Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0260 ATGATATCTCTTCTCAATCAAACGTTGCATGGTAAAAAATTCTTACTCGTGTTAGACGATGTTTGGAATGAAAACCATAGCAAATGGGATGAATTGAGAAATCACTTGTTAGAAGCAGGTGGTGACAAAGGCAGCAAAATTATAGTGACCACTCGTAGCAGAAAAGTTGCTGACATTATGGGGAGTAATCTTGTAATGAAATTAGAAGGACTTCCTGAGAATGAATGTTGGCGGCTCTTTGCAAAATGTGCATTCGAAGAAGAGAAGGAAGAAGAGAAGTACCCAAGGCTAAAGCAAATTGGGGAGCAAATTGTTAAAAAATGCAAAGGAGTACCCTTGGCTATAACAACTTTGGGTTTCTTGCTTAGATCAAAATGCCATGATGAAAATGAGTGGAGAAAAATAAGGGATAGTGAGGTGTGGAATCTCGATCAAGAAGAAACTGACATTTTGCCATCACTCAAATTGAGTTACAATCACTTGCCATCAGAAGTAAAACAATGTTTTTCATACTGCTCTTGTTTTTCAAAGGATTATGAATATGTTGCTATTGATTTGATTCTGTTCTGGATGGCTCATGGACTCCTCCAACCTACACGCGAAGAGGAAGATGCAGAAGATATTGGGGAGTTGTATATTAAGAAGAAGTCTCAGTCAAGCAGGACAAGAACCGTTATGCAAGAGGGGCGACAAGAAGCATTGATAGAATGGACCTCCGACAAGTTCAACTATCTGAGGGTGTTGCACCTAACAAAATATATGGAATCAAGCTCGTTGCCTGATGATTGCTTTGCCACAATGAAGAAACACTTGAGATATTTGCATTTGCAAGCTGGAAATTGTCGTAATTTGAAAAAGCTCCCTGATTCCATTTGCAAGCTGCAAAATCTGCAAAGTTTGAGCCTTCGTGGTTTTGACGGCCTCCAAAAGCTTTGTAAAAACATGAAAAATCTCATCTATCTTCAATATTTGCATTTAGAGATGGAAATTACAAGTTTGTCCTCAATGAACATAGGACGCTTCCAACAACTCAAATTCCTGTATCTTTACAACTGTTCAAAGTTAGTGTCTGTACCAAGTGTTGTTGGTCGCTTGACTACTTTAAAGAAGCTGGGTTTTATTTTTTGTGAAAAGCTGGTGAATTTTGAGGATGAAGAGGAAGAAGGAAAGCAACATGTGAATTTAAACCTTCAAGTATTCTTTATCGATGGATTAGAAAAGTTGGAGGCTTTACCAAAATGGCTTGAAAGAGCTACTAAATTGCAATATTTGAGAATAAGGACAACAGGGATAAAATCATTGCCCACAAGGTTGCCAATGACCTCTCTTGAAGAATTTTATATTGTTGCCTGTGAAGAATTGTCATCTCTTCCTAACATGGATCAAACTCATAATCTTCAATATTTAAAGATATCTTATTGTCCCGAATTATATACAAGATACAATAAGAATACAGGTCCAGATTGGCCCAAAATTGCTCATATCCCACAATGCGAGGGGGAAGTTCGTTGTTTCCCTCGGCGAACCTTGATGTTTTCACAAGTTGGGTTTGAGAATAATTTCATGGCGCAAAATATGTTAGAGTATAAGAATACCTTTTATAGGCGAGATCCGATCGACTACATTGCTGGCAGATTAGGCCAAATGGCGCCTCAAGTCTTGCGTACAAGAAGAAACTTACTACAGCAGCCATCCGAGCAGATTAGGTCACACCTTAGACAAGCACGAAATTTAAGCATGTAG 1743 0.3844 MISLLNQTLHGKKFLLVLDDVWNENHSKWDELRNHLLEAGGDKGSKIIVTTRSRKVADIMGSNLVMKLEGLPENECWRLFAKCAFEEEKEEEKYPRLKQIGEQIVKKCKGVPLAITTLGFLLRSKCHDENEWRKIRDSEVWNLDQEETDILPSLKLSYNHLPSEVKQCFSYCSCFSKDYEYVAIDLILFWMAHGLLQPTREEEDAEDIGELYIKKKSQSSRTRTVMQEGRQEALIEWTSDKFNYLRVLHLTKYMESSSLPDDCFATMKKHLRYLHLQAGNCRNLKKLPDSICKLQNLQSLSLRGFDGLQKLCKNMKNLIYLQYLHLEMEITSLSSMNIGRFQQLKFLYLYNCSKLVSVPSVVGRLTTLKKLGFIFCEKLVNFEDEEEEGKQHVNLNLQVFFIDGLEKLEALPKWLERATKLQYLRIRTTGIKSLPTRLPMTSLEEFYIVACEELSSLPNMDQTHNLQYLKISYCPELYTRYNKNTGPDWPKIAHIPQCEGEVRCFPRRTLMFSQVGFENNFMAQNMLEYKNTFYRRDPIDYIAGRLGQMAPQVLRTRRNLLQQPSEQIRSHLRQARNLSM* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0260 580 Gene3D - 1 66 IPR027417 -
Amo02g0260 580 Pfam NB-ARC domain 5 158 IPR002182 GO:0043531
Amo02g0260 580 Gene3D Ribonuclease Inhibitor 210 498 IPR032675 -
Amo02g0260 580 PANTHER OS05G0414200 PROTEIN 5 212 - -
Amo02g0260 580 PANTHER OS05G0414200 PROTEIN 223 482 - -
Amo02g0260 580 SUPERFAMILY L domain-like 221 476 - -
Amo02g0260 580 PRINTS Disease resistance protein signature 108 122 - -
Amo02g0260 580 PRINTS Disease resistance protein signature 8 22 - -
Amo02g0260 580 PRINTS Disease resistance protein signature 339 355 - -
Amo02g0260 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 172 IPR027417 -
Amo02g0260 580 PANTHER DISEASE RESISTANCE PROTEIN RP 5 212 IPR044974 GO:0006952
Amo02g0260 580 PANTHER DISEASE RESISTANCE PROTEIN RP 223 482 IPR044974 GO:0006952
Amo02g0260 580 Gene3D - 70 162 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0260 Amo-Chr2 3148904 3153109 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0260 2 579 WRKY Transcription Factor Family AT5G45050 20.802 1.51e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0260 - - aip:107623432 765.377