Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0293 ATGGCTGAAGCACTTTTTGTTGGAGCTTTAGTTTCTGGCTCCATCAGCCTTGTTCTTAACAGGCTCATTTCACCTGAGTTTGTCAACTCGTTGGTGAGCAAGAAGCTGGACCGAAAGTTGGTTGAGAGGCTCAAGACTGCTCTCTTGGCTGCAGAAGCTCTGGCCGCTGATGCCGAGCAGAAGCAGTTTGGAAACGATCGTGTGAGAAAATGGCTTGATAGTCTCAGGGATGCTCTCTACACTGCTGAGGACTTGCTGGATCGTGTCTTCATCAAAGCTCAAATTCGCAAAAAGGTACGCGTTCACCTTCCTCTCCGCCTTAATTTATCTGTTAGGAAGATAGTGACTAAGATAAACGAGATGGTTAAAAGAATAGAAGATCTTCAGAAACTTAAAGATAGCCTTGGTCTCAAAGAGATTCCAACGGGTAGCTCCTCATGGAGACCTCCATCCACTTCTCTTGTGAAGGGGAATGTGTACGGCAGGGATGGTGATCAACAGGCACTAATCAGGATGCTCAATGACAACAATGATCATAACTTGTCCGTCATCTCTATTCTTGGTATGGGCGGTGTTGGTAAAACTACTTTAGCACAATGCCTCTACAACAATGAGGCTTTGATGGAGGAGTTTGATCCGAAAGCATGGATTTGTGTTTCTGAAAATTTTGATGTTGTTGAGACTACAAAGAATGTCATAAAGGAGATCAATTCAGGTGATTGTAGTCTTGACAGCTTCGAATCACTTCAACAAGATTTGAAGAAAAGACTGTCAGAAAAGAAGTTCTTCATTGTTTTGGACGATGTTTGGAGTGAAGATGCTGACATGTGGAATACTTTTATCACCCCTTTTCACCATGGGAGAAAGGGGAGCGCTGTTCTTCTAACTACCCGCAAGGAAAATGTTTGTGGAATAGTCCGACACTATTACTCTTACCCTCTCAAGGAACTGTCAGATGATTATTGTTGGTCTATTTTTGCAGACAATGCATCCTTTCCTGAATCAAATGGGAGCTCAGAACTGGAAGGAATAGGTAGAAAGATTGTCGAGAGGTGTGATGGCTTGCCGTTAGCTGCAGAAACACTTGGACGCATGTTGCGGTCAAAGCATGATGCTGGGGAATGGAATAAAGTACTATCTAGTGATATTTGGCAATTTTCTATGATAGACAGTAAGATCGTTCCTGCATTGTTAATAAGCTACTATCATTTGCCTGCTCATTTAAAACGCTGCTTTGTTTATTGTTCGTTGTATCCCAAAGATCATGAATTTGATAAAGATGAATTAATCTTGTTGTGGATGGCTGAAGATCTTTTACGACCACCAAGGAGGGGGGAGACTTTAGAAGAAGTTGGTTGCGAGTGTTTTGCTCACTTGGCTTCAAGACTATTTTTCAAGCGGGTCCAATATAGTGAAAAGTATTTTGTGATGCATGATCTCATGCATGACTTGGCAACTTTTCTTGCTGGAGATCTTTATTATAAATTCTCCGAAGAACTTGGTGAAAAAGAAGAAATGAGTATTCTAACTCATCATTTGTCATACGATCACTCAATTCCTAAAAAAATATGCTCCTCTAGTAAAATAGAATCTTTGAGGACATTGTTGTATATCAAACATGGAGCTTATACCCGGAAAGAACCCGCAACGTTACCAGGTAACATATTGTCAAAGAATAAATACTTGAGAGTTTTGTCCTTTGATAGACTCAATATACTTCCTGATTCAATAGATAAATTGATTCAACTGCGTTATTTGGGTCTTTCTGGGAGTGGTATTGAGGTATTGCCGCAGTCATTATGCAACATGTGCAATCTACAAACTTTGAAGTTAGAAGGCTGTTCAAAGCTGACTATGCTGCCCAATGGCATGTACAATCTTGTGAATTTGCGGCATCTTAATATAAGGCGTACGCATCTGAAAAAAATGCCAACAGGAATGGGCAAATTACCACGTGGCATGAATAGTCTTCTCCCAAATTTACAGTATCTTGACATACGAGGTTGCCCAAACATTTGTAGGTTGCCAGAGGGAGGTTTGCCGCCTAACCTGAAAGAGCTTAGGGTAGGAGAATGTGAGGAACAAGTGAGGGGTCTATCATGGTTGGGCAACTTGGACAACCTCACTCATCTCACCATTTCTGGTTTACGGTGTGAGAGCATAAAGTTATACCCAGAGGTGGGTTGGCTGCCTCGCCTTCCCTCCCTTACCACTCTACATATCCATGACTTTCATAATCTGGAGACATTGGAGTGCAACCAGCTTCTCGGCCTCACCTCCCTCCAACAACTACACATTTCAGACTGTCCAAACCTGAAGAATATGGAAGGAGAAAAGCTGCCTTCCTCTCTCCAACAATTACACATTTCATGGTGTCATAAGCTGGAGAATATTGCAGGAGAAAAACTGCCTCCCTCTCTCTTACTACTTCAAATTTATGGCTGTCATTTGCTGGGCGAACACTGCAAGAACAAGCATCAACAAATTTGGTCCAAAATTTCCCACATCTGCACCATTCAAGTCGATGACAACCAAATTTTCTGA 2544 0.4186 MAEALFVGALVSGSISLVLNRLISPEFVNSLVSKKLDRKLVERLKTALLAAEALAADAEQKQFGNDRVRKWLDSLRDALYTAEDLLDRVFIKAQIRKKVRVHLPLRLNLSVRKIVTKINEMVKRIEDLQKLKDSLGLKEIPTGSSSWRPPSTSLVKGNVYGRDGDQQALIRMLNDNNDHNLSVISILGMGGVGKTTLAQCLYNNEALMEEFDPKAWICVSENFDVVETTKNVIKEINSGDCSLDSFESLQQDLKKRLSEKKFFIVLDDVWSEDADMWNTFITPFHHGRKGSAVLLTTRKENVCGIVRHYYSYPLKELSDDYCWSIFADNASFPESNGSSELEGIGRKIVERCDGLPLAAETLGRMLRSKHDAGEWNKVLSSDIWQFSMIDSKIVPALLISYYHLPAHLKRCFVYCSLYPKDHEFDKDELILLWMAEDLLRPPRRGETLEEVGCECFAHLASRLFFKRVQYSEKYFVMHDLMHDLATFLAGDLYYKFSEELGEKEEMSILTHHLSYDHSIPKKICSSSKIESLRTLLYIKHGAYTRKEPATLPGNILSKNKYLRVLSFDRLNILPDSIDKLIQLRYLGLSGSGIEVLPQSLCNMCNLQTLKLEGCSKLTMLPNGMYNLVNLRHLNIRRTHLKKMPTGMGKLPRGMNSLLPNLQYLDIRGCPNICRLPEGGLPPNLKELRVGECEEQVRGLSWLGNLDNLTHLTISGLRCESIKLYPEVGWLPRLPSLTTLHIHDFHNLETLECNQLLGLTSLQQLHISDCPNLKNMEGEKLPSSLQQLHISWCHKLENIAGEKLPPSLLLLQIYGCHLLGEHCKNKHQQIWSKISHICTIQVDDNQIF* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0293 847 Coils Coil 41 61 - -
Amo02g0293 847 SUPERFAMILY L domain-like 476 833 - -
Amo02g0293 847 Pfam Rx N-terminal domain 35 97 IPR041118 -
Amo02g0293 847 Pfam NB-ARC domain 166 380 IPR002182 GO:0043531
Amo02g0293 847 Gene3D - 16 131 - -
Amo02g0293 847 PRINTS Disease resistance protein signature 183 198 - -
Amo02g0293 847 PRINTS Disease resistance protein signature 256 270 - -
Amo02g0293 847 PRINTS Disease resistance protein signature 352 366 - -
Amo02g0293 847 PRINTS Disease resistance protein signature 601 617 - -
Amo02g0293 847 Gene3D - 152 310 IPR027417 -
Amo02g0293 847 Coils Coil 111 138 - -
Amo02g0293 847 Gene3D - 316 399 IPR042197 -
Amo02g0293 847 PANTHER DISEASE RESISTANCE PROTEIN RP 32 818 IPR044974 GO:0006952
Amo02g0293 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 415 IPR027417 -
Amo02g0293 847 Gene3D Ribonuclease Inhibitor 654 847 IPR032675 -
Amo02g0293 847 Gene3D Ribonuclease Inhibitor 504 653 IPR032675 -
Amo02g0293 847 PANTHER OS05G0414200 PROTEIN 32 818 - -
Amo02g0293 847 Gene3D - 400 487 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0293 Amo-Chr2 3741849 3744944 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0293 180 815 WRKY Transcription Factor Family AT5G45050 23.088 1.19e-16 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0293 - - ahf:112733081 1698.72