Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0156 ATGGCTTCTTCTTGGAGTCCAAAGCATGAGAAGATGCAGAAGAGTTTGAGTACACAGTTAGCTGTGGCAGTAAGAAGTGTTCAATGGAGTTATGGAATTTTCTGGGCACCTTCAACAACCCAAGAAGGAGTGCTGGAATGGAGGGAAGGGTACTACAATGGAGACATTAAGACAATGAAGACAGTGCAAACAACAATGGAGATCAAGAATGACAAAATTGGAGTTCAGAGGAGTGAGCAGCTGAAGGAACTGTACAAGTTCCTTCTTGTTGGTGAATCTGATCCACAAACAAAAAGGCCTTCAGCTGCATTGTCTCCTGAGGATCTTTCAGATTCTGAGTGGTATTATTTGGTTTGCATGTCCTTTGTGTTCTATCCTAATCAAAGTTTGCCTGGTAGAGCACTAGAAATCGGCGAAACGATATGGTTATGCAATGCTCAATATGCAGATAGTAAAGTTTTCTCTCGTTCTTTACTTGCAAAGAGTGCATCAATTCAGCAAAAGGAGATACTTTCTGATTATTACATTGTGGCAGTAACAAAGATCTCAATGTTCATACTGTGTTTCAAACCTGTTTTTCAGACTGTAGTGTGCTTTCCCTATCTAGGGGGTGTTATTGAGATTGGTACAACTGAACTGGTGCTAGAGGACCCTAATCTTATTCAACATGTGAAGGCTTGTCTCTTGGAATTCTCAAAGCCTATTTGCTCTGATAAATCTTCATCAGCACTCAATAAGCCTGATGATGACAAACTTCAACCATGCTCCAATGGTGAACATGTTTTGGTTGACACAAAGGTTTTGGAGTACTCATGTTCCCCAGCTGAAGAAATCAAGCTTGATCAAGATCCTATCAAGGAACTACAACAAGATTCCAACATGGATTCTCCTGATGGATGTTCTAATGGTTGCGAGCACAACTGCCGTGTTGGAGAATCGATGGTTGAGGGAATCAATAATGGAGGGCCTTCTTCTCAAGTTCATTTCATGGATGATGATGATGCCTTGAGCAATGGTGCACCTGATTCCCTGAGTTCTTGTGATTGTATATCCGAGGCATCCGAGAACCGGGGAAAGGCTTCAAAGGATGTTCAACTAATCAGGGGAATTCAAAGCTTCAATCATTTGAATAGAAGTTCATTGGATGCAGAAGCAACTGATGAACACTTAAGCTACACAAGAATACTCTCTGCTCTTCTTGGGAGATCGTCGGCTTTCAAGCAGAATCCGTATGCTAGTAACTCAAATTGCAAATCGAGTTTCGTGAAATGGAAGAAAGGAGGAATCTGTGAGCAAAATCGGCTGCGGTTGGAGCAAAGCTTGTTGAAGAAGACTCTGTTTACTGTCCCTCTTATGCATAGGAGTTTCTCATCTATCGAATCAATGAAAGAAAATGAGACAAAAGAATGGACTAATAGATTGGAAAATGCTGATGACAAGTTCAGGGAAAATGTCTTATCTGATAAAATAAGAGAAACTGGAAACTTTAAGATTCTCAAGTCTTCAATTCCTCATCCTATAAGTGAGGTGGAGAAGATTTCGATCCTAGGCGACACAATTAAGTACTTGAAAGAGCTTGAGACAAGAGTGGAAGAACTAGAATCTTACATGGACATGTCGGATTCAGAAGCAAGAACCAAAAGAAAATGTCCAGATATGCTAGAGCAGATATCAGATAACTATGGAGCCAGAAAGGTTTACAATAAGGGAATGAGGAAGCCCTGGATGATGAACAAGAGAAAGGCTTGTGACATTGATGAAAAAGACAGAGAAGAAATAGACAGATTTGTTGTGTCTGAAGAAGATAATAATAAGCCATTGGATGTGAAGGTTAACATGAAGGAGCAAGAGGTTTTGATTGAGATGAAATGTCCTTATAGAGAATATATATTGCATGATATCATGGATGCTATTAACAATCTGCATTTGGATGCTCACTCAGTTGAGTCATCAACAACTGAAGGTGTTCTTACATTGACACTTAAATCCAAGTTTCGAGGCACAGCGACTGCGCCGCTGGGGATGATCAAAGAAGCACTCTGGAAAGTGTCTGGAAATCTATGA 2064 0.4041 MASSWSPKHEKMQKSLSTQLAVAVRSVQWSYGIFWAPSTTQEGVLEWREGYYNGDIKTMKTVQTTMEIKNDKIGVQRSEQLKELYKFLLVGESDPQTKRPSAALSPEDLSDSEWYYLVCMSFVFYPNQSLPGRALEIGETIWLCNAQYADSKVFSRSLLAKSASIQQKEILSDYYIVAVTKISMFILCFKPVFQTVVCFPYLGGVIEIGTTELVLEDPNLIQHVKACLLEFSKPICSDKSSSALNKPDDDKLQPCSNGEHVLVDTKVLEYSCSPAEEIKLDQDPIKELQQDSNMDSPDGCSNGCEHNCRVGESMVEGINNGGPSSQVHFMDDDDALSNGAPDSLSSCDCISEASENRGKASKDVQLIRGIQSFNHLNRSSLDAEATDEHLSYTRILSALLGRSSAFKQNPYASNSNCKSSFVKWKKGGICEQNRLRLEQSLLKKTLFTVPLMHRSFSSIESMKENETKEWTNRLENADDKFRENVLSDKIRETGNFKILKSSIPHPISEVEKISILGDTIKYLKELETRVEELESYMDMSDSEARTKRKCPDMLEQISDNYGARKVYNKGMRKPWMMNKRKACDIDEKDREEIDRFVVSEEDNNKPLDVKVNMKEQEVLIEMKCPYREYILHDIMDAINNLHLDAHSVESSTTEGVLTLTLKSKFRGTATAPLGMIKEALWKVSGNL* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0156 687 PANTHER TRANSCRIPTION FACTOR MYC1 8 685 - -
Amo02g0156 687 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 495 540 IPR036638 GO:0046983
Amo02g0156 687 PANTHER TRANSCRIPTION FACTOR TT8 8 685 - -
Amo02g0156 687 Coils Coil 523 543 - -
Amo02g0156 687 Gene3D - 488 557 IPR036638 GO:0046983
Amo02g0156 687 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 16 227 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0156 Amo-Chr2 1890037 1893819 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0156 15 684 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 37.681 2.00e-121 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0156 - - adu:107472380 1277.31