Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0315 ATGATGATGATGCAAAATCCTTTGGTGCAAGAAAATATTGATTGGGTTAGTTTCTTCTCTAATGGAGAAAACAACAACTTGTTTATTGGAGAGAATCATAATACCAATAAAGAAACAACAATGGAATGTGCTTCTTCTTCTTTTTATGCTTCTACTTCTACCTCTACTACTTCTATGCCTGTGGATGATATTCTTGATGATGGTTACCGATGGAGAAAATATGGACAGAAAGCTGTGAAGAACAGCATGTATCCAAGAAGCTACTACCGGTGCACTCATCATACATGCAATGTGAAGAAACAAGTTCAAAGGTTGTCCAAAGACACAAGCATAGTGGTGACAACTTATGAGGGAATTCATAATCACCCATGTGAGAAGCTCATGGAAACCCTAACTCCTCTTCTCAAGCAAATGCAATTTCTAGCTAGCTTCTAA 435 0.3747 MMMMQNPLVQENIDWVSFFSNGENNNLFIGENHNTNKETTMECASSSFYASTSTSTTSMPVDDILDDGYRWRKYGQKAVKNSMYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQMQFLASF* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0315 144 SUPERFAMILY WRKY DNA-binding domain 63 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo02g0315 144 Gene3D WRKY domain 49 124 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo02g0315 144 ProSiteProfiles WRKY domain profile. 60 125 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo02g0315 144 Pfam WRKY DNA -binding domain 66 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo02g0315 144 PANTHER WRKY TRANSCRIPTION FACTOR 43-RELATED 55 140 - -
Amo02g0315 144 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 55 140 IPR044810 GO:0003700
Amo02g0315 144 SMART WRKY_cls 65 124 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0315 Amo-Chr2 3872141 3873937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0315 62 144 WRKY Transcription Factor Family AT5G41570 80.723 2.04e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo02g0315 WRKY 9.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0315 - - gmx:100810669 181.415