Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0215 ATGGATAATACTATTGTTCTCTTCACACTAAGCTTTCTTCTTGTATCTTCAAATGGCATCATGTCACAGCAGAATTATTCAGGAAACTCAGTACTAAATTGCAACAACAACGACGCAGAGGGTCCTTCTTCAGATTTCCTATACACCTGCAATGGATTCCAAAAATCTTGCTTAGCCTTTCTCATATTCAAATCCCAAACTCCTCACAACACCATTGCCACAATCTCCAACCTCACTTCCTCAAACCCAGAGGACCTTGCAAGGTTCAACAACGCCTCTCATTCCACACTGTTCCGAACCGGCAAAGAAGTCATTGTCCCTCTCAATTGTTCTTGTCCAACCAGAGAACATGATGATGATTATGATGAGTACTATCAAGCCCAAACCACATACGTTCTGCCAAAAGATCCAACATATTTTACAACAGCAAATGATACCTTTCAGGGATTAACCACGTGCGATTCTCTCCAGCGTTACAATCCTTATGGGGTTCTTGATTTGCATCCTGGCATGGTGTTGCACGTGCCCCTCAGATGCGCTTGTCCGACGGCGCGTCAAGCCGTCAGCGGCACCAAGTATTTGCTGACCTACTCGGTTAATTGGGGTGATAACATCTCTAATATCGCAACACGGTTCCATGTCAACGCAAGTAGTATGGTTGATGCCAATGGTTTCTCCTCAGAAAATGAAATGCTCTATCCATTCACAACTGTCCTGATTCCATTAACAAGTGAACCCAACAGCACAATAACCAAAGTTCAAAATGGTCAACCACCTTCTCCAACTACTCTTTACACTGTAAGAAATGATAAGACAAAGACAAAAAGAAAAAGAATCATAGTTGCTCTTACTTCCTCTTCGAGCTTCTTGTTTTTTCTGTTTGTCGTTGTATCCCTAGTGTTTGTGCGTAGAAAGAGATTAGAAATTTTCTTCAGGGGAGATAGAAAAGGCAGAACAAAGCAAGTGTTTGCAGAACAAATACGTGAAGGGTTAGCAAGCATTGAGCTTCTTTCCAAAGTGTACAAGTTTGATGAAATTAAAGAAGCAACTGAGAATTTCAGTGCAAGCAACAGAATCAAAGGCTCTGTCTACCGTGGGGTATTTGGTAAGGAGARGGAAATCATGGCGATCAAGAAGATGAATTTGGGTGCCTCTAARGAAGTGAATTTGTTAGGAAGGATCAATCACTTCAACCTGATAAAGCTGGAAGGTTACTGTGAAAAAGATGGATCCTTCTATCTTGTTTTTGAGTACATGGAAAATGGTTGTTTGAGAGAATGGCTTGGGAGAAGAAACAGAACCAYAGAACACCAATGTTGGAGAAAGAGGATTCGRATTGCTGTGGATRTTGCAAATGGACTTGAGTATCTTCATAACTTCACAGATCCTTGCTATGTTCACAAGGCCATAAACACTGAYAATATATTGCTAAATAAAGATCTAAGGGCCAAGATAGCGAATTTCACTCTGGCTAAAGAATCAGATAGAGAAGTAACAAGCTCTTGTTCTTATTACACATCACATGTTGTGGGAACCAGAGGTTATATGGCTCCAGAGTATCTTGATTCAGGGAGAGTCACATCGAAGATGGATGTGTATGCGTTCGGAGTGGTGCTGTTGGAATTGATCACTGGCAAAGATTCTATTATTGTGCAGGATGATGGAAGTGAGACGATGCTTTCATCAATCATATTGAACCTCATTGACAAAGATGATGCAGAAGAGAAACTCAGTTTGTTCATTGATCCTAGTCTCGTGGGAAACAGTGAGAAGGTCTATGCAATTCAGCTAGTTAAGCTAAGCCTAGCATGCTTGGTTGAAGAACCTTCAAGGAGACCAAACATGGCCGAAGTGGTCTCGAGTTTGCTTAGAATATATACAGAAATTGAGATAAGAACGTCACCCTGCCGCATCAATGACAGTGGAAGCACGGAGAGTTTTCATATGTGA 1950 0.4118 MDNTIVLFTLSFLLVSSNGIMSQQNYSGNSVLNCNNNDAEGPSSDFLYTCNGFQKSCLAFLIFKSQTPHNTIATISNLTSSNPEDLARFNNASHSTLFRTGKEVIVPLNCSCPTREHDDDYDEYYQAQTTYVLPKDPTYFTTANDTFQGLTTCDSLQRYNPYGVLDLHPGMVLHVPLRCACPTARQAVSGTKYLLTYSVNWGDNISNIATRFHVNASSMVDANGFSSENEMLYPFTTVLIPLTSEPNSTITKVQNGQPPSPTTLYTVRNDKTKTKRKRIIVALTSSSSFLFFLFVVVSLVFVRRKRLEIFFRGDRKGRTKQVFAEQIREGLASIELLSKVYKFDEIKEATENFSASNRIKGSVYRGVFGKEXEIMAIKKMNLGASKEVNLLGRINHFNLIKLEGYCEKDGSFYLVFEYMENGCLREWLGRRNRTXEHQCWRKRIRIAVDXANGLEYLHNFTDPCYVHKAINTDNILLNKDLRAKIANFTLAKESDREVTSSCSYYTSHVVGTRGYMAPEYLDSGRVTSKMDVYAFGVVLLELITGKDSIIVQDDGSETMLSSIILNLIDKDDAEEKLSLFIDPSLVGNSEKVYAIQLVKLSLACLVEEPSRRPNMAEVVSSLLRIYTEIEIRTSPCRINDSGSTESFHM* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0215 649 Pfam LysM domain 197 241 IPR018392 -
Amo02g0215 649 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 4 633 - -
Amo02g0215 649 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE 4 633 - -
Amo02g0215 649 SUPERFAMILY LysM domain 195 241 IPR036779 -
Amo02g0215 649 ProSiteProfiles Protein kinase domain profile. 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0215 649 SMART LysM_2 196 241 IPR018392 -
Amo02g0215 649 CDD LysM 196 240 IPR018392 -
Amo02g0215 649 ProSiteProfiles LysM domain profile. 195 240 IPR018392 -
Amo02g0215 649 SUPERFAMILY Protein kinase-like (PK-like) 333 622 IPR011009 -
Amo02g0215 649 Gene3D LysM domain 195 253 IPR036779 -
Amo02g0215 649 Pfam Protein kinase domain 361 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0215 649 Gene3D Transferase(Phosphotransferase) domain 1 419 639 - -
Amo02g0215 649 Gene3D Phosphorylase Kinase; domain 1 328 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0215 Amo-Chr2 2377666 2379957 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0215 10 625 Receptor kinase-like Gene Family AT2G23770 37.757 4.14e-119 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Amo02g0215 Pkinase 2.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0215 - - aip:107641252 771.155