Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0372 ATGGCTGGTGCACTTGTTGGTGGAGCTTTCCTTTCTGGCTTCATTAACGTTGTCTTTGACAGGCTCCTTACAAAAGATGCGGTCAACTTGGTGTTGGGCAAGAAGCTTGACCCTGACTTGGTTAAGAGGCTGAAGATTTCTCTGCATGCTGCTGAAGCTGTGCTTGATGATGCTGAGTACAAGCAACTGGGCAACGAATCTGTGAGGCAGTGGCTCAACGATCTTAGAGATGCTGTTTATGAGGCTGATGACTTGCTGGACGCTGTCCTCACCAAAGAGGCGATTCAAAAGGAGGGAAGTTCTTACTGGCCTGATTACTTCCTCAACCGGGAAAGGGAAATGGTAGATGAGATGGAAAGGGTGGTTACAAAGATAGAATTTCTTGAACAACAAAAATATTTCCTTGGTCTTCAAAAGACTACCAATATCTTGTCATCATCATGGAGAGAATCCACATCTCTGGTGGAAGGGAATATATATGGCAGGGAGGATGATCAACAAGCCTTACTCAAAGTAATAAATGGCAGCAGTGAAAGTGAGTTATCTAACTTATCTGTGATCCCTATTGTTGGCATGGGTGGGGTTGGTAAAACAACTTTAGCAAAATGGGTGTACAATACCACGGAGGGATTTGATTTGAAAGCATGGGTTTGCATCTCTGAAACATTTGATGTTGTTGAGATTACAAGGAAAACCATTGAGGAAATTACTAAAACTACTTGTACCCTTGGGAGTTTGAATTTGCTTCAGAATAAATTGCAGGAGATCTTGTCGGGGAAGAAGTTCTTTGTTGTTCTAGACGATGTCTGGAGCGATGATGCTGATAACTGGAAGAAGTTTAAAACTCCTTTTCACTGTGGGGGTAAGGGTAGTATGATTCTTCTAACAACTCGCATTAAAGAGGTTGCTTCAGTTGTTCAGACATGTTCCTCTTACTTTCTTAATGAGCTGTCCGAAGATTCTTGTTGGTTACTCTTTGCAGAGAATGCATGTTTTCCGAAGTCAAATGGGAACCGAACACTCGAAGATATCGGTAGACAGATTGTCAACAAGTGTAAGGGCTTGCCATTGGCTGTAGAAACACTTGGGCGCTTGTTGCGAGGAAAGGATGATGCTAAAGAATGGAATGCTGTTTTAAGCAGTGACATCTGGGAATTTTCTACGAAAAATAGTAAAATTATTCCAGCATTGTTAATAAGCTACTTCCAGCTACCTCCTTACTTGAAGCGTTGTTTCGTTTATTGTTCCTTGTTTCCCAAAGATCATGCTTTTGGGAAAAATAAACTAGTTTTGCTGTGGATGGCTGAAGATCTTTTAAGGCTACCAAAGAGAGGAGAGAGTTTAGAAGAGGTTGGTTCTCAGTGTTTTGAAGAATTAGCTTCAAGGTTATTTTTTAAACCACATTATGACACATACGTGATGCATGATCTCATGCATGACTTGGCAGTATTCCTTGCTGGAGATTTCTATTGTAGAATAGAAGAACTTGGTGAACAAGAAGAAAAGAAGGTTCTCACTCGCCATTTCTCATATTTCCCACCACGAAGGTTAGATCATCCAATCTCAAAAGTCTTTAACTCCAATGCGAAGTTGGAATCTTTGAGGACATCGCTGTATATTGATGATTTGTTCAGCATGGAAAGTGTAGCATCTAAGTTTAAATACTTGAGAGTTTTATCCTTTCATAAACTTGATGTATTACCTGATTCAATAGGTGAATCGATTCATCTACGGTATTTGAATCTCTCTTCTACTGACATCAACAGGTTGCCAGAATCATTGTGCAACTTGTATAATCTACAAACATTAATATTGTACAGATGTACTAAGTTGACTATGTTGCCCATTAACATGCACAATCTTGTGAATTTACGGCATCTGGATCTTAGGAAAACTTGTTTGGAAGAAATGCCTGGAGGAATAAGCAAAATGAAACACTTGCATACCTTAAGTTCCTTTGTGGTGGGGAAGCATGAAGATAATGGAATCAAGGAATTAGGAGGGCTCTCGAATCTTCACAGATCACTTGAGCTTAAGAAGTTGGAGAATATTGTTGATGTGAAAGAAGCAGAGAATGCAAGGATGACAAACAAGAATCTCATGAACGAATTATGCTTGGAGTGGTCTTCAGGTGATGATATGGTTCCGAACACAAAAGCCGAAAGAGATATACTTGACAACTTGCAACCTCACAACAGTTTGGAAAAGTTGACCATCAAGGGATATAAGGGTACAATATTTCCAGATTGGTTGGGGCACTGTTCATACAACAATATGACAAGTGTATCTCTCAAGTCTTGTAACAATTGCTTCATGCTGCCTTCACTTGGACAGTTGCCATCTCTTAAGGCCCTGCGCATTCAAGGTTTTGGTCAGCTGAAGTGTGTTGGCATGGAGTTTTACAAGGATATTGGTGACCCTTCTTTGCATATTGCTCCTCCTTTTCGCTTGTTGGAGAGTCTGAAATTTTATGATATGGCATGTTGGGAGGAATGGCACTTACCTGACTCAAAAGTTTTTCCTCAGCTTAAGCGTCTTCAAATAACAGATTGTCCAATGTTAAAGGGAGATATGCTTCATCAGGTATTCATGAGAATCGTTTCTTCTTCATCGGATGCTTTGAAAGTTCGCAAGTTATTTATAAACAAATATGAAGCAGGATGGATTCCAGGTTTGTCACTTAATGGGGATACATTATCAATTACGGGAAGTGAATCCGTGGTGGAGTCTGCAATTAACGAAATGATGAGCATTAAGCATCTACCCTCCCTCCAAGAAGTAGAAATCATCGGGTGTTCGTTTGCCGTGTCCTGGCCGAACAATTGTTTAGTACCCAAATCTTTGCAAAAGCTCACAATCAGGAAGTGCAGCAAAGTGGAATTCCCGCAGCACAAGTATGATTTGGTAGAGCTACTAATATACAGTTGTGATTCACTGACCTCCTTGTCGTTGGATGTCTTTCCCAATCTCAAGAATCTCGAGATAAGAGGGTGTGAGAATCTGGAATCAGTGTCAATGTCAGAGGCACCACACGCTGCTCTTCAACGTCTGTCCATCAGTGGATGCCACAAATTAGTGTCATTTGCAGGAGAAGGACTGGCTGCACCCAACTTGACTCATCTCAATGTTAGCAGGTGCTCAAAGTTGGAGGCATTACCACGTGACATGAAGAGTCTACTCCCAAGTTTACAGTCTCTCCAGATATATGGCTGCCCAAACATTTGCAGGTTGGCAGAGGGTGGTTTGCCGCCTAACTTGAAAGTACTTGATGTTGCAATTGGCGAGCAACAAATGAGGGGTCTATCATGGATTCCTAACTTACACGCCCTCACTCATCTTACCATTTATGGTTATTACTGCCACAACATAAAGTCATTCCCAGAGGTGAGTTCGCTGCCTCACCTTTCCTCCCTTACCACTCTACATATCCAAGACTTTTATAATCTGGAGACATTGGAGTGCAACGAGCTTCTCCGCCTCACTTCCCTTCAACAATTGCACATTTATGACTGTTCAAAGCTGGAGAATATGGAAGGAGAAAAGCTGCCTCCCTCTCTCTTGCTACTTCAACTTACAGGGTGTGGTTTGCTGGGAGAACACTGCAAGAACAAGCATCAACTAATCTGGCCCAAAATTTCCCACATCCCCACCATTCAAGTCAATGGAGAACAAATTTCCTGA 3681 0.4148 MAGALVGGAFLSGFINVVFDRLLTKDAVNLVLGKKLDPDLVKRLKISLHAAEAVLDDAEYKQLGNESVRQWLNDLRDAVYEADDLLDAVLTKEAIQKEGSSYWPDYFLNREREMVDEMERVVTKIEFLEQQKYFLGLQKTTNILSSSWRESTSLVEGNIYGREDDQQALLKVINGSSESELSNLSVIPIVGMGGVGKTTLAKWVYNTTEGFDLKAWVCISETFDVVEITRKTIEEITKTTCTLGSLNLLQNKLQEILSGKKFFVVLDDVWSDDADNWKKFKTPFHCGGKGSMILLTTRIKEVASVVQTCSSYFLNELSEDSCWLLFAENACFPKSNGNRTLEDIGRQIVNKCKGLPLAVETLGRLLRGKDDAKEWNAVLSSDIWEFSTKNSKIIPALLISYFQLPPYLKRCFVYCSLFPKDHAFGKNKLVLLWMAEDLLRLPKRGESLEEVGSQCFEELASRLFFKPHYDTYVMHDLMHDLAVFLAGDFYCRIEELGEQEEKKVLTRHFSYFPPRRLDHPISKVFNSNAKLESLRTSLYIDDLFSMESVASKFKYLRVLSFHKLDVLPDSIGESIHLRYLNLSSTDINRLPESLCNLYNLQTLILYRCTKLTMLPINMHNLVNLRHLDLRKTCLEEMPGGISKMKHLHTLSSFVVGKHEDNGIKELGGLSNLHRSLELKKLENIVDVKEAENARMTNKNLMNELCLEWSSGDDMVPNTKAERDILDNLQPHNSLEKLTIKGYKGTIFPDWLGHCSYNNMTSVSLKSCNNCFMLPSLGQLPSLKALRIQGFGQLKCVGMEFYKDIGDPSLHIAPPFRLLESLKFYDMACWEEWHLPDSKVFPQLKRLQITDCPMLKGDMLHQVFMRIVSSSSDALKVRKLFINKYEAGWIPGLSLNGDTLSITGSESVVESAINEMMSIKHLPSLQEVEIIGCSFAVSWPNNCLVPKSLQKLTIRKCSKVEFPQHKYDLVELLIYSCDSLTSLSLDVFPNLKNLEIRGCENLESVSMSEAPHAALQRLSISGCHKLVSFAGEGLAAPNLTHLNVSRCSKLEALPRDMKSLLPSLQSLQIYGCPNICRLAEGGLPPNLKVLDVAIGEQQMRGLSWIPNLHALTHLTIYGYYCHNIKSFPEVSSLPHLSSLTTLHIQDFYNLETLECNELLRLTSLQQLHIYDCSKLENMEGEKLPPSLLLLQLTGCGLLGEHCKNKHQLIWPKISHIPTIQVNGEQIS* 1227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0372 1226 Gene3D - 16 130 - -
Amo02g0372 1226 SUPERFAMILY L domain-like 1013 1212 - -
Amo02g0372 1226 Coils Coil 41 61 - -
Amo02g0372 1226 Gene3D - 316 399 IPR042197 -
Amo02g0372 1226 Gene3D Ribonuclease Inhibitor 892 1029 IPR032675 -
Amo02g0372 1226 Gene3D Ribonuclease Inhibitor 1036 1209 IPR032675 -
Amo02g0372 1226 Coils Coil 111 131 - -
Amo02g0372 1226 Gene3D - 145 312 IPR027417 -
Amo02g0372 1226 PRINTS Disease resistance protein signature 352 366 - -
Amo02g0372 1226 PRINTS Disease resistance protein signature 985 1001 - -
Amo02g0372 1226 PRINTS Disease resistance protein signature 186 201 - -
Amo02g0372 1226 PRINTS Disease resistance protein signature 256 270 - -
Amo02g0372 1226 SUPERFAMILY L domain-like 471 1077 - -
Amo02g0372 1226 PANTHER OS05G0414200 PROTEIN 35 1027 - -
Amo02g0372 1226 Pfam Rx N-terminal domain 12 97 IPR041118 -
Amo02g0372 1226 Gene3D Ribonuclease Inhibitor 516 870 IPR032675 -
Amo02g0372 1226 Pfam NB-ARC domain 171 380 IPR002182 GO:0043531
Amo02g0372 1226 Coils Coil 678 698 - -
Amo02g0372 1226 Gene3D - 400 483 IPR036388 -
Amo02g0372 1226 PANTHER DISEASE RESISTANCE PROTEIN RP 35 1027 IPR044974 GO:0006952
Amo02g0372 1226 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 415 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0372 Amo-Chr2 4551684 4556629 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0372 183 374 WRKY Transcription Factor Family AT5G45050 28.283 5.96e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0372 - - ahf:112726290 1739.16