Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0272 ATGAGTACTCAGTCACAACAACAAAAGAAACCACAATTTGAAGATGAAGAAGAAGATAATGAGTTGCTACATTCGGARAGCGAGACAATYCCATTRTCCTCACCATTCGCGAAACAATCGGCGGTTTTAGAGGATGAAAATGCAGAATTTGTGTATGCAGCCAAGGATAAGGTCCAAATATTCGATGTAGAGTCGGCCYGAAGTGGTGGCSCCGGGTCSATGGTGGTGCCACCGTTCTCATGGAAGAAACTCTGGCTCTTTACAGGGCCAGGGTTGCTCATGAGCGTGGCATTCTTGGACCCGGGTAACCTAGAAGGTGACCTACAAGCTGGAGCAATTGCAGGGTACTCTCTGCTTTGGCTTTTGGTCTGGACAACCATCATGGGAGGGCTGCTTCAAGTCCTTTCAGCTCGGCTTGGGGTCGCCACGGGGCGCCACCTGGCCGAATTGTGTAGGGAGGAGTATTCCAATTGGGCAAGGTATGTTTTGTGGATCATGGCAGAGATGGCATTGATTGCTGCTGATATTCAAGAAGTTATTGGCAGTGCTATTGCTCTCAAGATCCTTAGCCATGGGATTTTACCAATTTGGGCTGGTGTGGTTATCACAGCCTTTGATTGTTTCTTCTTTCTGTTTCTTGAGAACTATGGAGTGAGGAAGTTGGAAGGTGTTTTTGCAGTTTTCATTGGAACCATGGCATTTTCCTTTGCATGGATGTTCTTTGATACAAAGCCTAGTGAAGAAGAACTTATCAAGGGCATTTTGATCCCTAGAGTTAACTCAAAAACTCTTCGCCAAGCTGTGGAACTCATTGGATGTGTCATAACACCACACAATGTCTTCCTCCACTCTGCATTGGTGCAATCTCGCGAAATCGATATCCGGAACAAAGGCCAAGTTCAAGAGGCTCTAAACTACTACACAATCGAGTCATCTGTGGCGCTTTTCATCACATTGGTGATCAACCTCTTTGTGATAACAGTCTTTGCCAGAGTGTTCTATGGAACAGAACAAGCCAATGGAATAGGACTAGTGAATGCAGGGCAATTCCTTCAAGAAAAGTATGGAGGAGGTTTGTTTCCAATTCTYTATATWTGGGGAATTGGTTTGTTAGCAGCYGGACAAAGRAGCACAATTACAGGAACATATGCAGGACAATTCATAACTGAAGGGTTTTTGAAGCTAAATATAAAGAAGTGGTTAAGYTCATTGATTACTAGAAGTTGTGCTATTGTTCCAACTATGATAGCTGCTATAGTTTTTAATACATCAGAGAGTTCTTTGGATACTATGAATGAATGGCTCAATGTGGTTCAGTCAATTCAGATTCCTTTTGCACTCATTCCACTTCTTACATTGGTGTCTAAAGAAGAGGTCATGGGAACTTTTAGAATAGGTCCTATTATAGAGAGGGTTTCTTGGTGTGTGGCTGTACTAGTGATAATGGTGTATGGATACATGTTGTTAGGGTTCTTCCTCTCTGAAGTGAAGGGATTGCTGTTTGGTTTTCTTGTATGCATTGGCTTTGTAGCATGGATATCATTCATTGCATATTTAGTTAAACATGGTGGAGCCCTCTCTTCCATCATGATTAGGCCCCCAACTTCAAGAGGCTTTACCCTAACCACTAACAATTAA 1638 0.4274 MSTQSQQQKKPQFEDEEEDNELLHSESETIPLSSPFAKQSAVLEDENAEFVYAAKDKVQIFDVESAXSGGXGSMVVPPFSWKKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLVWTTIMGGLLQVLSARLGVATGRHLAELCREEYSNWARYVLWIMAEMALIAADIQEVIGSAIALKILSHGILPIWAGVVITAFDCFFFLFLENYGVRKLEGVFAVFIGTMAFSFAWMFFDTKPSEEELIKGILIPRVNSKTLRQAVELIGCVITPHNVFLHSALVQSREIDIRNKGQVQEALNYYTIESSVALFITLVINLFVITVFARVFYGTEQANGIGLVNAGQFLQEKYGGGLFPILYIWGIGLLAAGQRSTITGTYAGQFITEGFLKLNIKKWLSSLITRSCAIVPTMIAAIVFNTSESSLDTMNEWLNVVQSIQIPFALIPLLTLVSKEEVMGTFRIGPIIERVSWCVAVLVIMVYGYMLLGFFLSEVKGLLFGFLVCIGFVAWISFIAYLVKHGGALSSIMIRPPTSRGFTLTTNN* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0272 545 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 82 460 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo02g0272 545 Hamap Divalent metal cation transporter MntH [mntH]. 70 492 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo02g0272 545 PRINTS Natural resistance-associated macrophage protein signature 163 189 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo02g0272 545 PRINTS Natural resistance-associated macrophage protein signature 374 393 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo02g0272 545 PRINTS Natural resistance-associated macrophage protein signature 218 239 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo02g0272 545 PRINTS Natural resistance-associated macrophage protein signature 267 290 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo02g0272 545 PRINTS Natural resistance-associated macrophage protein signature 193 212 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo02g0272 545 PRINTS Natural resistance-associated macrophage protein signature 402 419 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo02g0272 545 PRINTS Natural resistance-associated macrophage protein signature 436 455 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo02g0272 545 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 41 542 - -
Amo02g0272 545 MobiDBLite consensus disorder prediction 1 32 - -
Amo02g0272 545 Pfam Natural resistance-associated macrophage protein 105 466 IPR001046 GO:0016020|GO:0030001|GO:0046873
Amo02g0272 545 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 41 542 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0272 Amo-Chr2 3519283 3521414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0272 45 522 Inorganic Solute Cotransporters AT1G47240 72.803 0.0 723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0272 K21398 - gmx:100801411 895.19