Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0223 ATGAGTTGCTTTTCATGTTTTTCAAGCCATGAAAAGAAGACAGAAAAGAGGTCAAGGAGGAATGATCATAATGATCAACACCATAAAGCAGAAACGCCTCATCAACCTCTCAAGGAATTAGCCAAACATCATCATCATCATCAAAATAATAATAATTATCAGAACAAGGCAAGGGGAGGCCAACAAACAGAATCTAAAATATTAAACAAAGAAGGAAACAAAGACACAGGAAGCAATAACATTGCTGCACAAACGTTCACTTTTCGTGAATTAGCTACTACTACAAAGAACTTCAGGCAGGAGTGCCTAATTGGGGAAGGTGGATTTGGTAGGGTTTATAGAGGACGACTTGAAAAGACAAACCAAGAAGTAGCTGTAAAGCAACTTGACAGGAATGGATTGCAAGGGAACAGAGAGTTCCTTGTTGAAGTGTTAATGTTGAGCTTGTTACACCATGAGAATCTGGTGAATCTAATTGGATATTGTGCTGATGGAGATCAAAGACTATTAGTATACGAGTACATGCCATTGGGATCTCTTGAGGACCATCTTCTCGATCTTCTTCCACAACAAAAGCCACTAGATTGGTTCAAAAGAATGAAAATAGCATTACACGCCGCAAAAGGGTTAGAATATCTTCACGACAAAGCCAATCCACCAGTGATCTACCGTGACTTAAAATCCTCAAATATTTTGCTGGATAGGGATTTCAATGCAAAATTATCAGATTTTGGACTCGCAAAGCTTGGACCGACAGGGGACAAGACTCATGTGTCTTCAAGAGTGATGGGAACTTATGGATACTGCGCTCCCGAGTATCAAAGAACTGGGCAGCTTACAGTAAAATCAGATGTCTATAGTTTCGGTGTTGTGTTGCTCGAATTGATCACCGGAAGGAGAGCCATTGATAATACTAGACCAGCAAGGGAGCAAAATCTAGTTGCCTGGGCATATCCAATATTCAAGGAACCAAGCAGATACCCAGAACTAGCAGATCCCCTTCTAGAAGGAAACTGCCCAATGAGATCATTACACCAAGCAGTTGCAGTAGCAGCCATGTGCCTCAATGAAGAACCATCAGTGAGGCCATTAATCAGTGACGTTGTAACTGCCCTCAGCTTCCTAGGAACAACCCCAGTAGGCCAGGATGGGAATAACAATAATAGAATTGCACCCATTGACATGCCGTCACCGCCACTGGAGCGAGGAACAGACGTCGTTGGTGCCGCGGCGGGCAGTACGGTCACTTTTAACTTAATGGATGATGATAGCATTGCTGAGCGACAAAGAGCTGTGGCTGATGCCATTGAATGGGTTTCCAATAACACAAGGAAATAG 1338 0.426 MSCFSCFSSHEKKTEKRSRRNDHNDQHHKAETPHQPLKELAKHHHHHQNNNNYQNKARGGQQTESKILNKEGNKDTGSNNIAAQTFTFRELATTTKNFRQECLIGEGGFGRVYRGRLEKTNQEVAVKQLDRNGLQGNREFLVEVLMLSLLHHENLVNLIGYCADGDQRLLVYEYMPLGSLEDHLLDLLPQQKPLDWFKRMKIALHAAKGLEYLHDKANPPVIYRDLKSSNILLDRDFNAKLSDFGLAKLGPTGDKTHVSSRVMGTYGYCAPEYQRTGQLTVKSDVYSFGVVLLELITGRRAIDNTRPAREQNLVAWAYPIFKEPSRYPELADPLLEGNCPMRSLHQAVAVAAMCLNEEPSVRPLISDVVTALSFLGTTPVGQDGNNNNRIAPIDMPSPPLERGTDVVGAAAGSTVTFNLMDDDSIAERQRAVADAIEWVSNNTRK* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0223 445 SUPERFAMILY Protein kinase-like (PK-like) 84 379 IPR011009 -
Amo02g0223 445 CDD STKc_IRAK 104 372 - -
Amo02g0223 445 ProSiteProfiles Protein kinase domain profile. 98 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0223 445 Gene3D Transferase(Phosphotransferase) domain 1 175 387 - -
Amo02g0223 445 MobiDBLite consensus disorder prediction 1 63 - -
Amo02g0223 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Amo02g0223 445 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Amo02g0223 445 PANTHER OS07G0668900 PROTEIN 1 439 - -
Amo02g0223 445 Gene3D Phosphorylase Kinase; domain 1 67 174 - -
Amo02g0223 445 MobiDBLite consensus disorder prediction 9 38 - -
Amo02g0223 445 Pfam Protein kinase domain 100 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0223 445 SMART serkin_6 98 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0223 445 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL26-RELATED 1 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0223 Amo-Chr2 2450479 2454202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0223 1 438 Glycoside Hydrolase AT3G07070 65.909 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Amo02g0223 Pkinase 8.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0223 - - gmx:100786405 642.884