Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0239 ATGGAACAATTTAGACAGATTGGTAAGGCATTGGGGAGTTTGAAGGCTTTGATGTTATTCAAAGAGAATATTCAAATCAATCAAAGACAGTGTTGCCTTCTTCTTGAAGTGTTCACCTTTGCATATGATACTATTGCAGATGAGATCAAACAGAACCTCAAATTTGAAGAAAGGAATGTGAAATGGAAAGGATTAGAACAACCTTTGAAAGAGATTCACAAGATCTTCAAAGAAGGTGAATCATATGTTAGGCATTGTTTGGAAACAAAGGATTGGTGGGCTAAGGCTATTATATTGTGTCACAACACAGATTCTGTTGAGTTGCATATACATAACTTGATTTGTTGCATGCCAGTTGTGATTGAAGCTATCGAATTGGCCGGAGAAACTTCAGGGATCGATCAGGACGACATGAATAAGAGGAAGTTAATAAATTCTCATAAGTTCAGAACAGAGTTTAGAGATATGAACCTTTTTCAATGGAAATTTGGGAAACAGTATTTAATTACACCTGAGTTTTGCAGCCGATACGAAACGGTTTGGAAGGAGGACAGGTGGTTTCTTCAACAGAAAATGCATGAGAAGAAGATGGCAGGAGCAACAAAGCAAGAGAGAAGATTGATAGAACTTATTTTGAAGAATTTGCAAGAATCATGGGAAGGGAAGCTTATTCCAAGTTCAACCTTGGTTGGATCTAAGGACTTCCAGGTTAAGAGAAGGATGGGGAATGGACAAGACAAGGAAATTGCGTGGTTAGGCGAAAGCTTCGTGATCAAGCATTATACCGGAGAAATCGAAGCTTGGGAGCCAGAGATCAGAGAAGTTTTGTCTCTGTCTCATCCAAACATAATGGATGTTCTTTGTGGTTTCACTGATGATGACAAGAAAGAATGTTTCTTGCTTATGGAAGTTATGAGCAAAACATTAAGCACTTACATCAAGGAGATCCATGGCCCCAAGAAGCAGAAACCGTTCTTACTCCATGTCGCGATCGATCTTATGCTTCAGATTGCGCGAGGAATGGAATACCTGCATTCAAAGAAAATTTATCATGGAGAGCTAAATCCTTCAAACATTCTTGTTAAGCCAAGAGGTAACTTGCCTGATGATTACTTGCATGCCAAGGTAACTGGTTTTGGCCTATCTTCGGCCATGGAATCAAACCAGAAAGGGGGTACAAATCAAAATCAGAATGGAACTTCACCATTCATCTGGTATGCTCCAGAAGTACTTGAAGAGCAAGAAAATTCCGGGGGTGCCTTGCAATGCAAGTATTCAGAGAAATCTGATGTTTATAGCTTCGGAATGGTTTGCTTTGAACTTCTAACAGGTAAAGTCCCTTTTGAAGATAGTCATCTACAAGGAGAGAAGATGAGTAGGAACATAAGGGCAGGGGAGAGGCCACTTTTCTCGCTAAATTCGCCGAAATATGTCATCAACTTGACAAAGAAATGTTGGCATACAGACCTGAATCAGCGTCCGAGCTTCTCTTCCATCTGTAGAATTCTCCGGTACATAAAACGGTTTCTTGCCATGAATCATAGTCATATCACTCAATTAGAGGCACTGGCGCCAACGCCGGCTGTAGATTACTGTGACATAGAGACTGCACTTTTGAAGAAGTTTCCTACTTGGGGGAATTCTGAATCTACATCGATATCACAAATTCCTTTTCAAATGTTTTCTTATCGAGTTGCAGAACGAGAGAAAACAGGTACATACTCTAAGGAGAACTCTGAATCTGGAAGCGACGCTTCAGCGTGTGGCGATGATCTTGCTACCTCTGGAGATGAGGCATTCATATCATCCACAAATGAAAAGAAGATTTGCCCTGCAAATGAAAGCATGAGTACCAAGAAGCATTCACTAGCAAGGAAATCATTAGATTTTAATAAGCCAATAAAACAGCAAGTTACACCAAGATCAGCAAGGCCTCCGCAGATGTCGTCTTTTGGGCGGCCGAAGAGGACTAGTTCGGACCAGCAAACATCGAATTCAAGAACAAGAAGAACAGCTTCGGGTCATGTCTCGGATTCCGAGCTCTCTTAG 2049 0.409 MEQFRQIGKALGSLKALMLFKENIQINQRQCCLLLEVFTFAYDTIADEIKQNLKFEERNVKWKGLEQPLKEIHKIFKEGESYVRHCLETKDWWAKAIILCHNTDSVELHIHNLICCMPVVIEAIELAGETSGIDQDDMNKRKLINSHKFRTEFRDMNLFQWKFGKQYLITPEFCSRYETVWKEDRWFLQQKMHEKKMAGATKQERRLIELILKNLQESWEGKLIPSSTLVGSKDFQVKRRMGNGQDKEIAWLGESFVIKHYTGEIEAWEPEIREVLSLSHPNIMDVLCGFTDDDKKECFLLMEVMSKTLSTYIKEIHGPKKQKPFLLHVAIDLMLQIARGMEYLHSKKIYHGELNPSNILVKPRGNLPDDYLHAKVTGFGLSSAMESNQKGGTNQNQNGTSPFIWYAPEVLEEQENSGGALQCKYSEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFSLNSPKYVINLTKKCWHTDLNQRPSFSSICRILRYIKRFLAMNHSHITQLEALAPTPAVDYCDIETALLKKFPTWGNSESTSISQIPFQMFSYRVAEREKTGTYSKENSESGSDASACGDDLATSGDEAFISSTNEKKICPANESMSTKKHSLARKSLDFNKPIKQQVTPRSARPPQMSSFGRPKRTSSDQQTSNSRTRRTASGHVSDSELS* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0239 682 SUPERFAMILY Protein kinase-like (PK-like) 231 512 IPR011009 -
Amo02g0239 682 MobiDBLite consensus disorder prediction 632 682 - -
Amo02g0239 682 MobiDBLite consensus disorder prediction 611 682 - -
Amo02g0239 682 Gene3D Transferase(Phosphotransferase) domain 1 226 523 - -
Amo02g0239 682 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE 1 630 - -
Amo02g0239 682 Pfam Protein tyrosine and serine/threonine kinase 265 502 IPR001245 GO:0004672|GO:0006468
Amo02g0239 682 Pfam Protein of unknown function (DUF1221) 21 232 IPR010632 -
Amo02g0239 682 PANTHER SERINE-THREONINE PROTEIN KINASE 1 630 - -
Amo02g0239 682 ProSiteProfiles Protein kinase domain profile. 224 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0239 Amo-Chr2 2751903 2754423 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0239 234 514 MAP Kinase Kinase Kinase AT1G14000 30.508 1.52e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Amo02g0239 PK_Tyr_Ser-Thr 1.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0239 - - gmx:100813704 967.222