Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0169 ATGGGGATTCAGTGCTCCAGATTCTTTCCATGTTGTATGAATTCACAAGTTAAGGCATCTGTTCCTGAAACTCCAGATGCCGAAAATGAGGACACAAGTGAGGTCAGTAACTGGCCTATGTTCTGTGAATTTTCTCTAGAGCAACTTAAGAATGCTACCTCTGGTTTTGCTGTTGAGAATATTGTATCCGAACATGGAGAGAAGGCACCAAATGTTGTTTATAAAGGGAAGCTGGAGAATCAAATGAGGATTGCCGTTAAACGATTCAACAGAAATGCTTGGCCTGATTCGCGGCAGTTTTTGGAGGAAGCAAGATCGGTTGGTCAGCTTCGGAACCAGAGACTAGCAAATTTGCTTGGTTGTTGTTGTGAAGGAGATGAAAGGTTGCTTGTGGCTGAATATATGCCCAATGAAACACTTGCAAAGCACCTTTTCCATTGGGAAACACAACCCATGAAATGGGCAATGCGGCTAAGAGTTGTTCTACATCTTGCACAAGCTCTAGAGTACTGTACAAGTAAAGGGCGAGCACTCTATCACGACCTTAATGCATATCGGGTTCTATTTGATGAGGATGGTAATCCTAGGCTTTCGAGTTTCGGCCTCATGAAAAATAGTAGGGATGGGAAAAGTTACAGCACAAATTTGGCATTTACCCCTCCGGAGTATCTCAGAACCGGGAGAGTAACATCGGAAAGTGTGATTTATAGCTTTGGCACTCTTTTGCTGGACCTTCTCAGTGGGAAGCATATCCCCCCAAGTCATGCCCTTGATTTGATTCGGGACAGAAATCTTCAGATGCTAACAGATTCTTGTTTGGAAGGGCAATTTTCTGATGATGATGGGACTGAGTTGGTGCGGTTAGCGTCTCGGTGTTTACAGTACGAACCTCGAGAACGGCCTAATCCGAAATCGTTAGTGGCTGCACTGGCTCCTCTTCAAAAGGAAACAGAGGTTCCTTCAGATGTCTTGATGGGAATTCCACATAGTGCTGCTACTTTTGCTTCATTGTCTCCACTTGGTGAAGCATGTGCAAGAAAGGACTTGACTGCCATACATGAAGTTCTGGAAAAACTTGGCTATAAAGATGATGAAGGAGTGGCAAATGAGTTATCATTCCAGATGTGGACTGATCAAATGCAGGAGACATTGAATTGTAAGAAAAAGGGCGACGTTGCTTTCCGGCAGAAAGATTTTAAACTAGCAATTGAATGCTACACACAGTTCATTGATGCCGGAACGATGGTTTCTCCTACAGTCTATGCACGACGCAGTCTGTGTTATCTTATTAGCGACATGTATCAGGAAGCGCTGAACGATGCAGTGCAAACAAGAGTGATTTCCCCTGTATGGCACATTGCATCTTATCTTGAATCTGTTGCACTTGGAGGACTTGGAATGGAGAATGAAGCACAAGTAGCAATTAAAGAAGCTACAACACTTGAAGCTAAGAGGAGTTCAAATGCTAAACAAAAGTGA 1479 0.4348 MGIQCSRFFPCCMNSQVKASVPETPDAENEDTSEVSNWPMFCEFSLEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAVKRFNRNAWPDSRQFLEEARSVGQLRNQRLANLLGCCCEGDERLLVAEYMPNETLAKHLFHWETQPMKWAMRLRVVLHLAQALEYCTSKGRALYHDLNAYRVLFDEDGNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGRVTSESVIYSFGTLLLDLLSGKHIPPSHALDLIRDRNLQMLTDSCLEGQFSDDDGTELVRLASRCLQYEPRERPNPKSLVAALAPLQKETEVPSDVLMGIPHSAATFASLSPLGEACARKDLTAIHEVLEKLGYKDDEGVANELSFQMWTDQMQETLNCKKKGDVAFRQKDFKLAIECYTQFIDAGTMVSPTVYARRSLCYLISDMYQEALNDAVQTRVISPVWHIASYLESVALGGLGMENEAQVAIKEATTLEAKRSSNAKQK* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0169 492 Gene3D Transferase(Phosphotransferase) domain 1 136 328 - -
Amo02g0169 492 Pfam Protein tyrosine and serine/threonine kinase 72 309 IPR001245 GO:0004672|GO:0006468
Amo02g0169 492 Gene3D Phosphorylase Kinase; domain 1 30 134 - -
Amo02g0169 492 Gene3D Tetratricopeptide repeat domain 380 492 IPR011990 GO:0005515
Amo02g0169 492 SUPERFAMILY TPR-like 384 482 IPR011990 GO:0005515
Amo02g0169 492 PANTHER LRR RECEPTOR-LIKE KINASE 1 491 - -
Amo02g0169 492 ProSiteProfiles Protein kinase domain profile. 59 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0169 492 SUPERFAMILY Protein kinase-like (PK-like) 33 316 IPR011009 -
Amo02g0169 492 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 491 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0169 Amo-Chr2 1955874 1960705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0169 22 329 Glycoside Hydrolase AT3G07070 33.041 9.77e-45 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Amo02g0169 PK_Tyr_Ser-Thr 6.4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0169 K14500 - gmx:100799260 905.59