Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0190 ATGCATATTCAGTTTTCAGCTCAAAAGCTCCATATCCATTTCAAATTTCCCGGTTGTAGCTTGCCGCCCTCAAAAATGGTGGTGGATCGTTTCGATTCTTGCATTGCTTTTGGTGGGAAGGGTTTTGGTTGTGCTTTTCTCGGGAACTCAAGAACTATCCTGAAAGCGCGGTTTAGCGGCATGAACAAGATTGGTATTGCTGCTGCATGTAGTAGTAGTAGTAGTTGGAGGAGTAATAATTCAAGATTGGCTTGTGTAGGAGAGTTCAACTTTTCAAATGTGAAGAGAATAGGGAAACTTTGTGGCAACAGTTCTAATTTTCGCGTTGTGGGAGGTAGGGGATTTTTGTCTAGGTGCCAGGGTGATGATGATTCTTTAGCATATATTAATGGCAATGGCCGGAATATTGATAATGCTGGAGGGGGTCCGAATAAGGTGGGTTCTGATTTGGGTTCCATTTCAGGAGCTGCATCGAGTGAACCCTTGGAAGTCGAAAGAACAATTGGGGGTGAAATAAAGCAAGAGGTACAGACAGTGGATGAATTGAAAGAACTGTTGCAAAAGGCCTTGAAGGAACTCGAAGTTGCTAGGCATAATAGTGCCATGTATGAGGAGAGGGTCAAGAAGATATCGGAGAGTGCGATTTCCTTTCAGGATGAAGCATCAAGAGCATGGAATGATGTTAATTCTACTCTTGATATCATCCAGGAAATTGTGGGTGAAGAATTTGTTGCCAAGGAAGCTGTTCAGAAAGCGACTATGGCTCTTTCTTTTGCCGAGGCTAGGCTTCAAGTAGCCATGGAGTCTTTGGAGGTTGTAAAAGGAACTTATGATCCTCGGTCACAAGGTGCCAAAGAGAGTAATGGCGATGAAGATATATTGGAAGAGGAGCAATTGCTTGTGGTTGCTCAAGAAGATATCAAGGAGTGTCAGTCAAATTTAGCGAATTGCGAGACAGAGCTAAGGTGCTTGCAAAAAAGAAAGGAGGATTTGCAGAATGAAGTGAACAAGTTGCATGAAATTGCGGAAAAGGCCCAGATGAATGCAGTAAAAGCCGAGGAGGACGTCACAAACATAATGCTTTTAGCTGAGCAAGCTGTTGCTGATGAACTTAAGGCTGCACAAGTCGTAAATGATGCAGAGATTGCATTATCAAAAGCAGATAAGTCTGCCTCTAGCGTTATTGCTGACTCTGGTATCACTCTACAAGAACAAGAGGTTTTGGACGATCCTAAGGAAGAGGTGGTTCAAAATGTTTCTGGCGATGACACTGTTGATACAGACACAGATTCCCAAATTGACAATGAAACTTTGCTTGGCAAGCAATCATCAGACAAGTTTTCTGATAAAACCAGCCAAGTTATTGAAGATACGGCACAGTCTGATTATCTGAGTGATCATGAAAATGGACAGTTAGTCTTAGACCCATCTAAAGAAGCTGAAGTTGAAGTAGAGAAAATAATGAATTCAGTTCAAATGAAAAAACAGGAAACACAGAAAGATATAAGAGACAATCCACCACTTGTTCCCAAGGCATTGTTGAATAAATCTTCCAGATTTTTTCCTGCATCATTCTTCTCTTTTACTATCGAAGGTGATGATTATACACCAGAATCATTTTTCCAAAGTTTCGTGGAGTCAGCACGGAAGCTGTTACCCAAGCTAGTTATTGGGATATTGTTACTTGGAGGGATTGCCTTCTATGCAAACAGAGCAGAGAGGAGTGCGCAATTACTTCAGCAACCAGAAGTAATTACAACCACTGCTGAAGAAGTTTCCACAAGTGCAAAACCTTTGGTTAGACAGCTTCAGAATCTCCCCACGAGGATCAAGAATATTATTGCATCATTACCTGATCAAGAGGTGGATGAGGAGGAAGCATCCCTTTTTGATATGCTTTGGTTATTACTTGCTAGTGTTATTTTTGTGCCAGTGTTTCAGAAAATCCCTGGAGGCAGTCCCGTTCTTGGTTACTTGGCTGCTGGTATCCTTATTGGGCCCTATGGTCTGTCCATCATTCGTCATGTTCATGGGACGAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTGTTATTCAATATTGGCCTTGAGCTCTCTTTTGAAAGGCTTAGTTCAATGAAGAAATATGTCTTTGGATTAGGCTCAGCTCAGGTTTTGGTGACTGCTGTTGTTGTTGGCCTAGTAGCTCATTATGTTTGTGGTCAAGCAGGTCCTGCTGCTATTGTCATTGGGAATGGCCTCGCATTATCATCAACCGCTGTTGTTCTGCAAGTATTACAGGAGAGAGGTGAGAGCACATCACGCCATGGACGAGCCACATTTTCTGTGTTACTTTTTCAGGACTTGGCGGTTGTGGTCTTGCTAATTCTCATACCTCTTATTTCACCAAATTCATCTAAAGGAGGGGTTGGTTTTCAAGCTATTGCTGAAGCTCTTGGTCTGGCTGCTGTTAAGGCAGCAGTTGCCATCACTGTCATTATTGCAGGTGGACGATTGCTACTTCGACCAATATATAGGCAGATTGCAGAAAATCAAAATGCAGAAATATTTTCTGCCAATACACTCTTTGTTATTCTTGGGACAAGTCTTCTCACAGCCAGGGCAGGGCTTTCCATGGCACTAGGAGCATTTTTGGCTGGTTTACTACTAGCAGAAACTGAATTTTCCTTACAAGTGGAATCTGACATTGCTCCATATCGTGGTCTTCTGTTAGGTCTGTTCTTTATGACGGTTGGAATGTCAATTGATCCAAAACTTCTTGTTTCAAAATTTAAAGTCATTATGGGGACGCTGGCACTCTTACTATGTGGCAAGACACTGTTGATTACTGTGATTGGTAGAATTTTCGGTATTTCACTCATTAATGCCATAAGAGTTGGCCTCCTTCTTGCTCCTGGGGGAGAATTTGCATTTGTGGCCTTTGGTGAAGCTGTTAATCAGGGCATAATGTCTTCCCAGATGTCCTCTCTGCTGTTTCTTCTTGTGGGAATCTCAATGGCCCTCACACCATGGCTAGCTGAAGGAGGACAGCTGATTGCTTCCCGTTTTGAGCTACATGATGTTAGAAGTTTATTACCTGTAGAAAGTGAGACAGACGATCTGCAAGATCATATCATTATTTGTGGATTTGGACGAGTTGGCCAGATCATTGCACAACTTCTTTCGGAGCGACTTATTCCTTTTGTTGCACTAGACGTCAGAAGTGATAGAGTGGCAATTGGGCGTGCCCTGGATCTCCCAGTGTACTTCGGAGATGCTGGTAGCCGAGAGGTCCTACATAAGGTCGGGGCTGAAAGGGCGAGCGCTGCTGCAGTAACTCTAGATTCTCCTGGTGCAAATTATAGAACAGTTTGGGCTTTAAGCAAGCACTTCCCGAAAGTGAAGACCTTCGTCCGTGCTCATGATGTTGATCATGGATTGAACTTAGAAAAGGCTGGAGCCACTGCTGTTGTCCCAGAGACCTTAGAACCAAGTCTTCAACTAGCAGCTGCAGTGCTAGCTCAGGCTAAACTTCCAACAACAGAGATTGCAGCAATCATAAATGAATTCAGATCACGCCATTTAGCCGAGCTCACCGAACTATGTGAAGCAAGTGGAAGTTCTCTTGGATATGGATTCAACAGAGCTACGACTATGAGCAAACCCAAATCTCAATCCTCAGATTTCTCAGATGATAACCAAGTCTCTGATGGAACAGTGGCAATATGA 3708 0.4299 MHIQFSAQKLHIHFKFPGCSLPPSKMVVDRFDSCIAFGGKGFGCAFLGNSRTILKARFSGMNKIGIAAACSSSSSWRSNNSRLACVGEFNFSNVKRIGKLCGNSSNFRVVGGRGFLSRCQGDDDSLAYINGNGRNIDNAGGGPNKVGSDLGSISGAASSEPLEVERTIGGEIKQEVQTVDELKELLQKALKELEVARHNSAMYEERVKKISESAISFQDEASRAWNDVNSTLDIIQEIVGEEFVAKEAVQKATMALSFAEARLQVAMESLEVVKGTYDPRSQGAKESNGDEDILEEEQLLVVAQEDIKECQSNLANCETELRCLQKRKEDLQNEVNKLHEIAEKAQMNAVKAEEDVTNIMLLAEQAVADELKAAQVVNDAEIALSKADKSASSVIADSGITLQEQEVLDDPKEEVVQNVSGDDTVDTDTDSQIDNETLLGKQSSDKFSDKTSQVIEDTAQSDYLSDHENGQLVLDPSKEAEVEVEKIMNSVQMKKQETQKDIRDNPPLVPKALLNKSSRFFPASFFSFTIEGDDYTPESFFQSFVESARKLLPKLVIGILLLGGIAFYANRAERSAQLLQQPEVITTTAEEVSTSAKPLVRQLQNLPTRIKNIIASLPDQEVDEEEASLFDMLWLLLASVIFVPVFQKIPGGSPVLGYLAAGILIGPYGLSIIRHVHGTKAIAEFGVVFLLFNIGLELSFERLSSMKKYVFGLGSAQVLVTAVVVGLVAHYVCGQAGPAAIVIGNGLALSSTAVVLQVLQERGESTSRHGRATFSVLLFQDLAVVVLLILIPLISPNSSKGGVGFQAIAEALGLAAVKAAVAITVIIAGGRLLLRPIYRQIAENQNAEIFSANTLFVILGTSLLTARAGLSMALGAFLAGLLLAETEFSLQVESDIAPYRGLLLGLFFMTVGMSIDPKLLVSKFKVIMGTLALLLCGKTLLITVIGRIFGISLINAIRVGLLLAPGGEFAFVAFGEAVNQGIMSSQMSSLLFLLVGISMALTPWLAEGGQLIASRFELHDVRSLLPVESETDDLQDHIIICGFGRVGQIIAQLLSERLIPFVALDVRSDRVAIGRALDLPVYFGDAGSREVLHKVGAERASAAAVTLDSPGANYRTVWALSKHFPKVKTFVRAHDVDHGLNLEKAGATAVVPETLEPSLQLAAAVLAQAKLPTTEIAAIINEFRSRHLAELTELCEASGSSLGYGFNRATTMSKPKSQSSDFSDDNQVSDGTVAI* 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0190 1235 Pfam Sodium/hydrogen exchanger family 634 1005 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo02g0190 1235 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1034 1175 IPR036291 -
Amo02g0190 1235 Coils Coil 172 206 - -
Amo02g0190 1235 TIGRFAM 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 636 916 IPR004771 GO:0006812|GO:0008324|GO:0016021
Amo02g0190 1235 ProSiteProfiles RCK N-terminal domain profile. 1037 1159 IPR003148 GO:0006813
Amo02g0190 1235 Gene3D - 625 1011 IPR038770 -
Amo02g0190 1235 MobiDBLite consensus disorder prediction 1212 1235 - -
Amo02g0190 1235 Coils Coil 477 497 - -
Amo02g0190 1235 MobiDBLite consensus disorder prediction 420 446 - -
Amo02g0190 1235 Coils Coil 293 355 - -
Amo02g0190 1235 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 36 1235 - -
Amo02g0190 1235 PANTHER K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 36 1235 - -
Amo02g0190 1235 Gene3D - 1033 1197 - -
Amo02g0190 1235 Pfam TrkA-N domain 1038 1151 IPR003148 GO:0006813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0190 Amo-Chr2 2111058 2119257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0190 114 1235 Inorganic Solute Cotransporters AT4G00630 68.098 0.0 1372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0190 - - adu:107460050 2218.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3304 14 134398095 134408727 Amo02g0190 02 2111058 2119257 PCT
Amo04g2930 04 104663700 104676462 Amo02g0190 02 2111058 2119257 PCT
Amo02g0190 02 2111058 2119257 Amo14g3304 14 134398095 134408727 PCT
Amo02g0190 02 2111058 2119257 Amo04g2930 04 104663700 104676462 PCT