Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0294 ATGGCGACCAAGATAGAAGAGGTGGTTAAAACAATAGAAGATCTTCAGAAACTCAAGGATACCCTTGGTCTTAAAGAGATTCCAACGGGTAGCTCCTCATGGAGACCTCCATCCACTTCTCTTGAAAGGGGGATTGTGTACGGCAGGGATGATGACAAACAGGCATTAATCAAGATGCTAAATGACAACAATCATCATAACTTGTCCGTCATCTCTATTGTTGGTATGGGCGGGGTTGGTAAAACTACTTTAGCACAATGCCTCTACAACAATACAGATTTGATGAAGGGGTTTGATCTGAAAGCATGGATTTGTGTTTCTGAAAATTTTGATGTTGTTGAGACTACCAAGAATCTTATAAAGGAGATCACTTCCGGTGTTTGTTGTCTTGACGGCTTTAATTTACTTCAACAAGATTTGAAGGAAAAATTGTCGGAAAAGAAGTTCTTCGTTGTTTTGGACGATATTTGGAGTAATGATGGTGACAAGTGGAAAAGTTTTATTACTCCTTTTCAATATGGGAGGAAGGGAAGTACTGTTCTTCTAATTACTCGCAAGGAAAATGTTGGTCCAATAGTCCAAAATTATAACAATTACTTTCTCAATGGTCTGTCAGATGATTATTGCTGGTCTATTTTTGCGGACAATTCATCCTTTCCTGAATCAAATGGGAGTTCAGAACTTGAAGAAATAGGTAGAAAGATTGTCAAGAAGTGTGATGGCTTGTCCTTAGCTGCAGAAACACTTGGACGCTTGTTGCGCTCAAAGCATGATGTAGAAGAATGGAATAAAGTACTATCGAGTGACATTTGGGAATTTCCTGTGACAGATAGTAAGATTCTTCCAGCATTGTTAATAAGTTACTATCATCTGCCTGCCTATTTAAAACAGTGCTTTGTTTATTGTTCATTGTATCCCAAAGACCATAAATTTGATAAAGATGAATTAATCTTGCTATGGATGGCTGAAGATCTTTTGCGAGCACCAAAGAGGAGAGAAACTTTGGAAGAAGTTGGTCGTGAATGTTTTGATGACTTTGCTTCAAGACTATTTTTCAAGCAGGTCGAATACAGTGAGAAGTATTTTGTGATGCATGATCTCATGCATGACCTGGCAACTTTTCTTGCTGGAGAATTTTATTGTAGATTATCAGAAGAGCTTGGTGAAAAGGAAGAGATGAGGATTCTGACTCGTCATTTGTCATGCGATTATCCAATCTTTGAAAAACTCTGTTCCTCTAAAAGTATAGAATCTTTGAGGACATTCTTGTTTATCAATAATGCTCAATTTCATGTTAGGAAAGAAAGCACAAGGTTAACATGTGACATATTGTCAAAGAATAAATACTTGAGAGTTTTATCCTTTGATGAACTTTGTGTATTTCCTGATTCAATGGGCAAACTGATCCACTTGCGCTATTTGAATCTCTCTCAGACTGAGATTAAGACATTGCCGGAGTCACTGTGCAAGTTGTGTAATCTACAAACATTAAAGCTAAGATATTGTTCAAAGTTGAGGATGCTACCCAATGGCATGTACAATCTTGTGAATTTGCGGCATCTTGATATATGGGGTACTCATCTAAAAGAAATGCCAAAGGGAATGAGCAAATTGAACCAGTTGCACATTTTAAGCAACTATATCGTAGGCAAGAATGAAGATAGTGGAATCCAAGAGTTAGGAGGGCTTCCAAATCTTCATGGATCATTTGGGATTCAGAAATTGGAGAATGTTATTTATGTCAATCAGGCAAGGAATGCAAAGGTAAGAGATAAGAAGCACATTGACGAATTATGGTTGGAATGGTCTTCAAGTGATGATATGGTTTCTGACACACAAACTGAAAGAGATATACTGGATAACTTGCAACCGCACAATGGCTTGAAAGAGTTGACAATATGGGGATACAGGGGTACAACATTTCCAAATTGGGTGGGGAATTGTTCATACCAAAATATGACTAGTGTATCTCTAGAGTCTTGCAACAATTGCTACTTGCTGCCTTCACTTGGACAGCTGCCATCTCTTCAGTCCCTTCGCATTGATGATTTCGGACAGCTCAAGAGTGTTGGCATGGAGTTTTACAAGAATGAAAGCTATCAACATTCTTCGCCTATTGCACTATTTCCCTCATTGCAGCTTTTGGAGTTTGATAACATGCCATGTTGGGAGGAGTGGTGCTTACCTGACTCAGAAGCTTTTCCTCAGCTTAAGAGCCTTCAAATAAACGATTGTCCAATGTTAAAGGGAGGTATGCTTAATAGTGTGCTAATGCGGATCGTTTCTTCCTCGTTGGATGTTTTGAAAGTGAGCAAACTGGAAATACAAGAAGGTCATCAAGGATGGGGTAAAGAGATGACACTTGATGGAGACAGGTGTTTGTCTGCTATATCCTTTCCAGGAAATTGTTTACCCAAATCATTGCAAAAGCTCACAATCTTGAATTGCAGCAAACTGGAATTCCCCCAGCAACAACAGCAGAAGTATGATTTGGTAGAGCTACGAATAGAACACAGCTGTGATTCACTGACCTCATTGTTATTGGATGCCTTTCCCAATCTCAAGAATCTGGATATAAGAGGGTGTTCAAATTTGGAATCAGTTTCAATGTCAGGGCCACCACATGCTGCTCTTCAACATCTCACCATCTCTAAATGCCTCAAATTAGTGGCATCTCCGGGAGAAGGATTGGCTGCACCCAACTTGACTCATCTCGATGTTAGCTGGTGCTCAAAGTTAGAGGCATTGCCACTTGACATGAATAGTCTTCTTCCAAGTTTACAGTCTCTTGACATTCGAGCTTGTCCGAACATTTGTAGGTTGCCAGAGGGTGGCTTCCTGCCTAAGTTAAGGTCACTTACTGTGGGAGGTTGCGAGCAACAGTTGAGAAGTCTATCATGGATGAGCAACTTGGACACCCTCACTCATCTTACCATTGATGGTTCTAACTGTGAAAGCATCAAGTCATTCCAAGAGGTGGGTTCGTTGCCTCAACTTAACACACTGTGTCTCTTTCACTTTCCAAATCTGGAAACATTGGAGTGCAACGAGCTTCTCTGCCTCACTTCCCTCCAACAATTACATATTTCATTCTGTGAAAAGTTGGAGAATATGGCAGGAGAAAAGCTGCCATGTTCTCTGTTACTACTTCAAATTAAAGAGTGTCGTTTGCTAGGAGAACACTGTAAGAAGAAGCATCAACAAATTTGGCCAAAAATTTCCCACATTCCCACCATTCAAGTAGCTTGTGTACATAGCGAGATATTTGGAAACTTTGTCAAACAGATTTCCCAAGGTGACAACTAA 3306 0.3975 MATKIEEVVKTIEDLQKLKDTLGLKEIPTGSSSWRPPSTSLERGIVYGRDDDKQALIKMLNDNNHHNLSVISIVGMGGVGKTTLAQCLYNNTDLMKGFDLKAWICVSENFDVVETTKNLIKEITSGVCCLDGFNLLQQDLKEKLSEKKFFVVLDDIWSNDGDKWKSFITPFQYGRKGSTVLLITRKENVGPIVQNYNNYFLNGLSDDYCWSIFADNSSFPESNGSSELEEIGRKIVKKCDGLSLAAETLGRLLRSKHDVEEWNKVLSSDIWEFPVTDSKILPALLISYYHLPAYLKQCFVYCSLYPKDHKFDKDELILLWMAEDLLRAPKRRETLEEVGRECFDDFASRLFFKQVEYSEKYFVMHDLMHDLATFLAGEFYCRLSEELGEKEEMRILTRHLSCDYPIFEKLCSSKSIESLRTFLFINNAQFHVRKESTRLTCDILSKNKYLRVLSFDELCVFPDSMGKLIHLRYLNLSQTEIKTLPESLCKLCNLQTLKLRYCSKLRMLPNGMYNLVNLRHLDIWGTHLKEMPKGMSKLNQLHILSNYIVGKNEDSGIQELGGLPNLHGSFGIQKLENVIYVNQARNAKVRDKKHIDELWLEWSSSDDMVSDTQTERDILDNLQPHNGLKELTIWGYRGTTFPNWVGNCSYQNMTSVSLESCNNCYLLPSLGQLPSLQSLRIDDFGQLKSVGMEFYKNESYQHSSPIALFPSLQLLEFDNMPCWEEWCLPDSEAFPQLKSLQINDCPMLKGGMLNSVLMRIVSSSLDVLKVSKLEIQEGHQGWGKEMTLDGDRCLSAISFPGNCLPKSLQKLTILNCSKLEFPQQQQQKYDLVELRIEHSCDSLTSLLLDAFPNLKNLDIRGCSNLESVSMSGPPHAALQHLTISKCLKLVASPGEGLAAPNLTHLDVSWCSKLEALPLDMNSLLPSLQSLDIRACPNICRLPEGGFLPKLRSLTVGGCEQQLRSLSWMSNLDTLTHLTIDGSNCESIKSFQEVGSLPQLNTLCLFHFPNLETLECNELLCLTSLQQLHISFCEKLENMAGEKLPCSLLLLQIKECRLLGEHCKKKHQQIWPKISHIPTIQVACVHSEIFGNFVKQISQGDN* 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0294 1101 Gene3D - 203 286 IPR042197 -
Amo02g0294 1101 Gene3D - 39 198 IPR027417 -
Amo02g0294 1101 Gene3D Ribonuclease Inhibitor 574 764 IPR032675 -
Amo02g0294 1101 Gene3D Ribonuclease Inhibitor 426 573 IPR032675 -
Amo02g0294 1101 Gene3D Ribonuclease Inhibitor 765 944 IPR032675 -
Amo02g0294 1101 SMART LRR_typ_2 468 491 IPR003591 -
Amo02g0294 1101 SMART LRR_typ_2 515 538 IPR003591 -
Amo02g0294 1101 Pfam NB-ARC domain 50 267 IPR002182 GO:0043531
Amo02g0294 1101 PANTHER DISEASE RESISTANCE PROTEIN RP 3 821 IPR044974 GO:0006952
Amo02g0294 1101 Gene3D Ribonuclease Inhibitor 947 1098 IPR032675 -
Amo02g0294 1101 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 302 IPR027417 -
Amo02g0294 1101 Gene3D - 287 374 IPR036388 -
Amo02g0294 1101 SUPERFAMILY L domain-like 801 1070 - -
Amo02g0294 1101 PRINTS Disease resistance protein signature 849 865 - -
Amo02g0294 1101 PRINTS Disease resistance protein signature 239 253 - -
Amo02g0294 1101 PRINTS Disease resistance protein signature 143 157 - -
Amo02g0294 1101 PRINTS Disease resistance protein signature 70 85 - -
Amo02g0294 1101 PANTHER OS05G0414200 PROTEIN 3 821 - -
Amo02g0294 1101 CDD AAA 47 158 - -
Amo02g0294 1101 SUPERFAMILY L domain-like 363 759 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0294 Amo-Chr2 3747242 3751630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0294 67 256 WRKY Transcription Factor Family AT5G45050 26.601 4.75e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0294 - - aip:107624780 1736.47