Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0299 ATGGATCCTCCATCTAAGAGCTGGAGCATCCACACCAGATCCGAAATAATCGCCAAGTACCAAATCCTGGAGCGCGTTGGCGCCGGAGCTTACGCTGACGTGTACCGCGGCCGACGCCTCTCCGACGATCTAATCGTCGCACTCAAAGAAATCCACGATTACCAGTCCGCGTTTCGCGAAATTGATGCGCTTCAGATTCTCCAGGGTTCTCCAAACGTCGTCGTTTTGCACGAGTACTTTTGGCGCGAAGATGAGGACGCTGTGCTCGTGCTCGAGTACCTAAGGACGGATCTCGCAACCGTTATTGATGACGCGAAGAAGAAGAAGAATGGACTCCCCGTTGGGGAGATTAAGCGGTGGATGATGCAGATCCTATGCGGTGTTGACTCGTGTCACCGGAACATGATCGTGCATCGGGATTTGAAGCCCGGTAATCTGTTGATCGGAGATGATGGAATTCTCAAGTTGGCAGATTTTGGACAGGCAAGGATACTTGGGGAGCCAGGATTTGATYCTTCTGAGGAGAACCCACAAACTTATGAACATGATGGTTCTTCACTCCAAGCAGGGTCTGGAAATCAAGAGCAGGGAACTGTCCTTCGCGAAGAATATTTTAGAGTCTTGGATGAACTGAAAACAAAGAGATCTGCAGAGGACATTGATAAGGATACAAACATTCCTGACGGAAATACCTCCTGTCTTGCAACGTGCACAACAAGTGATATAGATGATGACCCTTTGAAATCTAGCTTTAGTTATGAAGCAAGGGAGGACGATGGAGAAGAAGCGGGTTGTCTCACGTCGTGCGTCGGAACTCGTTGGTTTAGGGCTCCTGAGCTGCTTTATGGATCCACAAACTATGGTTTAGAAATTGATCTATGGTCTTTGGGATGTATATTTGCAGAGCTCTTAACACTGGATCCCTTATTTCCTGGAACAGCCGATATCGATCAGCTTAGTAGGATTATTAATGTTTTGGGCAACCTCGATGAGAAAGCATGGCCAGGTTGTTCCAAACTTCCCGATTATGGAATAATCTCATTTAGTAAGGTGGAAAACCCTCCTGGGCTTGAAGCTTGCCTGCCCAATCGCTCCCCCGACGAAGTGGCTCTAGTAAAAAAGCTGGTTTGTTACGATCCGGCCAAGAGAGCTACAGCAACGGAGCTACTCCATGACAAGTACTTTAATGAAGAACCTCTTCCTGTTCCGGTTTCAGAGTTGCATGTTCCTCTGAACAGAAAGGGAGAAGATGAAAACTCCCCGTGGCATGATTACAATTACATGGGTTCTGATTCTGACCTAGAGGACTTTGGCCCTGTGAATATCACAAAAACTGGTACTGGTTTCTCCATACAGTTTCCATGA 1365 0.474 MDPPSKSWSIHTRSEIIAKYQILERVGAGAYADVYRGRRLSDDLIVALKEIHDYQSAFREIDALQILQGSPNVVVLHEYFWREDEDAVLVLEYLRTDLATVIDDAKKKKNGLPVGEIKRWMMQILCGVDSCHRNMIVHRDLKPGNLLIGDDGILKLADFGQARILGEPGFDXSEENPQTYEHDGSSLQAGSGNQEQGTVLREEYFRVLDELKTKRSAEDIDKDTNIPDGNTSCLATCTTSDIDDDPLKSSFSYEAREDDGEEAGCLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELLTLDPLFPGTADIDQLSRIINVLGNLDEKAWPGCSKLPDYGIISFSKVENPPGLEACLPNRSPDEVALVKKLVCYDPAKRATATELLHDKYFNEEPLPVPVSELHVPLNRKGEDENSPWHDYNYMGSDSDLEDFGPVNITKTGTGFSIQFP* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0299 454 MobiDBLite consensus disorder prediction 167 193 - -
Amo02g0299 454 PANTHER CYCLIN-DEPENDENT KINASE 10 12 415 - -
Amo02g0299 454 SMART serkin_6 20 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0299 454 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Amo02g0299 454 SUPERFAMILY Protein kinase-like (PK-like) 13 401 IPR011009 -
Amo02g0299 454 Gene3D Transferase(Phosphotransferase) domain 1 107 398 - -
Amo02g0299 454 ProSiteProfiles Protein kinase domain profile. 20 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0299 454 PANTHER CELL DIVISION PROTEIN KINASE 12 415 - -
Amo02g0299 454 Gene3D Phosphorylase Kinase; domain 1 11 106 - -
Amo02g0299 454 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Amo02g0299 454 Pfam Protein kinase domain 20 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0299 454 Pfam Protein kinase domain 263 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0299 454 MobiDBLite consensus disorder prediction 179 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0299 Amo-Chr2 3774152 3776547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0299 4 454 Core Cell Cycle Gene Families AT4G28980 64.632 0.0 623
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Amo02g0299 Pkinase 1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0299 - - ahf:112726382 901.738