Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0367 ATGGCTAGTGGAGCTTTCCTTAATGGCTTCATTAACGTTGTCTTTGAAAGGTTGCTCACAATGGATACGGTCAACCAGGTCTTGGGCAAGAAGCTTGACCCTGGCTTGGCTGAGAGGCTGAAAATTTCTCTGTATGCTGCTGAAGCTGTGCTTGATGATGCTGAGCACAAGCAACTGGGCGACGATCGTGTGAGGGATTGGCTCAACAGTCTGAGAGATGCTGTTTATGATGCTGATGACTTTCTGGACGCTCTACTCACCAAAGCCGCCACGCAAAAGGAGGTATATTTTTTGTTGCCTAGTTTCTTCCTCAACCGACATAGGAAGATGGTAGATAACATGGAAGGGGTGGTTGCAAGAATAGAATTTCTTGTAAGTCAAAAAGATATCCTTGGTCTTCAAAAGACTACCAAGGATAATAACTTGTCATCATCATCATCATCGTCATCATGGCGAGAAACCACATGTCTGATGGAAGGGAACATATATGGCAGGGAGGATGATCAACAAGCTCTAATCAAAACAATAAATGACAACAGTGAATCTCAGTTATCTGTGATTCCTGTTGTTGGCATGGGTGGGGTTGGTAAAACAACCTTAGCCAAATGGGTGTACAGTGTCGTGGAAGGATTTGATCCGAAAGCATGGGTCTGCATCTCTGAAACATTTGATGTTGCTGATATTACAAAGAAAACCATTGAGGACATTACTAAAAATTCTTTTGCCCTTGGGACTTTAAATTCACTACAAAATAAACTGCAGGAAGTCTTGTCAGCAAAGAAGTTCTTCATTATTCTAGACGATGTATGGAGCGATGATGCCGATAAGTGGAAGCAATTTATAACTCCTTTTCACTGTGGGGCTAAGGGTAGTACAATTCTTATTACTACTGTGGCAGCCAATGCATGTTTTCCGGAGTCAAATGGGAACCCAATACTAGAGGAAATCGGTAGAAAGATTGTCAAGAAGTGTAAAGGGTTGCCATTAGCTGTTGAAACACTTGGGCGCTTGTTGCAAGGAGAGGATGATGCTGAAGAATGGAATGCTGTTTTAAGGAGTGACATCTGGGAATTTCCCATGAAAGATAGTAAAATTATTCCAGCATTGTTAATAAGCTACTTCCAGCTACCTCCTTACTTGAAGCGTTGTTTCGTTTATTGTTCCTTGTTTCCCAAAGATCATGAGTTTGAGAAAAATGAACTAGTTTTGCTGTGGATGGCTGAAGATCTTTTAAGGCTACCAAAGAGAGGAGAGAGTTTAGAAGAGGTTGGTTCTCAGTGTTTTGAAGAATTAGCTTCGAGGTTATTTTTTAAACAAGAATGGTGTTTTCATAAGATGCATGATCTCTTGCATGACTTGGCAATATTCCTTGCTGGAGACTTCTATGGTAGAATAGAAGAGCTTGGTGGCAAGATCAAACATGAACTTTCCATTGATTGCAATGATGAAGGTGCTAATTTTGTAGTATCCAAAGTAAAGTGTCATCTTTCTGTGTTTCTAAGCCACCCCAATTTGACCCTTTTGCACAAGTTCCTTCCTAGTGATGAACTTGTTTCTAAAGAATCAAACTTTGGAACCTATGTCACCAACATCCAAGTGAATGTGTTTCAATGCGGTGGAATTGCCATTGGAACACGCATTTCACATAGGATCATAGATGGTGCTGCATTAGCCACATTCCTAAAGTGTTGGAGTGAAAGAGCTAGAGGCTGCAAACACTTGACACAACCAAAGTTCATAGCATCTTCTGTTTTTCCCACAAATAGTTTATGGCTTAGAGACTTATCAATGGGAATGTGGGGTTCCTTGTTCAGGCAAGGAAAGGGTGTAACAAAGAGGTTCTTGTTCACAAACAAAGCTATATCCACCCTCAAGGTTCAAATATCTGCAAAATATTGCTATGATGTAGCCGAAGATTCGCCTACGCGGTTGGAGACTGTTTCTGCAATCTTGTGGAAGTGTCTCATGGCAGCATCCCAATCGCGATTTGAAGTGCAAAGGTCTTCTTTTGTGACTCATTTGGTGAACTTGCGGCGGAGAATGGATGAAGCTCTATGTCCTGATCACACCATGGGTAACCTAGTTTGGTTAGTTTCTGCTAAGCATTTCGACGAACACGGGACGAGCATGGATGACTTGGCGTGTAAACTAAGGAACACAATATCAAGAATCGATAAGGATTTTGTCAATGAATTGCGAAGCGAAAAAGGGATCTCGATCATGAAAGATTCGCTTAGGAAAATATGTGAGTTAAGATCAAGGAATGAAATGGAACATTTTGGGTTTAGTAGTTGGTGCAATCTTGGATTCTATGAAGCTGATTTTGGGTGGGGAAAACCAACATGGGTGAGTAGTGTTGCATCAAATGGTTCTGTGTTCATGAATCTCATCATTTTGGTTGATACAAAGTTAAAAGATGGCATTGAAGCTTGGGTTACATTGGATGAACATGACATGAATCATTTGATTTCAAACACTGAAATCCTCAATTATGCAACTTTGAATCCAAGTCCTTTAGCCAAAGTTAATAAGTCGTTTCCATGA 2544 0.4076 MASGAFLNGFINVVFERLLTMDTVNQVLGKKLDPGLAERLKISLYAAEAVLDDAEHKQLGDDRVRDWLNSLRDAVYDADDFLDALLTKAATQKEVYFLLPSFFLNRHRKMVDNMEGVVARIEFLVSQKDILGLQKTTKDNNLSSSSSSSSWRETTCLMEGNIYGREDDQQALIKTINDNSESQLSVIPVVGMGGVGKTTLAKWVYSVVEGFDPKAWVCISETFDVADITKKTIEDITKNSFALGTLNSLQNKLQEVLSAKKFFIILDDVWSDDADKWKQFITPFHCGAKGSTILITTVAANACFPESNGNPILEEIGRKIVKKCKGLPLAVETLGRLLQGEDDAEEWNAVLRSDIWEFPMKDSKIIPALLISYFQLPPYLKRCFVYCSLFPKDHEFEKNELVLLWMAEDLLRLPKRGESLEEVGSQCFEELASRLFFKQEWCFHKMHDLLHDLAIFLAGDFYGRIEELGGKIKHELSIDCNDEGANFVVSKVKCHLSVFLSHPNLTLLHKFLPSDELVSKESNFGTYVTNIQVNVFQCGGIAIGTRISHRIIDGAALATFLKCWSERARGCKHLTQPKFIASSVFPTNSLWLRDLSMGMWGSLFRQGKGVTKRFLFTNKAISTLKVQISAKYCYDVAEDSPTRLETVSAILWKCLMAASQSRFEVQRSSFVTHLVNLRRRMDEALCPDHTMGNLVWLVSAKHFDEHGTSMDDLACKLRNTISRIDKDFVNELRSEKGISIMKDSLRKICELRSRNEMEHFGFSSWCNLGFYEADFGWGKPTWVSSVASNGSVFMNLIILVDTKLKDGIEAWVTLDEHDMNHLISNTEILNYATLNPSPLAKVNKSFP* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0367 847 Gene3D - 372 452 IPR036388 -
Amo02g0367 847 PANTHER F21J9.9 468 840 - -
Amo02g0367 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 387 IPR027417 -
Amo02g0367 847 Gene3D - 146 299 IPR027417 -
Amo02g0367 847 PANTHER VINORINE SYNTHASE-LIKE 468 840 - -
Amo02g0367 847 Pfam NB-ARC domain 166 298 IPR002182 GO:0043531
Amo02g0367 847 Pfam NB-ARC domain 304 352 IPR002182 GO:0043531
Amo02g0367 847 Pfam Transferase family 467 827 - -
Amo02g0367 847 Gene3D - 12 127 - -
Amo02g0367 847 Pfam Rx N-terminal domain 36 103 IPR041118 -
Amo02g0367 847 Gene3D - 300 371 IPR042197 -
Amo02g0367 847 Gene3D - 608 831 IPR023213 -
Amo02g0367 847 PRINTS Disease resistance protein signature 256 270 - -
Amo02g0367 847 PRINTS Disease resistance protein signature 186 201 - -
Amo02g0367 847 Gene3D - 453 591 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0367 Amo-Chr2 4509864 4514657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0367 467 807 Monolignol Biosynthesis Gene Families AT5G48930 23.955 2.86e-17 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0367 - - adu:107472739 915.605