Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0262 ATGGCTGAAGTTGTTTCTGGTGTGGCATCAACACTCTTGGCCAATTTAGCAACAAAATCATTCCAAGAGATTACTCTGGCATGTGGTCTTAAAGATGATGTAAAAAAGTTTGAAAGTTCTTTGAGAATCATCAATGCATATCTCATAGATGCTGAGAACAAGCAAGCAAAAAACCGTAGTATAGATGACTGGTTGAAGCAACTCGGTGAGGCATTTGATGATGCTGGTGACATATTAGATGAAATAGAGTATGAAGCAAAACTTAATGAAGTGGTCAAAATGTATGGAAGCATTAGCACCAAGGTCCACCGATTCTTCTCATATACAAGTAATCCACTTGCATTTCGCATCAGAATGGCCCACAAAATCAAAGATATGAAACAGAAGATGGATGAAAAAATAAGAGAAGGGAGAAACTTGGGTATAATTGAACAACATGTCAACACTCCAGCTCCGGAGCACAATTTACCATGGCGAGAGACTACTTCTTCATTGCCTTTCCGTTTGTGTGGTAGACATGAAGAGAAAGAGGAGATTATAAATTTATTGATGAATCAAAAATCAGAAGCTAATGGTATTGATGTGATCTCAGTTGTTGGGATTGGAGGTTTGGGAAAGACTACACTTGCACAAATGGCTTACAATGATACCCAAGTGAAGGCGAATTTCGATCCCTTAATGTGGGTGTGTGTATCTAATGATTTTGATGTGAAGAAGCTAATACAAAGAATTATTCATGCGGCCTCAAAGAGAGAGAATGTGGTGGATGCAAATTCTAGTTTGGAATATATGATATCTCTTCTCAATCAAAATTTACATGGTAAGAGATTCTTACTCGTCTTAGACGATGTTTGGAATGAAAACCACAGCAAATGGGATGAATTGAGAAATCACTTGTTAGAAGCAGGTGGTGACAAAGGCAGCAAAATTATAGTGACCACTCGTAGCCAAATAGTTGTTGACATTGTGGGGAGTAATCTTTCAAAGAAGTTAGAAGGACTTCCTGAGAATGAATGTTGGCGGCTCTTTGTAAAATGTGCATTCCAAGAAGAGAAGGAAGAAGAGAAGTACCCAAGGCTAAAGCAAATTGGAGAGCAAATTGTTGAAAAATGCAAAGGGGTACCCTTGGCTATAACAACTTTGGGTTGCTTGCTTGGATCAAAATCCCATGATGAAAATGAATGGAGAAAAATAAGGGATAGTGAGGTGTGGAATCTCGATCAAGAAGAAACTGACATTTTGCCATCACTAAAATTGAGTTACAATCACTTGGCATCAGAAGTAAAACAATGTTTTTCATACTGCTCATGTTTTCCAAAAGATTATGAATATGAGGTTCTTGAGTTGATTATGTTCTGGATGGCTCATGGACTCCTCCAACCTACAGGCGAAAAGGAAGATGCAGAAGATATAGGGGAGTTGTATATTAAGAAGCTTGTTTCAGCATCTTTACTTCAAATTGAAGGAGATCCTAACCCCGACTTTAAATTCAAAAATTTAATGACATTTAAAAGACTCAAAATGCATGATCTTGTACATGATCTAGCACAATTAACAATGAAAGAGTCGAGCAAGACAAGATCCATTGTGCAAGAGGGACAACAAGAAGCATCAATAGAATGGATCTCTAACAAGTTCAACTATCTGAGGGTGTTGCACCTAAGAAAACATATGGAGTTGAGCTCGTTGCCTGATGATTGCTTTGCCACAATGAAAAAGCACTTGAGATATCTCTTTCTTAGAAATTGTCCTAGTTTGAAAAAGCTTCCTGATTCCATTTGTAAGCTGCAAAGTTTGCTGAGTTTGGGCCTTGGTTGTAACAGCCTTCAAGAACTTCCCAAAAACATGAACAAACTCATCTATCTTCAATATTTGTTTTTGATGGGAATCAAAATTACAAGTTTGTCTTCAATGAATATAGGGCGCTTCCAACAACTTAAATTCTTGTATCTTTTCTATTGTTCAAGGTTAGTGTCTGTACCAAGTGCTGTTGGTCGCTTGACTACTTTAAAAAAGTTGGGTTTTTATGAATGTCAAGAGCTGGTGCATTTTGAGGATGAAGAGGAAGAAGAAAAGCAACATGTGAATTTAAACCTTCAAGTATTCTTTATCCTTGGATCAGAAAAGTTGGATTTTTTACCAAAATGGCTTGAAAGAGCAACTAAATTGCAATATTTGAGTATAGGCATGACAGGAATAAAATCATTGCCCGCAAGGTTGCCGATGACCTCTCTTGAAGAACTTTCTATCTATTGGTGTTTAGAAATGTCATCTCTTCCTAACATGGATCAAACTCATCATCTTCAATATTTAAAGATATCTTTGTGTCCCGACTTATATGCAAGGTACAATAAAGAGACAGGTTCAGATTGGCCCAAAATTGCTCATATTCCATATTGCAAGGTATGGTAG 2412 0.3727 MAEVVSGVASTLLANLATKSFQEITLACGLKDDVKKFESSLRIINAYLIDAENKQAKNRSIDDWLKQLGEAFDDAGDILDEIEYEAKLNEVVKMYGSISTKVHRFFSYTSNPLAFRIRMAHKIKDMKQKMDEKIREGRNLGIIEQHVNTPAPEHNLPWRETTSSLPFRLCGRHEEKEEIINLLMNQKSEANGIDVISVVGIGGLGKTTLAQMAYNDTQVKANFDPLMWVCVSNDFDVKKLIQRIIHAASKRENVVDANSSLEYMISLLNQNLHGKRFLLVLDDVWNENHSKWDELRNHLLEAGGDKGSKIIVTTRSQIVVDIVGSNLSKKLEGLPENECWRLFVKCAFQEEKEEEKYPRLKQIGEQIVEKCKGVPLAITTLGCLLGSKSHDENEWRKIRDSEVWNLDQEETDILPSLKLSYNHLASEVKQCFSYCSCFPKDYEYEVLELIMFWMAHGLLQPTGEKEDAEDIGELYIKKLVSASLLQIEGDPNPDFKFKNLMTFKRLKMHDLVHDLAQLTMKESSKTRSIVQEGQQEASIEWISNKFNYLRVLHLRKHMELSSLPDDCFATMKKHLRYLFLRNCPSLKKLPDSICKLQSLLSLGLGCNSLQELPKNMNKLIYLQYLFLMGIKITSLSSMNIGRFQQLKFLYLFYCSRLVSVPSAVGRLTTLKKLGFYECQELVHFEDEEEEEKQHVNLNLQVFFILGSEKLDFLPKWLERATKLQYLSIGMTGIKSLPARLPMTSLEELSIYWCLEMSSLPNMDQTHHLQYLKISLCPDLYARYNKETGSDWPKIAHIPYCKVW* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0262 803 CDD RX-CC_like 7 132 IPR038005 -
Amo02g0262 803 Gene3D - 159 328 IPR027417 -
Amo02g0262 803 PRINTS Disease resistance protein signature 371 385 - -
Amo02g0262 803 PRINTS Disease resistance protein signature 665 681 - -
Amo02g0262 803 PRINTS Disease resistance protein signature 271 285 - -
Amo02g0262 803 PRINTS Disease resistance protein signature 195 210 - -
Amo02g0262 803 SUPERFAMILY L domain-like 501 777 - -
Amo02g0262 803 Gene3D - 8 124 - -
Amo02g0262 803 Gene3D Ribonuclease Inhibitor 697 789 IPR032675 -
Amo02g0262 803 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 435 IPR027417 -
Amo02g0262 803 Pfam Rx N-terminal domain 9 90 IPR041118 -
Amo02g0262 803 Gene3D - 333 420 IPR042197 -
Amo02g0262 803 PANTHER OS08G0543100 PROTEIN 4 781 - -
Amo02g0262 803 Gene3D Ribonuclease Inhibitor 516 696 IPR032675 -
Amo02g0262 803 PANTHER DISEASE RESISTANCE PROTEIN RP 4 781 IPR044974 GO:0006952
Amo02g0262 803 Pfam NB-ARC domain 174 421 IPR002182 GO:0043531
Amo02g0262 803 Gene3D - 421 515 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0262 Amo-Chr2 3166101 3168729 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0262 193 779 WRKY Transcription Factor Family AT5G45050 24.018 1.63e-14 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0262 - - adu:107473015 1288.86