Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0376 ATGGACCAGCTTCCCCAACCCGAGCGCCACCGCAGCGACAAATACACTTCCACTGCTCTTGCCGTCACCCCCACCAGACTCAGCACCAAGCGGATCCTTCAAAAGGACGGCCCAACCCCCGCCAGAACCATGAGGTACCGGGGTGTGAGGCGGAGGCCATGGGGACGATATGCCGCTGAGATAAGGGACCCTCAATCTAAGGAGCGGCGTTGGCTGGGGACATATGACACGGCGGAGGAAGCCGCCCGCGCCTACGACACCGCCGCCAGAGTCTTGCGTGGCCCCCATGCGAGAACCAACTTTGTGTACTATACTTTCCCTCCTCAACCTTTTTCCATCTCCGTCACCAACAAAAATAACCATAAAGACATCCTTAACCGCAGTAGCCACCTCTTGGGAAGCCAGTTCAGCTTCTCCATCCATCCTAACCAACTCTTCAACTGCCGTAACCGCCACTTGGGTGGATTTTGGCCTGACCCCTTCTCCTCCTACTCCGCCCCTTCTTCATTTTCTACCTTCCAGCAACAGCGAAACCAGCAGCTTAACTCCACAAACATGCTCCTCCCCGGTGACTTCATAGCCCCTTCTGTTTCACCTTCCTTTAGCCAGCATTTATCCAACCCCAAGGGCAGTTTGGTCAACTCATCACATGGTGGCCATGTTAACCCTTCTCCTTCATCTTCATTTAGTCACCATTCATCCTACCCCAGAGGCAGTATCAACTCATCACATGGTGGCAATGCTAATCCTTCTCTTTCATCTTCCCTTAGACAGCCTTTATCATACCCCAAGGGCAATTTAGTCAACTCATCACATGGTGGCAGTGCTAACCCTTCTGTTTCATCTTCTTCCTTTAGCCACCACTTATCATACCCCAAGGGCAGTTTAGTCAACTCATCACATGGTGTCAATGCTAATAACCTTTCTCTTTCATCTTCGTTATCCTACCCCAAGGGCAATTTAGTCAACTCATCACATGGTAGCAATGCTCCTAACTACACCGCACGCTTTTCTTCCTCTTGCCTGACAAACACAAACAGTCTCGGTTGTGGCAGTGAATACTCGCAAGAGTTCTTTCATCACTCAGACTCATCATCGGAGTTGTTGGAAGACATAGTTAGCGGTTTCTTGAAAAGTCCAAAGCCCACTAAAAGTGAGTGTCTGTTGTTAGGTGCTCCTACTTCTCCATCACAAGATTCTTCCCACCTTAAGGCTGAGTCATTTCCTCCTCTTTCCGCTGTTTCCACAGGCCAGATGATGAAGAAAGACGAGGATTTTAATGTTCCTTTGTATCAAGATGGTTTCCACATGCAGCAACTTGGTGTTTTTAATTTCAATGGCTCTAGCAATGCGGCAGTTCCCTCTGGCATGCCTCTTACTCAGGAGAAGAAGATAGACAACAACAACCACAACAGCATCAACAACAACAACAACAGCAGCAGTAATCATCTTGAAGAGTGGCCTATCATGGAAGACATTTTTAATCAGTACCCGGACTTTCTTAATGATTTTCTTAATTAG 1521 0.4852 MDQLPQPERHRSDKYTSTALAVTPTRLSTKRILQKDGPTPARTMRYRGVRRRPWGRYAAEIRDPQSKERRWLGTYDTAEEAARAYDTAARVLRGPHARTNFVYYTFPPQPFSISVTNKNNHKDILNRSSHLLGSQFSFSIHPNQLFNCRNRHLGGFWPDPFSSYSAPSSFSTFQQQRNQQLNSTNMLLPGDFIAPSVSPSFSQHLSNPKGSLVNSSHGGHVNPSPSSSFSHHSSYPRGSINSSHGGNANPSLSSSLRQPLSYPKGNLVNSSHGGSANPSVSSSSFSHHLSYPKGSLVNSSHGVNANNLSLSSSLSYPKGNLVNSSHGSNAPNYTARFSSSCLTNTNSLGCGSEYSQEFFHHSDSSSELLEDIVSGFLKSPKPTKSECLLLGAPTSPSQDSSHLKAESFPPLSAVSTGQMMKKDEDFNVPLYQDGFHMQQLGVFNFNGSSNAAVPSGMPLTQEKKIDNNNHNSINNNNNSSSNHLEEWPIMEDIFNQYPDFLNDFLN* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0376 506 ProSiteProfiles AP2/ERF domain profile. 45 102 IPR001471 GO:0003700|GO:0006355
Amo02g0376 506 Gene3D AP2/ERF domain 44 103 IPR036955 GO:0003700|GO:0006355
Amo02g0376 506 MobiDBLite consensus disorder prediction 199 284 - -
Amo02g0376 506 SUPERFAMILY DNA-binding domain 45 102 IPR016177 GO:0003677
Amo02g0376 506 PRINTS Ethylene responsive element binding protein signature 46 57 IPR001471 GO:0003700|GO:0006355
Amo02g0376 506 PRINTS Ethylene responsive element binding protein signature 68 84 IPR001471 GO:0003700|GO:0006355
Amo02g0376 506 CDD AP2 45 101 IPR001471 GO:0003700|GO:0006355
Amo02g0376 506 Pfam AP2 domain 45 94 IPR001471 GO:0003700|GO:0006355
Amo02g0376 506 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 281 504 - -
Amo02g0376 506 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 16 275 - -
Amo02g0376 506 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 281 504 - -
Amo02g0376 506 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ESR2-LIKE 16 275 - -
Amo02g0376 506 SMART rav1_2 45 108 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0376 Amo-Chr2 4611798 4613318 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0376 43 103 AP2-EREBP Transcription Factor Family AT1G24590 85.246 3.51e-30 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Amo02g0376 AP2 1.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0376 - - adu:107472834 907.131