Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0147 ATGGCAAAGAAGTCTCAGAGGCGCTCCATCCGGTATGAGAAAGACAAGTCAGGGTGTATGTGGGGCTTTATTAGTATGTTTGATTTCCGCCATGGTCACTCAACTCGCAAGTTGATTGCAGATAGAAGGCGAAGCAGCAAGCATGTTGTTGGAGATGTGCCTTCTAAGAACAAGTTTGAGATGTTGAGCGATTTGGATGAAGTTTCTCATGGCAATTTTGACACTGGAGAGAGTAAGAGGCCAACAGTGAAAACTGGTGCTATTAAGCATAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCATTGATCAAACCACAGAGAAGGATGTATATAATGCCAAAGTAGAACCAAATGGATCCAGGTTAAGATGTGAAGTTCCGCAGCAGACGGATTACAAAAGGAAAAAGAAATCTAGCAGTAAAAGCTGTGATATGGACATTGATAATCTGAATTTGGATGCAACCATGAAATCCAAGTACTTGCATAATCAACACTCTCGGCGGCAATCAAAAGATGATCTTGATCTGGATAACATAATTGAAGAGTTTTGTCACTTTAAAGAGTCTTGTTCTGTGAAGCATGGCAATGATAGAGGAGTTCATACTCAGTCAAACCAGAAGCATGCAATTTCTGAAAACATTGCAAGAGAGGTAATTCATGAATTTGTGAATCAGATGATACTGAATGGCAAAGATCTGGCAGAAGCTAGAAAATACCTTCATTCCCATGAACTTATGGAAGCACTTCAGTTTATAAGCTCAGACAAGGAATTGTTTCTTGCACTTCTACAAAACCCAAATTCACTTTTGTTGAAATGTATACAAGAGTTTGCGAAATCTCATGGGAGAGATAACAATGAATATAGTTCTGTTACTTGTTCCAACTTCACCGAACAAGATTTTAGAAATGTGGAACCAACAAGGGAGACTGTAAACCACAAGAAGCATAACTTCTTCAGGAAAAAAACAAAGTCTCAGCCGAAAAATCCAACAAATGAGAATGGCAAAACTGAGACTTCAAATAGAATTGTAATTCTGAAGCCTGGATCAATGGGGTTGCAAAGTTCTGAAACCAGAAACAACATTGCCTCATCCCTGCAATCTCATGATACTGCCAAACACAGTAGTCCTTCTGCAAGAGGTAGTTCACATTTTTCGCTTACAGATTTAAAAAACAAGTTGAAGCATGCAATGGGAAGAGAGAAACATGCAAATCCTGAAGGCATCTCAAAAAGATACCCTGCTGAATGTCAAAGGCCTAGCAACAAAGCCATTCTTAAAGACAATGTTGGAATGAGATCTCCTAACAAAGATCATTTCTTCCTTGAGAAAATTGCAAGGCCTACTAAACTGAAAGATCCGGAATTGATTGTCGAGCAAGAAACTGGTAGTTATAAAAAGAAAAGGGCCTCTCACTTATACACTGAGGCCAAGAAGCATCTGTCTGAGGTGATAGGTAGGAGTGATGAGAACATGGACATGTCGAGTAGGCAGATTTCCAAGACCCTTGGGAGAATTCTATCCCTTCCGGAGTACAACTTTTCGCCCCTTGGCAGTCCTTCAAGGCGTTGGGAGCATCATTTTTTGACTGAACAGACAAGATTTTCTACCTCGGATAAAACTTGGGAGGCTTATGACAATATGTCCCCCAAACAGGCAACCTTTGTGAATAATTTAGCTCAGGAAACTGATAATCCAGAGAAGCAGTCAAGTATACGTGACAGAAGCTCTAATAATTTAGTACGAGAAATTAAGTTGGAATCAAATTTTCCTGATGAACTTAGTCATGTTGATAAAGCAGAAGGCTATTGTGCTGTTAAAGACGAGATAGTTGTCGAAGGTGATGTAGAATCTGAAAAAGAGATCAATATCTTGGAATCTTTCTCAGAACCAATTCACCTCAGCATTAGAAATGATGAACAGAGTTGTGATATCTTAGAAATTACTGAGGACGGTATAGGCGAAAACCAACAATCTACCCCACCATCATCATCTCAGTCCTCATTCACAAAGAAAACTGAAGAGCTAGAAAGTGGTGCAGAAATGTGTGGGAGGCCAAGTCCTGTATCTGTTTTTGATACACCATTCATAGAGGATGAAATCAGCCCCAGTTACTCCGAATATCAACCTATTCAAGTAGCAGTACGGCCGCTAAATATTGAATTCGAAGAACAAGACTATTCACCTGTGAACCAAATCCAGAAAGGAAAATATTGCCTTGAAGAAAATGAATTGATATACAAGTACATCAAATCAGTCCTGCAAGCCTCTGAATTGACTATGGATCAATTATTGATGAAATGCCATTCCTCGGATAAGATACTAGATCCTTCATTGTTTGATCAGGAAGAGCTTCCAGCAAACCAGCTTTGCCATGATCAGAAGCTTCTTTATGACTGTATCAATGAAGTTCTGATGGAGGTTTGTTGGCATTACTTTGCTGTCTCACCTTTTGTATCCTTTGTGAAGAATCTTAGCATAAGGCCAAGTCCAAATATGAAAGTGGTTATTGTCAAGGTTTGGGAAGCAATGTGCTGGCATTTCCTTCCCTTACCCCCGCCTCGAACTTTGGACAAAATTGTCAGGAAAGACATGGAAAAAAGTAGCATGTGGATGGATCTTCGGTTTGATGCTGAAGCCGTTGGTTTCGAAATGGGTGAGATCATTCTTGCAGAACTCATGGAGGATACAATATTGAGTTGTACATATCTGGACTGA 2718 0.3974 MAKKSQRRSIRYEKDKSGCMWGFISMFDFRHGHSTRKLIADRRRSSKHVVGDVPSKNKFEMLSDLDEVSHGNFDTGESKRPTVKTGAIKHSVKKLIEEEMFIDQTTEKDVYNAKVEPNGSRLRCEVPQQTDYKRKKKSSSKSCDMDIDNLNLDATMKSKYLHNQHSRRQSKDDLDLDNIIEEFCHFKESCSVKHGNDRGVHTQSNQKHAISENIAREVIHEFVNQMILNGKDLAEARKYLHSHELMEALQFISSDKELFLALLQNPNSLLLKCIQEFAKSHGRDNNEYSSVTCSNFTEQDFRNVEPTRETVNHKKHNFFRKKTKSQPKNPTNENGKTETSNRIVILKPGSMGLQSSETRNNIASSLQSHDTAKHSSPSARGSSHFSLTDLKNKLKHAMGREKHANPEGISKRYPAECQRPSNKAILKDNVGMRSPNKDHFFLEKIARPTKLKDPELIVEQETGSYKKKRASHLYTEAKKHLSEVIGRSDENMDMSSRQISKTLGRILSLPEYNFSPLGSPSRRWEHHFLTEQTRFSTSDKTWEAYDNMSPKQATFVNNLAQETDNPEKQSSIRDRSSNNLVREIKLESNFPDELSHVDKAEGYCAVKDEIVVEGDVESEKEINILESFSEPIHLSIRNDEQSCDILEITEDGIGENQQSTPPSSSQSSFTKKTEELESGAEMCGRPSPVSVFDTPFIEDEISPSYSEYQPIQVAVRPLNIEFEEQDYSPVNQIQKGKYCLEENELIYKYIKSVLQASELTMDQLLMKCHSSDKILDPSLFDQEELPANQLCHDQKLLYDCINEVLMEVCWHYFAVSPFVSFVKNLSIRPSPNMKVVIVKVWEAMCWHFLPLPPPRTLDKIVRKDMEKSSMWMDLRFDAEAVGFEMGEIILAELMEDTILSCTYLD* 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0147 905 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 901 - -
Amo02g0147 905 Pfam Protein of unknown function (DUF3741) 224 268 IPR022212 -
Amo02g0147 905 MobiDBLite consensus disorder prediction 653 684 - -
Amo02g0147 905 MobiDBLite consensus disorder prediction 324 341 - -
Amo02g0147 905 MobiDBLite consensus disorder prediction 653 673 - -
Amo02g0147 905 PANTHER (, RELATED) 1 901 - -
Amo02g0147 905 MobiDBLite consensus disorder prediction 366 385 - -
Amo02g0147 905 MobiDBLite consensus disorder prediction 310 341 - -
Amo02g0147 905 Pfam Domain of unknown function (DUF4378) 748 896 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0147 Amo-Chr2 1811337 1816871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0147 1 884 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.666 2.63e-108 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0147 - - gmx:100780609 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo04g2822 04 102805593 102809624 Amo02g0147 02 1811337 1816871 PCT
Amo02g0147 02 1811337 1816871 Amo04g2822 04 102805593 102809624 PCT