Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0285 ATGTTTGCGCTTGTTGTCCTCTCACCAAACTATGCTTCCTCAAGATGGTGCTTGGATGAGCTGCAAAACATCGTTGAGTGCAGGGAAAAGTTCAACCAAGTGGTTTTTCCTATCTTCTATGGTGTAGAACCCTCTGATGTAAGGTATCAGAGAGGAACCTTTGAAGAAGCTTTCAGAAAACATGAAGAGAGGTTCAAAGAAGAGAAGGGGAAAGTCCAAAGATGGAGAGATGCATTGCAAAAAGTTGCAAGTTATTCCGGTTGGGACTCCAAAGATAATCATGAGGCAGCATTGATTGAAAGAATTGTTGATCACATACAAAAATTACTGATTCCTAAGTTGCCATCATGGGTAGGAAACCTCGTTGGTGTTGAATCAAGGATGAAAAAGTTGAATTCACTCATCGGTATGCAGTTGGATGATGTTCGCTTTATAGGTATATGGGGCATGGGAGGCATAGGAAAAACAACAACTGCCAGATTAATATATGAATCAATCGAAGAGCAGTTCAACTTTAGTTGCTTTCTTGCAAACATTAGAGAGGTTTCTGCAACAAATGGCATAGTTCACATCCAAAGGGAACTTCTTTCTCATCTTTCTGTAAGAAGTAATTACTTTCATAATTTGTTTGATGGGGTAAAAATAATAGCAAACTCTTTGCACAACAAAAAGGTCCTCCTTGTTCTTGATGATATAAGTGAAAGAAGCCAATTAGAGAACTTAGCCGGAAAACAAGAATGGTTTGGTCCCGGTAGCAGAATAATCATCACTACTAGAGATAAGCATCTGCTAATGACACATGGCGTGCATCAGACATGCGAGCTTGAAGGCTTAGTTCAGAAAGAAGCCCTTCATTTATTCTGTCTGAAAGCTTTTAAACAAGATCAACCCAAAAGCAAATATCAGAATTTGTGCAACGAAGTGGTTGAATACACAAGAGGCCTTCCATTGGCACTTGAAGTATTGGGGTCTCATCTTTGTGGAAGAACTCCTGAGGCTTGGCATAGTGCTTTAAAGCAATTAAGAAGTTCTCCACACCCTGAAATCCAAAATTCATTGAAAATAAGTTTTGAAAGTTTGTCGAGCACAGAGAGAGAAATGTTTTTGGATATTGCTTGTTTCTTCAAAGGCATGGACAAGGATGAAGTAGTAGAAGTGTTAGAAAATTGTGGTCATTTTCCACAAATTGGAATTGAAATTTTGATTGAAAAATCTTTGGTCACTCTTGGTAGGGGTAATAAATTGGAAATGCATGATTTACTTCAAGAAATGGGAAAGAATATAGTGTTTCAAGAATCTCCAAATGATCCAGGAAAACGTAGTAGATTGTGGTCTCAAGATGACATCAGCCGTGTGTTGACACAAAATAAGGGAACTGAAGCAATTCAAGCAATAGTACACTATGCTCAACCATATGAAGCAAGATGGAGCTCTGAAGCAATTCAAGCAAAAGTACGCTATACTCGACCATATGAAGCAAGATGGAGCTCTGAAGCTTTCTCCAAGACCAGCAACATAAGGTTGCTAAAGATACGTAATGCGTGTCGTCTTTCCCATGGCCTTGATTGCCTTCCTTATGCACTCAGAGTTCTTGACTGGCAAGGATGCCCTCTGAAAACTCTGCCACTTACTGATCAACTGGATGTTGTTGACATCAATTTGTCTTGGAGCAAAATTGAACAACTTTGGCACGGAAGAAAGATTTTACATAAGTTGAAGTGCATCAACTTGAGTTTTTCCGATAACCTAAACCAAACCCCTGACTTTGTGGAGGTTCCGAATCTCGAATCGTTAGTTCTTGAAGGTTGTACAAGCCTAACCGAAATCCACTCATCTGTTATGCAGCTCAAGAAACTTGTTCAATTGAACTTAAAAGGCTGCAAAAGGCTCAAAGCTCTTCCAGGTAAAATGGAGATGAGTTCATTAAAGGTTTTAAATCTTTCTGGTTGTTCAAACATGAACACTGTCCCAGACTTTGGGAATTGCATGGGACATCTAGCAGAGCTTCATTTGGATGGAACTGCTGTAACAGAGCTACCTTCATCACTAGGATGTCTGGTTGGACTTGTTCTTTTGCATTTACAGAATTGCAGGTATCTTGTTTGCCTTCCGGATACCATTCATAAGTTGAAGTCCCTCAAAGTTCTTAATGTTTCTTATTGCTCGAAACTCCGTAGCTTGCCAGAGTGCCTACAGGAAATGAATAATCTGGAAGAACTTTATGCAAGCAATACTGCCATTGAAGAACTACCCTTATGTTTATGTTATCTAGAAAACATCAAAGTAGTGTCATTTGCTGGTTGCAAAGAGTCAACATCTGAGTTAAATTGCTTTCGAGTTGCATCTGCTGTTTGCGGTCCATCCCTTTTGATAAGGTTAGATTTAAGTTATTGCAATCTACTTGCTGAATCAATACCAGATGGTTTTTGTGGCTTATCTTTGCTGAGGGATTTAGATCTTTCTGGCAACAACTTTGTTAACCTACCAAGCGACATTTCCAAACACACTACGCTTGAATATCTTTGTCTAAACTCGTGCAAGAAGCTTCAGTCATTGCCTGAGCTTCCATTAAGCATAAAAATGATAGAGGCAAGCAACTGTTCCTCATTGGTAACTTCTAAATTCCATCCATCTAGCAAATGCAGCATTTTTGCATCACCTTTACAATGGCACTTACCAAGAGAACAGAAGAGCCTGCTCAAGGGGATTTGCTTTCCGAGAACACGATTCGACATGGTTATCACAGGCAATGAAATTCCATCATGGTTTGCACCTCAAAAGTCCTCTTCCTTTGCAGAAATACCATTTCCTCATCCTTCTCCTCCAACTGAATGGCTGGGATTTGCTCTCTGTTTCTTGCTGGTAGCGGATCGGCCTCTGAGGTATTACCATACAGGGATCACTTGTTACACGGCAAAGCAAACATCAGCCAACGAAATAATGGTACCGGATAAAGATGATTGGAGGGCTGAGACTCACGTGATCAGCAGGAAGGTTCCTGATATGGAGCCAAAACTACCTCACCTTTACATTCTCTTTCTGTCCATTGGAGAATACCTTGAAAGAATGCATACAGATACAAGTATAGGATTCGGTTTGAGGACCAATTCCCGTGGCAGTCCATTGAGAATAGTGCAGGCTGGTTGTCGTGTGGTGTGCATGGAAAATATTCAAGATATTCTTGGAAATCATTCCCACTCTGTAGGGCCTAATAAAAAACAAAAATCAAACAACAACGATGGGCCAAGCCCATAA 3255 0.4015 MFALVVLSPNYASSRWCLDELQNIVECREKFNQVVFPIFYGVEPSDVRYQRGTFEEAFRKHEERFKEEKGKVQRWRDALQKVASYSGWDSKDNHEAALIERIVDHIQKLLIPKLPSWVGNLVGVESRMKKLNSLIGMQLDDVRFIGIWGMGGIGKTTTARLIYESIEEQFNFSCFLANIREVSATNGIVHIQRELLSHLSVRSNYFHNLFDGVKIIANSLHNKKVLLVLDDISERSQLENLAGKQEWFGPGSRIIITTRDKHLLMTHGVHQTCELEGLVQKEALHLFCLKAFKQDQPKSKYQNLCNEVVEYTRGLPLALEVLGSHLCGRTPEAWHSALKQLRSSPHPEIQNSLKISFESLSSTEREMFLDIACFFKGMDKDEVVEVLENCGHFPQIGIEILIEKSLVTLGRGNKLEMHDLLQEMGKNIVFQESPNDPGKRSRLWSQDDISRVLTQNKGTEAIQAIVHYAQPYEARWSSEAIQAKVRYTRPYEARWSSEAFSKTSNIRLLKIRNACRLSHGLDCLPYALRVLDWQGCPLKTLPLTDQLDVVDINLSWSKIEQLWHGRKILHKLKCINLSFSDNLNQTPDFVEVPNLESLVLEGCTSLTEIHSSVMQLKKLVQLNLKGCKRLKALPGKMEMSSLKVLNLSGCSNMNTVPDFGNCMGHLAELHLDGTAVTELPSSLGCLVGLVLLHLQNCRYLVCLPDTIHKLKSLKVLNVSYCSKLRSLPECLQEMNNLEELYASNTAIEELPLCLCYLENIKVVSFAGCKESTSELNCFRVASAVCGPSLLIRLDLSYCNLLAESIPDGFCGLSLLRDLDLSGNNFVNLPSDISKHTTLEYLCLNSCKKLQSLPELPLSIKMIEASNCSSLVTSKFHPSSKCSIFASPLQWHLPREQKSLLKGICFPRTRFDMVITGNEIPSWFAPQKSSSFAEIPFPHPSPPTEWLGFALCFLLVADRPLRYYHTGITCYTAKQTSANEIMVPDKDDWRAETHVISRKVPDMEPKLPHLYILFLSIGEYLERMHTDTSIGFGLRTNSRGSPLRIVQAGCRVVCMENIQDILGNHSHSVGPNKKQKSNNNDGPSP* 1085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0285 1084 SUPERFAMILY L domain-like 417 869 - -
Amo02g0285 1084 SMART till_3 2 85 IPR000157 GO:0007165
Amo02g0285 1084 Pfam TIR domain 2 108 IPR000157 GO:0007165
Amo02g0285 1084 ProSiteProfiles TIR domain profile. 1 110 IPR000157 GO:0007165
Amo02g0285 1084 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 119 679 - -
Amo02g0285 1084 Gene3D - 1 109 IPR035897 -
Amo02g0285 1084 Gene3D Ribonuclease Inhibitor 494 659 IPR032675 -
Amo02g0285 1084 Gene3D Ribonuclease Inhibitor 660 880 IPR032675 -
Amo02g0285 1084 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 119 679 IPR044974 GO:0006952
Amo02g0285 1084 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 657 982 IPR044974 GO:0006952
Amo02g0285 1084 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 88 IPR035897 -
Amo02g0285 1084 Gene3D - 110 272 IPR027417 -
Amo02g0285 1084 SMART LRR_typ_2 663 686 IPR003591 -
Amo02g0285 1084 SMART LRR_typ_2 812 835 IPR003591 -
Amo02g0285 1084 SMART LRR_typ_2 734 757 IPR003591 -
Amo02g0285 1084 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 657 982 - -
Amo02g0285 1084 MobiDBLite consensus disorder prediction 1063 1084 - -
Amo02g0285 1084 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 109 371 IPR027417 -
Amo02g0285 1084 Gene3D - 278 361 IPR042197 -
Amo02g0285 1084 Pfam NB-ARC domain 140 360 IPR002182 GO:0043531
Amo02g0285 1084 PRINTS Disease resistance protein signature 637 653 - -
Amo02g0285 1084 PRINTS Disease resistance protein signature 144 159 - -
Amo02g0285 1084 PRINTS Disease resistance protein signature 219 233 - -
Amo02g0285 1084 PRINTS Disease resistance protein signature 312 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0285 Amo-Chr2 3629107 3651274 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0285 4 772 WRKY Transcription Factor Family AT4G12020 31.658 4.54e-109 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0285 - - ahf:112733264 2020.74