Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0389 ATGCGATCCGCCACCACCACCGCAGCTCTCCTCCCCTCGCGATTCGCAATTAACTGCCGCAGCCCCTCCTCCCCCATCACCACCTCCAGATTTAAAGGAAGATTAGAGTTGCTTAAACAATCATTATCTGAAACACTAACACAATTCTACCCTCTTGCTGGAAGGATCAAAGATGATTTGTCCATTGATTGCAATGATGAAGGTGCTAACTTTGTAGTAGCCAAAGTGAATTGTCCTATTTCAAAGTTTCTAGAGAAGCCTGATTTGAAATCATTGAATGAGCTTCTTGCAACCACTCCATACTCTGGAGAAACAATGATAGGAGCTCATGTGACTAACATTCAAGTCAATGCCTTTGATTGTGGTGGAATTTCAATTGGATTTTGCGTTTCTCATAGGATCTTTGATGCTAATTCAATGAACACCTTCACGAAGGTGTGGACAGAAAGAGCCAGCAGCTGCAACCGCAATTCAAAACCTTTGACAGAACCCAACTTTGCTATAAGTTCTCTGTTCCCAACAAGTACTTTACATTTCAGAGACTTCTCAAAGAAAATCTGGGGTTCCTTTTTGAAGGAAGAAAAATGGGCCACAAGGAGGATTGTGTTCAAAAATTCAACTATTGCCACCCTCAAGGCTCAAATAGTGGCAAAATCTTTATCCAATCCATTGAAGAATCATCTTAATACTCCTACACGTGTTCAGATAGTTTATGCATTGTTGTGGAAGTGTTTCATGGCTGCATCAAAGGCTCAATTTGGAACTCAAAGGCCTTCTATGGTGATTAACACGGTGAATCTTCGTCGAAGAATGGAAGAGTCTCTACGTCCTGAGAATGCTATAGGAAATTTTTTGTGGTTAACAACTTTAGAACACATGAGTAGTGAGCATGAGTTGAGTTTGGATGAGTTGGTGAGTAAATTAAAGAAGTCAAATGAAGAAATTGATAAGGATTTTGTTGCAAGATTGCAAAGTGAAGAAGAAGGGAGTTCAATCATGGAAAATGCTCTTAGGAGAATTAGTGGTGAAACATGGTTTAATAATAATAAGGGTGATGATGAGGCATTAGAAACCTTATGGTTTAATAGTTGGTGTAACTTTGAAGGTTATGATGCTGATTTTGGATGGGGAAAACCTATGTGGCTGAGTAGTGTTGGTGTAAAAGATAATTCAGTGTTAGCCAATAAGATAATTTTGGTTGATACTAAGTTCAAAGATGGTATAGAAGCTTGGACTACCTTGGATGAGGAGAAAATGAAGCATTTGGTGTCAAGCACTGAATTACTCACTTATGCAACTGTTGATCCAAGTCCTTTAGCAGTGTCTAGCTCAAAATTATAG 1341 0.3922 MRSATTTAALLPSRFAINCRSPSSPITTSRFKGRLELLKQSLSETLTQFYPLAGRIKDDLSIDCNDEGANFVVAKVNCPISKFLEKPDLKSLNELLATTPYSGETMIGAHVTNIQVNAFDCGGISIGFCVSHRIFDANSMNTFTKVWTERASSCNRNSKPLTEPNFAISSLFPTSTLHFRDFSKKIWGSFLKEEKWATRRIVFKNSTIATLKAQIVAKSLSNPLKNHLNTPTRVQIVYALLWKCFMAASKAQFGTQRPSMVINTVNLRRRMEESLRPENAIGNFLWLTTLEHMSSEHELSLDELVSKLKKSNEEIDKDFVARLQSEEEGSSIMENALRRISGETWFNNNKGDDEALETLWFNSWCNFEGYDADFGWGKPMWLSSVGVKDNSVLANKIILVDTKFKDGIEAWTTLDEEKMKHLVSSTELLTYATVDPSPLAVSSSKL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0389 446 PANTHER VINORINE SYNTHASE-LIKE 30 439 - -
Amo02g0389 446 Gene3D - 193 431 IPR023213 -
Amo02g0389 446 Gene3D - 7 179 IPR023213 -
Amo02g0389 446 PANTHER F21J9.9 30 439 - -
Amo02g0389 446 Pfam Transferase family 35 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0389 Amo-Chr2 4814178 4817031 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0389 36 387 Monolignol Biosynthesis Gene Families AT5G48930 24.390 4.31e-20 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0389 - - adu:107472827 821.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0015 12 324966 344001 Amo02g0389 02 4814178 4817031 hybridization