Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0377 ATGTTTCTTACATCTATTCAAGATACTATATATCGTGCTCCAAAACTTATCTTTGGTGCCACTGAATATACAACCGTGATAGATATATGGTCAACTGGTTGTGTAATAGCTGAATTACTTCTTGGACAGCCTTTGTTTCCTGGAGAGAGTGGAGTTGATCAATTAGTTAAAATTATTAAGGTGAGGATTGCCCATGCATTTTATAAGGATAATTTGGATTTGTCTGTCATAGAATTTTGTAATCCTTGA 249 0.3414 MFLTSIQDTIYRAPKLIFGATEYTTVIDIWSTGCVIAELLLGQPLFPGESGVDQLVKIIKVRIAHAFYKDNLDLSVIEFCNP* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0377 82 Pfam Protein kinase domain 8 61 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0377 82 Gene3D Transferase(Phosphotransferase) domain 1 5 61 - -
Amo02g0377 82 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 61 - -
Amo02g0377 82 SUPERFAMILY Protein kinase-like (PK-like) 6 61 IPR011009 -
Amo02g0377 82 ProSiteProfiles Protein kinase domain profile. 1 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0377 Amo-Chr2 4623266 4623596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0377 11 61 Core Cell Cycle Gene Families AT3G48750 50.980 1.56e-16 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Amo02g0377 Pkinase 1.2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0377 K03083 - thj:104816818 99.7525