Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0255 ATGGCTGAAGTTGTTTCTGGTGCGGCATCAACACTCTTGGCCAATTTAGCAACAAAATCATTCAAAGAGATTATTCTGGCATATGGTCTTAAAGATGAAATAAAAAAGTTTGAAAGTTCTTTGAGAACCATCGATGCATATCTCATAGATGCTGAGAACAAGGAAGCAAAAAATCACAGTATAGATGAGTGGTTGAAGCAACTCAGAGAGGCATTTGATGATGCTGGTGACATATTAGATGAAATAGAGTATGAAGCAAAACTTAATGAAGTGGTCAAAATGTATGGAACCATTTGCACAAAGGTTCGCCGATTCTTCTCATATACAAGCAATCCACTTGCATTTCGCATCAGGATGGCCCACAAAATCAAAGATATGAAACAGAAGATGGATGAAAAAATAAGAGAAGGGAGAGACTTGGGTATAGTTGAACAATATGTCAACACTCCAACTCTTGAACACAATTTAGCATGGCGAGAAACTGCTTCTTCATTGTCTTTCCGTGTGTGTGGTAGACTTGAAGAGAAAAAGGAGATTATAAAGTCATTGATGACACAAAAATTAGAAGCTAATAGTATTGATGTGATCTCAATTTTTGGGATTGGAGGTTTGGGAAAGACTACACTTGCACAAATGGTTTACAATGATACCCGAGTGAATGAGCATTTTGATCCTTTAATGTGGGTGTGTGTATCTGATGATTTTGATGTCAAGAAGCTAATAAAAAAAATTATTCATGCGGCCTCAAAGAGAGAGAATGTGGTGGATGCAAATTCTAGTTTGGAATATATGATATCTCTTCTCAATCAAAATTTACATAGTAAGAGATTCTTACTCGTCTTAGACGATGTTTGGAATGAAAACCACAGCAAATGGGATGAATTGAGAAGTCACTTGTTAGAAGTTGGTGGTGACAAAGACAGCAAAATTATAGTGACCACTCGTAGCAGAAAAGTTGCTGACATTGTGGGGAGTAATGTTGTAATGAAATTAGAAGGACTTCCTGAGAATGAATGTTGGAGGCTCTTTACAAAATGTGCATTCCAAGAAGAGAAAGAAGAAGAGAAGTACCCAAGGCTAAAGCAAATTGGGGAGCAAATTGTTAAAAAATGCAAAGGAGTACCCCTGGCTATAATAACTTTGGGTTGCTTGCTTAGATCAAAATCCCATGATGAAAATGAATGGAGAAAAATAAGGGATAGTGAGGTGTGGAATCTCGATCAAGAAGAAACTGATATTTTGCCATCACTCAAATTGAGTTACAACAACTTGCCATCAGAAGTAAAGCAATGTTTTTCATACTGCTCATGTTTCCCAAAGGATTATAAATATGATGGTACTGAGTTGATTATGTTCTGGATGGCTCATGGACTCCTCCAACCTTCACGCGAAGAGGAAGATGCAGAAGATATTGGGGAGTTGTATATTAAGAAGCTTGTTTCAGCATCTTTACTTCAAGTTGAAGCAAATTCTTACCCCTACTTTGATTTCAAAAATTTAATGTCATTTAGAATATTCAAAATGCATGATCTTGTACATGATGTTGCACAATTAACAATGAAAGAGTCGAGCAAGACAAGATCCATTGTGCAAGAGGGACAACAAGTAGAATGGACCTCTAACAAGTTCAACTATCTGAGGGTGTTGCACCTAACAAAAGGTGTGGAGTTGAGCTTGTTGCCTGATGATTGCTTTGCCACAATGAAAAAGCACTTGAGATTTCTCTGTCTTCTGGGTTGTCCTTGTTTGAAAAAGTTCCCTGATTCCATTTGCAAGCTGCAAAATTTGCAGAGTTTGTGGCTTGATGAGTTTCCCAAAAACATGAAAAATCTTGTCCATCTTCAATTTTTGTTTTTTTTGGGAATCAAAATTACAAATTTGTCCTCAATGAACATAGGGCGCTTCCAACAACTCAAATCCTTGTATCTTTACTGTTCAAATTTAGTGTCCGTACCAAGTGCTGTTAGTCGCATGACTACTTTAAAGAAGCTGGTCTTTCTTTGGTGTGATGAGCTGGTGAATTTTGAGGATGAAGAGGAAGAAGAAAAGCAATATATGGTAGTAAATAATTTAAACCTTCAATTATTCTATATCACTGGGTCACGAAAGTTGGATGCTTTACCAAAATGGCTTGAAAGAGTTACTAAATTGCAATATTTGAGAATACACACAACAGGGATAAAATCATTGCCCACAAGGATGCCCATGACCTCTCTTGAACAATTTTATATCCATGACCGTCAAAAATTGTCATCTCTTCCCAACATGGATCTAATTCATAATCTTCAGTATTTGGAAATATTTGGTTGTCCCACATTAAGGGCAAGGTACAATAAGCAGACAGGTCCAGATTGGCCCAAAATTGCTCATATTCCACACTACAAGCTACAACTACTTTATAAATGCTTTAATTATGTTCATCACCTTCTTATAGAGTTATATTCAACTTCTTTATTATGTTCATCTTTACAAATAAAAAAGATAGTCAATTTAAATTAA 2499 0.3629 MAEVVSGAASTLLANLATKSFKEIILAYGLKDEIKKFESSLRTIDAYLIDAENKEAKNHSIDEWLKQLREAFDDAGDILDEIEYEAKLNEVVKMYGTICTKVRRFFSYTSNPLAFRIRMAHKIKDMKQKMDEKIREGRDLGIVEQYVNTPTLEHNLAWRETASSLSFRVCGRLEEKKEIIKSLMTQKLEANSIDVISIFGIGGLGKTTLAQMVYNDTRVNEHFDPLMWVCVSDDFDVKKLIKKIIHAASKRENVVDANSSLEYMISLLNQNLHSKRFLLVLDDVWNENHSKWDELRSHLLEVGGDKDSKIIVTTRSRKVADIVGSNVVMKLEGLPENECWRLFTKCAFQEEKEEEKYPRLKQIGEQIVKKCKGVPLAIITLGCLLRSKSHDENEWRKIRDSEVWNLDQEETDILPSLKLSYNNLPSEVKQCFSYCSCFPKDYKYDGTELIMFWMAHGLLQPSREEEDAEDIGELYIKKLVSASLLQVEANSYPYFDFKNLMSFRIFKMHDLVHDVAQLTMKESSKTRSIVQEGQQVEWTSNKFNYLRVLHLTKGVELSLLPDDCFATMKKHLRFLCLLGCPCLKKFPDSICKLQNLQSLWLDEFPKNMKNLVHLQFLFFLGIKITNLSSMNIGRFQQLKSLYLYCSNLVSVPSAVSRMTTLKKLVFLWCDELVNFEDEEEEEKQYMVVNNLNLQLFYITGSRKLDALPKWLERVTKLQYLRIHTTGIKSLPTRMPMTSLEQFYIHDRQKLSSLPNMDLIHNLQYLEIFGCPTLRARYNKQTGPDWPKIAHIPHYKLQLLYKCFNYVHHLLIELYSTSLLCSSLQIKKIVNLN* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0255 832 Gene3D - 333 420 IPR042197 -
Amo02g0255 832 Gene3D - 421 517 IPR036388 -
Amo02g0255 832 CDD RX-CC_like 7 132 IPR038005 -
Amo02g0255 832 PANTHER DISEASE RESISTANCE PROTEIN RP 6 776 IPR044974 GO:0006952
Amo02g0255 832 Gene3D - 153 329 IPR027417 -
Amo02g0255 832 SUPERFAMILY L domain-like 503 789 - -
Amo02g0255 832 PRINTS Disease resistance protein signature 271 285 - -
Amo02g0255 832 PRINTS Disease resistance protein signature 371 385 - -
Amo02g0255 832 PRINTS Disease resistance protein signature 748 764 - -
Amo02g0255 832 PRINTS Disease resistance protein signature 195 210 - -
Amo02g0255 832 Pfam NB-ARC domain 178 422 IPR002182 GO:0043531
Amo02g0255 832 Pfam Rx N-terminal domain 9 90 IPR041118 -
Amo02g0255 832 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 166 435 IPR027417 -
Amo02g0255 832 Gene3D Ribonuclease Inhibitor 518 831 IPR032675 -
Amo02g0255 832 PANTHER OS08G0543100 PROTEIN 6 776 - -
Amo02g0255 832 Gene3D - 8 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0255 Amo-Chr2 3102253 3105881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0255 178 735 WRKY Transcription Factor Family AT5G45050 23.322 1.84e-13 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0255 - - aip:107623432 1296.18