Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0387 ATGGAAAAAATTAAAGTTGAAATTATTTCTAGAGAAAATATTCGACCTTCTTCCCCCACACTCTCTCCCTTAAGAACCTTCAAATACTCCATTTTAGATCAACTTGTTCCCTTTCCTCATGCAGTAGCCATCTTATTCTACCCCTCACAAAATCTGTCTGAATTCCCAAAGAGATTAGAGTTGCTTAAACAATCATTATCTGAAACACTAACACTATTTTACCCTCTTGCTGGAAAGACCAAAGATGATTTGTCCATTGATTGCAATGATGAAGGTGCTAACTTTGTAGTAGCAAAAGTGAATTGTCCTATTTCAAAGTTTCTAAGGAAGCCTGATTTGAATTCGCTGAACATGTTTTTTCCAATTACTCCATACTTGGAGGAAACAACCACAGGAGCTCATGTGACTAACATTCAAGTTAATGTCTTTGATTGTGGTGGAATTGCAATTGGATTTTGCATTTCTCATAAGATCATTGATGGTGAATCAGTTAACACCTTCCTGAAGGTGTGGACAGAAAGAGCCGACAGCAAACGCAATTCAAAACCTTTGACAGAACCAAACTTTGCTACAAGTTCGTTGTTCCCTGCAGGTACTTTTTATTTCAGAGACTTGTCAAAGAAAACCTGGGGTTCCCTTCTTAAGGAAGAAAAATGGGTCACAAGGAGGATTTTGTTCAAAAATTCAACTATTGCCACCCTCAAGGCTCAAATAGTGGCAAAATCTTCATCTGATCCATTGAAGAAACATCTTAATACCCCTACACGTGTTCAGATACTTTCTGCATTGTTGTGGAAGTGTTTCATGGCCGCTTCAAAGGCTCAATTTGGAATTCAAAGGCCTTCTATGGTGATTAACACAGTGAACCTTCGCCGAAAAATGGAAGAGTCTCTACATCCTGAGAATTCTATAGGAAATTTTTTGTGGTTTACAACTTCAGAACACATGAGTGAGCATGAGGTGAGTTTGGATGAGTTGGTGAGCAAACTGAAGAAGTCAGTTGAAGAAGTTGATAAGGATTTTGTTGCAAGATTGCAAAGTGAAGAGGAGGGGAGTTCAATCATGGAAAATGCTCTAAGAAAAATTAGTGGTGAAACATGGTCTATTAATAAGGGTGAGGAGGCATTGGAAAGTTTAGCTTTTAATAGTTGGATTAACTTTGCAGGCTATGATGCTGATTTTGGATGGGGAAAACCTATATGGGGGAGTAGTGTTGGTAAAGAGGGTAATTTAGTGTTAGCGAATAAGATAATTTTAATTGATACTAACTCCAAAGATGGTATAGAAGCTTGGGTTACCTTGGATGAGGAGAAAATGAAGCATTTGGCTCAAATACTAGTGAAATCTTCATTAGATCCATTGAAGAATCATCCTACAGGTGTCCAGATAGTTTCTGCATTTTTGTGGAAGAGTTTCATAGCCGCATCAAAGACACAATTTGAAACTCAAAGGTCTTCTGTGGTGACTCATTCGGTGAATCTTTGCCGAACAATCAACGAATCTCTATGTCCTGGTTCACACCAGCAGAACACACGAAACTCAATCCAAGAAGTTGATAAAGATTTTGTTGCAAGATTGCTAAGTGATGAGGAGGAAAGTTCAATTATAGGAGATGTTCTTAGGAATTTTGGCAGTAAAACAAGAGATAAGGCATTGGAAAGATTAGGTTTTACTAGTTGGTGTAACTTTGGATTCTATGATGCAGATTTTGGGTGGGAAAAACCTATGTGGGTGAGTCCTATTGGTTTAACAAGTACTTATGTGGTTACGAATATGATAATCTTGGTTGATACTAGGTTCAATTCAAAGATGGATGAGAAGAAAATGAGGCATTTGGAGTTATTCACTGAATTGCTCACTTATGCAACTCTTGATCCAAGTCCTTTGGTAATGGGATTTAAAAGGTCTAACTCAAAGTTATAG 1923 0.377 MEKIKVEIISRENIRPSSPTLSPLRTFKYSILDQLVPFPHAVAILFYPSQNLSEFPKRLELLKQSLSETLTLFYPLAGKTKDDLSIDCNDEGANFVVAKVNCPISKFLRKPDLNSLNMFFPITPYLEETTTGAHVTNIQVNVFDCGGIAIGFCISHKIIDGESVNTFLKVWTERADSKRNSKPLTEPNFATSSLFPAGTFYFRDLSKKTWGSLLKEEKWVTRRILFKNSTIATLKAQIVAKSSSDPLKKHLNTPTRVQILSALLWKCFMAASKAQFGIQRPSMVINTVNLRRKMEESLHPENSIGNFLWFTTSEHMSEHEVSLDELVSKLKKSVEEVDKDFVARLQSEEEGSSIMENALRKISGETWSINKGEEALESLAFNSWINFAGYDADFGWGKPIWGSSVGKEGNLVLANKIILIDTNSKDGIEAWVTLDEEKMKHLAQILVKSSLDPLKNHPTGVQIVSAFLWKSFIAASKTQFETQRSSVVTHSVNLCRTINESLCPGSHQQNTRNSIQEVDKDFVARLLSDEEESSIIGDVLRNFGSKTRDKALERLGFTSWCNFGFYDADFGWEKPMWVSPIGLTSTYVVTNMIILVDTRFNSKMDEKKMRHLELFTELLTYATLDPSPLVMGFKRSNSKL* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0387 640 Pfam Transferase family 514 599 - -
Amo02g0387 640 Pfam Transferase family 5 442 - -
Amo02g0387 640 Gene3D - 216 448 IPR023213 -
Amo02g0387 640 Gene3D - 449 507 IPR023213 -
Amo02g0387 640 PANTHER VINORINE SYNTHASE-LIKE 6 443 - -
Amo02g0387 640 Gene3D - 3 201 IPR023213 -
Amo02g0387 640 PANTHER F21J9.9 6 443 - -
Amo02g0387 640 PANTHER F21J9.9 455 631 - -
Amo02g0387 640 Gene3D - 508 617 IPR023213 -
Amo02g0387 640 PANTHER VINORINE SYNTHASE-LIKE 455 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0387 Amo-Chr2 4779113 4781602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0387 4 446 Monolignol Biosynthesis Gene Families AT5G48930 24.242 1.94e-23 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0387 - - aip:107628104 681.019