Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0317 ATGGCTGGTGCAGTTGTTGGTGGAGCTTTCCTCTCTGGCTTCATTAACATTGTCATTAACAAGTGCCTTACAGAGGATGCGGTCAACAAGGTGTTTGGCAAGAAGCTTGGTTCTGACTTGGTTCAAAGGCTGAAGACTGCTCTGTTGGGTGCTGAAGCTCTTGTTGCTGATGCTGAGATGAAGCAGTTTGGTAATCTCAATGTGAGGAAGTGGCTCGATAGTCTCCGGGATGCTGTTTACTGTGCTGAGGACTTGCTCGATGCTGTCCTCCTCAAAGCCACCACTCAAAAGAATGCAAGTTTTTCCTGGTGGTCCCCTAGCTTCTTCATCAACCAAGATAGAGATGACATGGTAGACAAGATTGAAGGGGTGGTTACAAGAATTGAGGATCTTGGAAAACAAAAAGATTTCCTTGGTCTTGAAAAGATTCTCACTGGTAGCTCATCATGGAGGACTCCATCCAGTTCTCTTGTAAAAGGGAGTGTGTATGGCAGGGAGGATGACAAGAAGGCCTTAATCAAGATGCTGAATGACAACAATGAGCATCACTTGTCTGTGATTGCTATTGTTGGCATAGGTGGGGTTGGTAAAACAACTTTAGCCCAATGGCTGTACAACAATCAGGAGGAGTTTATGAAGAGATTTGATCTGAAAGCATGGGTTTGCGTTTCGGAGAAGTTTGAAGTTGTTGAGACTACAAGGAATGTCATAAAGCAGATCCATGGAGGTACTTGTAAAGAATTGTCCAATAAGAAGTTCTTTATTGTTCTTGATGATGTTTGGAGTGATGATGGTGACAAATGGAGTAATTTTATGACCCCTTTCCAATATGGGAAGAAGGGAAGTATTGTTCTGCTGACTACTCGGGAGGAAAATGTTGCTTCCGCAGTTCAAAATTGTCGGCCTTATTTTCTCAAGAAGTTGTCGGAGGACTATTGTTGGTCAGTGTTTGCAGAAAATGCATCTTTTCCACAATCAAATGGGAGAGCAGCACTTGAAGAAATAGGTAAAAAGATTGTCAAGAAGTGCGATGGCTTGCCATTAGCTGCAGAAACACTTGGTCGCTTGTTACGTACTAAGCATGATGTTGAGGAATGGAAAAAGATACTAACGAGTCATATTTGGGAATTTTCGGTGGAGAAGAGTAAGATTATTCCAGCATTACTGATAAGTTACTTCCATCTTTCTCCATATTTAAAGCGTTGTTTTGTTTATTGTGCTTTATATCCCAAAGATTATCAATTTGAGAAAGATGAATTAATCCTTTTGTGGATAGCAGAAGATCTTTTACCACCACCAAAGAGAGGGGAGAGTTTAGAAGAAGTTGGTTGTGAGTGTTTTGATGAACTTACTTCCAGATTATTTTTCACAGGGATTGATGATTATTTTGTGATGCACGATCTCTTGCATGACTTAGCAATATTCCCTGCTGGAGATTTCTATTGCAACTCAGAAGAACTTGGTAAAGAGGAGGAGATAAAGATTCAGACTCGGCATTTGTTTGTGGATTTAAGTCATTGTAGCTCAAAACTTTATAATTCTATTTCTAAAGTAGAATCTTTGAGAACATTATTATTGTTTGCCAATTTCTCATCTCCCAACTGCAACACTGAAGCGGCAACATGTGAGATATTATCAAAGTGTAAATACTTGAGAGTTTTACTCCTTAAAAAATTTGATGAGGTGCCTAATTTAATAGGAGAATTGATCCATCTGCGCTACTTAAATCTCTCTTGGACTTATATTAAGACATTGCCAGAGTCTTTGTGCAGCTTGTGTAATTTGCAAACACTGAAATTGTATTATTGTTCTAAGCTAACTACACTGCCTAGTGGTTTGCATAATCTTGTGAGTTTGCGGCATCTTGATATTAGAGGAACTTCTTTGGAAGAAATGCCCAGAAAAATGAGCAAATTGAAAGAGTTGTACGTTTTAAGTTCCTTTGTTGTCGGCAAGCATGAAGACAATGGAATCCAGGAGTTAGGGGGGCTGGAAAACCTTCATGGACCCCTTGAGATTAAGAAGTTGGAGAATATTGTTGATGTGGAGCAAGCAGAGAGTGCAAAGATAATGGATAAGAAGCACATTGATGAATTATGGTTGGAATGGTGTTCAGGTGATGATTTGGTTTCAAGCACAGAAACAGAAAGAGACATGCTGGATAAGTTGCAACCGCAGAATGGGTTGAAAGAGTTGGGAATCACGGGATACAAGGGTACAATATTTCCAGATTGGGTTGGGAATTGTTCCTACCAAAACATGACTCATGTATCTCTGCTGTCTTGCAAGAATTGCTGCATGCTGCCTTCACTTGGACAGTTGCCATCTCTCAAGTCCCTGCGCATTCGAGGTTTCGATCAGCTGAGGAGTATTGGCGAGGAGTTTTACAAGAATGAAGGAGCTCATCATTCTTCGCATATTGCACCATTTCCCTCACTTGAGAGATTGAAGTTTGATGACATGGCATGTTGGGAGGAGTGGCACTTACCTGACTCAAAAGCTTTTCCTCAACTTATGATTCTTCATATAAGAAATTGTGGAATGTTGAAGGAAGAGATGCTTAATCAGGTATTCTTCAGAATCGTTTCTTCTTTGTCGGATGTTTCCAAAGTTCGCAAGCTACATATAGGCGACGAATTTTATCCACAGAAGAAGACCATGAATCTTGATGGGGATCGTTTATCAGTTACGGGATGTGAATCTGTGAGGGAATCTGCATTAAAGGCAATGAAGAGCATGAACCATCTAAGTTGCCTGCAAGAAATGGATATCTCATGGTGTTCCTCTCTTGTATCCTTTCCGGGCAATTGTTTTCCCAAATCTTTGCAAAAGCTGAAACTCTTGAAGTGTAGTAAACTAGAATTCCCGGAGCAACAGCAGCACAAGTATGATTTGGTAGAGCTACAAATAGAAGACAGCTGTGATTCACTGACCTCCTTGTCGTTGGATGTCTTTCCCAATCTCAAGAATCTCCAGATAGAAAGGTGTTGGAATCTGGAATCAGTGTCAATGTCAGAGGCACCACACGCTGCTCTTCAACGTCTCTCCATCTATGACTGCCCTGAATTAGTGTCATTTGCAGGAGAAGGACTGGCTGCACCCAACTTGACTTATCTCAAGATATATGGTTGCCGAAACATTTGCAGGTTACCAAAGGGTGGTTTGCCGCCTAACTTGAAATCACTTGGTGTGGGAATTGGCGAGCAACAAATGAGGGATCTATCATGGATGTCCAACTTGCACGCCCTCACTCATCTCAGGATTGAAGGTCATTACTGCGACAACATAAAGTCATACCCAGAGGTGGGTTCGCTGCCTCACCTTCCCTCCCTTACCACTCTTGAGATATGGTACTTCCATAATCTGGAGACATTGGAGTGCAACGAGCTTCTCCGCCTCACCTCCCTTCAACAATTGCACATTCGTTTCTGTACAAAGCTGGAGAATATGGAAGGAGAAAAGCTGCCTCCCTCTCTCTTGCTACTTGAATTTAGAGGTGTGATTTGCTGGAAGAACACTGCAAGAACAAGCATCAACTAA 3540 0.4153 MAGAVVGGAFLSGFINIVINKCLTEDAVNKVFGKKLGSDLVQRLKTALLGAEALVADAEMKQFGNLNVRKWLDSLRDAVYCAEDLLDAVLLKATTQKNASFSWWSPSFFINQDRDDMVDKIEGVVTRIEDLGKQKDFLGLEKILTGSSSWRTPSSSLVKGSVYGREDDKKALIKMLNDNNEHHLSVIAIVGIGGVGKTTLAQWLYNNQEEFMKRFDLKAWVCVSEKFEVVETTRNVIKQIHGGTCKELSNKKFFIVLDDVWSDDGDKWSNFMTPFQYGKKGSIVLLTTREENVASAVQNCRPYFLKKLSEDYCWSVFAENASFPQSNGRAALEEIGKKIVKKCDGLPLAAETLGRLLRTKHDVEEWKKILTSHIWEFSVEKSKIIPALLISYFHLSPYLKRCFVYCALYPKDYQFEKDELILLWIAEDLLPPPKRGESLEEVGCECFDELTSRLFFTGIDDYFVMHDLLHDLAIFPAGDFYCNSEELGKEEEIKIQTRHLFVDLSHCSSKLYNSISKVESLRTLLLFANFSSPNCNTEAATCEILSKCKYLRVLLLKKFDEVPNLIGELIHLRYLNLSWTYIKTLPESLCSLCNLQTLKLYYCSKLTTLPSGLHNLVSLRHLDIRGTSLEEMPRKMSKLKELYVLSSFVVGKHEDNGIQELGGLENLHGPLEIKKLENIVDVEQAESAKIMDKKHIDELWLEWCSGDDLVSSTETERDMLDKLQPQNGLKELGITGYKGTIFPDWVGNCSYQNMTHVSLLSCKNCCMLPSLGQLPSLKSLRIRGFDQLRSIGEEFYKNEGAHHSSHIAPFPSLERLKFDDMACWEEWHLPDSKAFPQLMILHIRNCGMLKEEMLNQVFFRIVSSLSDVSKVRKLHIGDEFYPQKKTMNLDGDRLSVTGCESVRESALKAMKSMNHLSCLQEMDISWCSSLVSFPGNCFPKSLQKLKLLKCSKLEFPEQQQHKYDLVELQIEDSCDSLTSLSLDVFPNLKNLQIERCWNLESVSMSEAPHAALQRLSIYDCPELVSFAGEGLAAPNLTYLKIYGCRNICRLPKGGLPPNLKSLGVGIGEQQMRDLSWMSNLHALTHLRIEGHYCDNIKSYPEVGSLPHLPSLTTLEIWYFHNLETLECNELLRLTSLQQLHIRFCTKLENMEGEKLPPSLLLLEFRGVICWKNTARTSIN* 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0317 1179 Gene3D - 155 301 IPR027417 -
Amo02g0317 1179 SUPERFAMILY L domain-like 464 860 - -
Amo02g0317 1179 PANTHER DISEASE RESISTANCE PROTEIN RP 30 932 IPR044974 GO:0006952
Amo02g0317 1179 Gene3D - 391 474 IPR036388 -
Amo02g0317 1179 PANTHER OS05G0414200 PROTEIN 30 932 - -
Amo02g0317 1179 Gene3D Ribonuclease Inhibitor 1069 1167 IPR032675 -
Amo02g0317 1179 SUPERFAMILY L domain-like 912 1166 - -
Amo02g0317 1179 SMART LRR_typ_2 569 592 IPR003591 -
Amo02g0317 1179 SMART LRR_typ_2 616 639 IPR003591 -
Amo02g0317 1179 Gene3D - 307 390 IPR042197 -
Amo02g0317 1179 PRINTS Disease resistance protein signature 186 201 - -
Amo02g0317 1179 PRINTS Disease resistance protein signature 343 357 - -
Amo02g0317 1179 PRINTS Disease resistance protein signature 914 930 - -
Amo02g0317 1179 PRINTS Disease resistance protein signature 247 261 - -
Amo02g0317 1179 Gene3D Ribonuclease Inhibitor 860 1063 IPR032675 -
Amo02g0317 1179 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 406 IPR027417 -
Amo02g0317 1179 Pfam Rx N-terminal domain 38 98 IPR041118 -
Amo02g0317 1179 Pfam NB-ARC domain 165 371 IPR002182 GO:0043531
Amo02g0317 1179 Gene3D - 25 131 - -
Amo02g0317 1179 Gene3D Ribonuclease Inhibitor 494 857 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0317 Amo-Chr2 3909880 3914248 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0317 187 473 WRKY Transcription Factor Family AT5G45050 23.734 7.19e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0317 - - adu:110277771 1731.07