACTTGCCCAAAATTCGTATTCCCAGAGCAACAGCAGCACAAGTATGATTTGGTAGAGCTTCAAATAGAAGGAAGCTGCGATTCTCTGACCTCGTTCTTGCTGGATGCCTTTCCAAATATCAAGACTCTCAAGATATCAAGGTGTTCAAATCTGGAATCAGTTTCAATGTCAGAGCCACCACACGCTGCTCTTCAACGTCTCACCATCAGTGGTTGCCACAAATTTGTGTTGTTTCCAGAAGAAAGACTGGATGCACCCAACTTGACTCATCTCAATGTCAGTTGGTGCTCAAAGTTGGAGGCATTGCCACGTGACATGAATGCTCTTCTCCCCAGTTTACACTCTCTCAACATACATGGCTGCCGGAAAATTTGTAGGCTGCCAGAGGGCGGTTTGCCTCCTAACTTGAAACAGCTTACCGTTGGGAGTCAATGGAAGGATCTATTATGGATGGGCAACTTGGACGCCCTCACTCGTCTTTCCATTCATGGAAGGAAGTGTGAGAGCATAATAAAGTCATTCCCAGAGGTGGGTTCGCTGCCTCACCTTCCCTCCCTTACCACTCTGCACCTCTTTGCCTTTGAGAATCTGGAGACGTTGGAGTGCAACGAGCTTCTCCACCTCACCTCCCTCCAACATTTACACATTGAAGACTGTTGGAAGTTAGAGAACATGGCTGGAGAAAAGCTGCCTTCCTCTCTGTTACTTCTTCAAATTAAAAAGTGCCCTTTGCTGGGAGAACAGTGCAAGAAGAAGCATCAACAAATTTGGCCCAAAATTTCCCACATCCCCACCATTCATGTTCTGGTAATTTTCCTGTGTGTGAGGCCAAGCCAAAACTTTCTGGAGTGCCTCTACATTCCCATTAGTAGGACACAACCAATTGAGCAAAGAGGAAAAAAGTTGAGAGGAGATGCTAATTTTGCAGGGGTGATCATGACCAACAACAAATTGGGAAATACTTTTGAAAATCTTGATTCCATTAGTAAAGTTGAATCTTTGAGAACATTCTTGCCAACCAGTTACTTTTCTCATTCTGATAACATTGATGGCGTAACAAGTTTCCTAATATTGAAGTTCAAACGTTTGAGAGTTTTGTCATTTTTTTATTCCAAAGGACTTACAATATTGCCTGATTCAATAAGTGATTTGACCTACTTGCGTTACTTGAACCTATCTGGTCTAAGTATTAAGACATTACCAGAATCATTGTGTGACTTGTACAATCTGCAAACGTTAAAGTTGAATGAGTGTTCTAGTTTGATTATGTTACCCAATGGCATGCATAAACTTGTGAATTTGCAACATCTTTATATTGGAGGAACTTGTTTGAAAGAAATGCCAAGAATAATGAGAGAATTGAAACAGTTGCATGCTTTATGCTACTTTATCGTGGGAAAGCAAGAAGACAATGGAATCCAAGAGTTAGGAGGGCTTTTACATCTTCGCGGATCATTTGAGATTAAGAAATTGGAGAATGTTGTTGATGCAAAACAAGCAAGGAGTGTAAGGATTATAGATAAAGAGTGCATCTACTACTTATTGTTGAAATGGTCTTTGGGGGATGACTTAGTTTCAAGCACAGAAAGAGAAAGAGATATACTGGACAGCTTACAGCCACACAATAGCTTGAAATACTTGAGAATCAAGGGATACAAGGGTACAATATTTCCAGATTGGTTGGGGCACTGTTCCTACAACAATATGACAAGTGTATCTCTAGAGTCTTGCAATAATTGCTGCATGCTGCCTTCACTTGGACAGCTGCCATCTCTTAAGGCCCTGAGCATTCGAGGTTTTGGTCAGCTCAAAAGTGTTGGTATTGAGTTTTACAAGAATGAAGATGATCATGATTCTTCACCTGGTGCACCGTTTCCCTCACTCAAGACATTGGAATTTCAGGATATGCCATGTTGA 4800 0.406 MAGALVGGAFLSGFINVVFDRLLTMDTVNRVLGKKLGPDLVERLKISLHAAEAVLDDAEYKQLGNESVRDWLNSLRDAVYDADDLLDAVLTKAATKKKVRSFLPSFFLNRYRKMVDKMERVVTRIEFLEKQKDFLGLQKTTKDNNLSSSSSSSWRASTSLVEGNIYGREGDQQALIRIINDNSDSQLSVIPIVGMGGVGKTTLAKLVYNTTEGFDLKAWVCISETFDVVEITRKTIEEITKTSCSLESLNLLQNKLQEILSEKKFFIVLDDVWSDDADNWKKFKTPFHCGAKGSTILLTTRIQEVTSVVQTCASYFLNELSENSCWLLFAENACFPESNGNPILEDVGRNIVSKCKGLPLAVETLGRLLRGKDDAKEWNAVLKSDIWEFSMKNSKIIPALLISYFQLPTYLKRCFVYCSLYPKDYLFDKDELILLWMAEDLLRPPRRGESLEDVGCKCFEELASRLFFKQHVFHYKMHDLLHDLAIFLAGDFYCLLEVHGKAKGATTLTRHLSYENLNHVLFDSISKVKSLRTFFPDRTSIHSLFNEIDGDTIGILIPKLKYLRVLSFASFRELDVLPDSIDELIHLRYLNLSGTDINTLPESLCNLHNLQTLILYVCTSLTMLPSGMHNLVNLRHLDLRGTLLEEMPTGLSKLKQLRILDYFVVGKYEDNGIQELGGLSNLHGSFEIKKLENVVDARQAMSARMLEKNHIDKLLLEWSSGEEIVSNKETERDILDGLQPHNGLKVLRIKGFKGERFPDWVGHCSYNDMTRVSLEYCKNCCMLPSLGQLPSLKSLHIEGFRQIKRIGDEFYKNDSGHHSSPTAPFPSLETLEFHNIPCWQEWHVDLEAFPQLKTLRIEDCPMLKGDMLNGIFLRMVSSLSDASKVCKLKIREDHQGTSHEMLRYEDSLSISGCESVVKSAFNVTSINHLCCLQEVHISDCSSAVSFPGNCLPKSLQKLTILTCPKFVFPEQQQHKYDLVELQIEGSCDSLTSFLLDAFPNIKTLKISRCSNLESVSMSEPPHAALQRLTISGCHKFVLFPEERLDAPNLTHLNVSWCSKLEALPRDMNALLPSLHSLNIHGCRKICRLPEGGLPPNLKQLTVGSQWKDLLWMGNLDALTRLSIHGRKCESIIKSFPEVGSLPHLPSLTTLHLFAFENLETLECNELLHLTSLQHLHIEDCWKLENMAGEKLPSSLLLLQIKKCPLLGEQCKKKHQQIWPKISHIPTIHVLVIFLCVRPSQNFLECLYIPISRTQPIEQRGKKLRGDANFAGVIMTNNKLGNTFENLDSISKVESLRTFLPTSYFSHSDNIDGVTSFLILKFKRLRVLSFFYSKGLTILPDSISDLTYLRYLNLSGLSIKTLPESLCDLYNLQTLKLNECSSLIMLPNGMHKLVNLQHLYIGGTCLKEMPRIMRELKQLHALCYFIVGKQEDNGIQELGGLLHLRGSFEIKKLENVVDAKQARSVRIIDKECIYYLLLKWSLGDDLVSSTERERDILDSLQPHNSLKYLRIKGYKGTIFPDWLGHCSYNNMTSVSLESCNNCCMLPSLGQLPSLKALSIRGFGQLKSVGIEFYKNEDDHDSSPGAPFPSLKTLEFQDMPC* 1600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0402 1599 Coils Coil 41 61 - -
Amo02g0402 1599 Pfam Rx N-terminal domain 39 98 IPR041118 -
Amo02g0402 1599 SUPERFAMILY L domain-like 1303 1595 - -
Amo02g0402 1599 PRINTS Disease resistance protein signature 355 369 - -
Amo02g0402 1599 PRINTS Disease resistance protein signature 996 1012 - -
Amo02g0402 1599 PRINTS Disease resistance protein signature 259 273 - -
Amo02g0402 1599 PRINTS Disease resistance protein signature 189 204 - -
Amo02g0402 1599 PANTHER OS05G0414200 PROTEIN 39 915 - -
Amo02g0402 1599 PANTHER OS05G0414200 PROTEIN 1283 1596 - -
Amo02g0402 1599 SMART LRR_typ_2 631 654 IPR003591 -
Amo02g0402 1599 SMART LRR_typ_2 1345 1368 IPR003591 -
Amo02g0402 1599 SMART LRR_typ_2 584 607 IPR003591 -
Amo02g0402 1599 SMART LRR_typ_2 1392 1415 IPR003591 -
Amo02g0402 1599 SUPERFAMILY L domain-like 925 1224 - -
Amo02g0402 1599 Gene3D Ribonuclease Inhibitor 710 869 IPR032675 -
Amo02g0402 1599 Gene3D - 319 402 IPR042197 -
Amo02g0402 1599 Gene3D - 155 315 IPR027417 -
Amo02g0402 1599 Pfam NB-ARC domain 173 383 IPR002182 GO:0043531
Amo02g0402 1599 SUPERFAMILY L domain-like 476 872 - -
Amo02g0402 1599 Coils Coil 111 131 - -
Amo02g0402 1599 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 418 IPR027417 -
Amo02g0402 1599 Gene3D - 15 127 - -
Amo02g0402 1599 Gene3D Ribonuclease Inhibitor 1276 1598 IPR032675 -
Amo02g0402 1599 Gene3D - 403 486 IPR036388 -
Amo02g0402 1599 Gene3D Ribonuclease Inhibitor 1084 1226 IPR032675 -
Amo02g0402 1599 CDD RX-CC_like 39 131 IPR038005 -
Amo02g0402 1599 Gene3D Ribonuclease Inhibitor 505 709 IPR032675 -
Amo02g0402 1599 Gene3D Ribonuclease Inhibitor 894 1083 IPR032675 -
Amo02g0402 1599 PANTHER DISEASE RESISTANCE PROTEIN RP 39 915 IPR044974 GO:0006952
Amo02g0402 1599 PANTHER DISEASE RESISTANCE PROTEIN RP 1283 1596 IPR044974 GO:0006952
Amo02g0402 1599 SMART LRR_CC_2 607 634 IPR006553 -
Amo02g0402 1599 SMART LRR_CC_2 1046 1073 IPR006553 -
Amo02g0402 1599 SMART LRR_CC_2 998 1031 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0402 Amo-Chr2 4942427 4949232 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0402 190 661 WRKY Transcription Factor Family AT5G45050 23.092 3.14e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0402 - - ahf:112726290 1839.31