Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0258 ATGGCTGAAGTTGTTTCTAGTGTGGCATCAACACTCTTGGCCAATTTAGCAACAAAATCTTTCCAAGAGATTATTCTGGCATGTGGTCTTAAAGATGATATAAAAAAGTTTGAAAGTTCTTTGAGAACCATCAATGCATATCTCATAGATGCTGAGAACAAGCAAGCAAAAAATCACAGTATAGATGAGTGGTTGAAGCAACTCAGAGAAGCATTTGATGATGCTGGTGACATACTAGACGAAATAGAGTATGAAGCAAAACGTAATGAAGTGGTCAAAATGTATGGAAGCATTAGCACCAAGGTCCACCGATTCTTCTCATATACAAGTAATTCACTCGCATTTCGCATCAAGATGGCCCACAAAATCAAAGATATGAAACAGAAGATGGATGAAAAAATAAGACAAGGGAGAAAGTTGGGTATAATTGAACAACATGTCAACACTCCAGTTCTGGAGCATAATTTAGCATGGCGAGAAACTGCTTCTTCATTGCCTTTTCGTTTGTGTGGTAGACTTGAAGAGAAAGAGGAGATTATGAAATCATTGATGACACAAAAATCAGAAGCTAATAGTATTGATGTGATCTCCATTGTTGGGATTGGAGGTTTGGGAAAGACTACACTTGTACAAATGGTTTACAATGATACCCAAGTGAAGGCGAATTTCGATACATTAATGTGGATTTGTGTATCTGATGATTTTGATGTGAAGAAGCTAATACAAAAAATCATTCATGCGGCCTCAAAGAGAGAGAATGTGGTGGATGCAAATTCTAGTTTGGAATATATGATATCTCTTCTCAATCAAAATTTACATGGTAAGAGATTCATACTCGTGTTAGACGATGTTTGGAATGAAAACCACAACAAATGGGATGAATTGAGAAATCACCTGTTAGAAGCAGGTGGTGGCAAAGGCAGCATAATCATAGTGACCACTCGTAGCCAAAAAGTTGTTGAAATTGTGGGGAGTAATCTTGTAATGAAATTAGAAGGACTTCCTGAGAATGAATGTTGGCGGCTCTTTGTAAAATGTGCATTCCAAGTAGAGAAGGAAGAAGAGAAGTACCCAAGGCTAAAGCAAATTGGAGAGCAAATTGTTAAAAAATGCAAAAGGGTGCCCTTAGCTATAACAACTTTGGGTTGCTTGCTTAGATCAAAATCCCATGATGAAAATGAATGGAGAAAAATAAGGGATAGTGAAGTGTGGAATCTCAATCAAGAAGAAACTGATATTTTGCCATCACTCAAATTGAGTTACAATCACTTGCCACCACAAGTAAAGCAATGTTTTTCATACTGCTCTTGTTTTCCAAAGGATTACGACTTTCATGTTATTGAGTTGATTATGTTCTGGATGGCTCATGGACTCCTCCAACCTACACGCGAAGAAGAAGACGCAGAAGATATTGGGGAGTTATATATTAAAAAGCTTGTTTCAACATCTTTACTTCAAATTGACGATGGAGATGATCATTTTCGCCTCTTTGATTTTCAAAATTTAATGACATTTAAAAGACTCAAAATGCATGATCTTGTACATGATCTTGCACAATTAACAATGAAAGAGTCAAGTAAGACAAGAACCATTGTGCAAGAGGGACAACAAGAAGCATCCATAGAATGGACCTCTAACAAGTTCAACTATATGAGGGTGTTGCAACTAAAAAAAGATATGGAGTTGAGTTCGTTCCCTAATGATTGCTTTGTCAAAATGAAGAAGCACTTGAGATATCTCTATCTTGAAAATTGTCCTAGTTTGAAAAAGCAAACTGATTCCATTTGTAAGATGCAAAATTTGCAGAGTTTGTACCTTGATGAGTTTCCCAAAAACATGAAAAATCTCATCTATCTTCAATATTTGTTTTTGATGGGAATCAAAATTACAAGTATGTCCTCAATGAACATAGGGTGCTTCCAACAACTCAAATTCTTATATCTTCAATGTCCAAAGTTAGTGTCCGTACCAAGTGCTGTTGGTCGCTTGACTACTTTAAAGAAGCTGGGCTTTCTTTGGTGTGAAGAGCTGATGAATTTTGAAGATGAAGAGGAAGAAAGGAAAAACACAAATGGTAGTAAATAA 2085 0.364 MAEVVSSVASTLLANLATKSFQEIILACGLKDDIKKFESSLRTINAYLIDAENKQAKNHSIDEWLKQLREAFDDAGDILDEIEYEAKRNEVVKMYGSISTKVHRFFSYTSNSLAFRIKMAHKIKDMKQKMDEKIRQGRKLGIIEQHVNTPVLEHNLAWRETASSLPFRLCGRLEEKEEIMKSLMTQKSEANSIDVISIVGIGGLGKTTLVQMVYNDTQVKANFDTLMWICVSDDFDVKKLIQKIIHAASKRENVVDANSSLEYMISLLNQNLHGKRFILVLDDVWNENHNKWDELRNHLLEAGGGKGSIIIVTTRSQKVVEIVGSNLVMKLEGLPENECWRLFVKCAFQVEKEEEKYPRLKQIGEQIVKKCKRVPLAITTLGCLLRSKSHDENEWRKIRDSEVWNLNQEETDILPSLKLSYNHLPPQVKQCFSYCSCFPKDYDFHVIELIMFWMAHGLLQPTREEEDAEDIGELYIKKLVSTSLLQIDDGDDHFRLFDFQNLMTFKRLKMHDLVHDLAQLTMKESSKTRTIVQEGQQEASIEWTSNKFNYMRVLQLKKDMELSSFPNDCFVKMKKHLRYLYLENCPSLKKQTDSICKMQNLQSLYLDEFPKNMKNLIYLQYLFLMGIKITSMSSMNIGCFQQLKFLYLQCPKLVSVPSAVGRLTTLKKLGFLWCEELMNFEDEEEERKNTNGSK* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0258 694 PANTHER DISEASE RESISTANCE PROTEIN RP 4 666 IPR044974 GO:0006952
Amo02g0258 694 PRINTS Disease resistance protein signature 271 285 - -
Amo02g0258 694 PRINTS Disease resistance protein signature 195 210 - -
Amo02g0258 694 PRINTS Disease resistance protein signature 371 385 - -
Amo02g0258 694 PRINTS Disease resistance protein signature 572 588 - -
Amo02g0258 694 CDD RX-CC_like 7 132 IPR038005 -
Amo02g0258 694 PANTHER OS08G0543100 PROTEIN 4 666 - -
Amo02g0258 694 Gene3D - 421 520 IPR036388 -
Amo02g0258 694 Gene3D - 333 420 IPR042197 -
Amo02g0258 694 Gene3D Ribonuclease Inhibitor 538 687 IPR032675 -
Amo02g0258 694 SUPERFAMILY L domain-like 509 674 - -
Amo02g0258 694 Gene3D - 5 124 - -
Amo02g0258 694 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 435 IPR027417 -
Amo02g0258 694 Gene3D - 155 328 IPR027417 -
Amo02g0258 694 Pfam Rx N-terminal domain 9 99 IPR041118 -
Amo02g0258 694 Pfam NB-ARC domain 175 422 IPR002182 GO:0043531
Amo02g0258 694 Coils Coil 173 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0258 Amo-Chr2 3121471 3127411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0258 193 529 WRKY Transcription Factor Family AT5G45050 25.210 4.45e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0258 - - adu:107473015 1276.92