Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0323 ATGGTGGACGAAGAAGGTGAATTCGCCGGCACAATTTGCTCCATTTGCTACGAAGATCTCAAACCAGTTTCCGAAGATCTTCAATCTATCTCCGTTTGCGGCCACGTCTTCCACGAGCTTTGCTTGCAGCAATGGTTCGAGTACTGTTCGAAAGCGAAGAAGCACACTTGCCCCGTTTGCAAGCAGAGTTGCAGGGTCGGCGATGCTTGCAGGCTTTACTTCCAATCGGTGGGCGATGTGGTCGAATCTGTTATGCATAGGAAACCATTTGATTCCGAAGAAGATTCCGGAGTTTTGAGAAAGGAAGTGAACAGGTTGGAGGTCAGGCTTTCGGGGCTTAGTTCAGAGTTGGAGAAGAAGGTGAAGGAAATTGAGCAGCTCACGAAGGAGCTTGGTGCTTGCAAGGAGAAAGCAAAGATTGAAATAGCATTAAAAAATGAGGCCTTGAGTCAAAAAGCATCCATGCAAACCGAGCTTCGTATGAAGTCAGAGGAGCTTGAGAAGTCAACTTTTGAGTGCTATTCATTACAAAAAAGAAATATCACTTTGGCTAAGGAAATTGCAGCATTTAAATTAGTCTCTGATATTGACCTTAATGAAGAGGAAGTTTTGAAGTATGCAACTTTGGGTAACGGGTTTAATGATAAAGATACGATAGACACATTGAGCAGATCTATGGTTCGGCGTAACAGGGATTACAAAGATCTAATAGCTAAACGCAATGAATTAGTGGCCAAGTGCAATCATCTAGAAAAGGGTGAGGCTCGGTACATTAAAAAGCTTGAGAAGGCTAAGGAGAAGATTCTTAAATTGAAGGCTAGGGTACAAGAACTAGAGACAGCTGCAGAAGTAAGAGAGAACCATTATCTGAAGTCTTTGAAAGCTTCAAAGATGAATAAGTGTTCAAATAATCTTGAAAACAACCTCAGTTCTAAGAATGATGTACCCACGACCAGCAATACTCCATTAAATGAGCAAACTAAACAAACTTCACCCAAATCTGAAATGGACTTGAGTGTGAGCAACAGTAAATCTCTACAATTTTCAAGGATAGTCAACTGCATTCCTACCGAAAGTAAAGCTGTAAATGTTAGTAATGAAAATAAATCTACCCCTGCTCTTCGAAAAGAGAGGGATTTTATATCTCTTGATGCTGATGCTTCAGAATTTACTGAACCTTTGTCTGGAGGGTCAAGACGTGACTGCAATGATCGATACAGGGATGGTGCTGCTCTTAGCAAGCCTACTGTAGCCAAGTCAGATGCAGCATCCGAAAAGAAGGAAGAAACAGCAGCTCAAGGAACATGTAACTTGGCTGATTCTTCAAGAATTGACATTGATGTTGAAATGACGAAAAATGATGTCATTGATTTGGATGATGATATAACATTACTCGATAAACAAGTTCAACCCAAGGTTAATATTATAAAGGAGTCACCACCAATAATTGCAAATCCAGGGGACATTTGTTTTTCTGGCGGATTGCTTGGTCCTGATGGATCACATAGGTACTTGGGTAAATGGTGCAAGCGTAGAAAAAATGGCGAATCGCAATCGGTAGATGGAGGATTGATAGCTGTTGGGGCTGATGGTAGAGGTGGCAGAATTAAAGTTCTAAGGACCGCAGGCCAAACCTTCATGGATGACAAGGAAAATGACAAGGAATCAAAAAGGTTAAAGGTTGGACCTAAGAGAAGTAGTTTGCGACCCCAGGGATGTCTGCAGATAGATCACTTCTTTGGCAGGGTTAATCACTAA 1758 0.4164 MVDEEGEFAGTICSICYEDLKPVSEDLQSISVCGHVFHELCLQQWFEYCSKAKKHTCPVCKQSCRVGDACRLYFQSVGDVVESVMHRKPFDSEEDSGVLRKEVNRLEVRLSGLSSELEKKVKEIEQLTKELGACKEKAKIEIALKNEALSQKASMQTELRMKSEELEKSTFECYSLQKRNITLAKEIAAFKLVSDIDLNEEEVLKYATLGNGFNDKDTIDTLSRSMVRRNRDYKDLIAKRNELVAKCNHLEKGEARYIKKLEKAKEKILKLKARVQELETAAEVRENHYLKSLKASKMNKCSNNLENNLSSKNDVPTTSNTPLNEQTKQTSPKSEMDLSVSNSKSLQFSRIVNCIPTESKAVNVSNENKSTPALRKERDFISLDADASEFTEPLSGGSRRDCNDRYRDGAALSKPTVAKSDAASEKKEETAAQGTCNLADSSRIDIDVEMTKNDVIDLDDDITLLDKQVQPKVNIIKESPPIIANPGDICFSGGLLGPDGSHRYLGKWCKRRKNGESQSVDGGLIAVGADGRGGRIKVLRTAGQTFMDDKENDKESKRLKVGPKRSSLRPQGCLQIDHFFGRVNH* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0323 585 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 583 - -
Amo02g0323 585 Pfam Ring finger domain 12 61 IPR001841 -
Amo02g0323 585 SUPERFAMILY RING/U-box 10 65 - -
Amo02g0323 585 SMART ring_2 13 60 IPR001841 -
Amo02g0323 585 ProSiteProfiles Zinc finger RING-type profile. 13 61 IPR001841 -
Amo02g0323 585 Coils Coil 103 137 - -
Amo02g0323 585 MobiDBLite consensus disorder prediction 302 340 - -
Amo02g0323 585 CDD RING-H2 13 61 - -
Amo02g0323 585 MobiDBLite consensus disorder prediction 549 568 - -
Amo02g0323 585 Coils Coil 254 281 - -
Amo02g0323 585 MobiDBLite consensus disorder prediction 391 434 - -
Amo02g0323 585 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 64 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0323 492 585 C3H Transcription Factor Family AT4G01270 40.594 1.15e-15 78.2