Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0145 ATGGCTGTGGTGAGTCCTATGAGTCCTGCTATGGCTACAACTCCACACCAGGTCTATCCCACGACGCCTCTTCGTGGAAGCGAGGTTCCATGGATCATGAGTGGCATGAGAGAAGCTGCAGAGGCATCTAGTCCAAATGTGGTTGATGACATTATCCATGTTGCTGTGGCAAAAGATGTGAAAGATAGCAGGTTGAATCTGATTTGGGCAATACAAAATTCTGGAGGAAAGAGGATTTGCATCCTTTATGTTCATGTGCCAGCAGCTACAATCCCCATAATGGGTGCTAATTTTCCAGAAAGTGCAGCCGGAGAGCATCGAGTTCAAGAACATCGAGAAAATGAAGAGCAAGGCATGCGTAATATTCTGAATGACTATCTTCTTATCTGCCAAAAAATGGGGGTTAAGGCAAACAAACTGCATATTATTGACAAGGATTGCATTGAGAAAGGGATTGTAGAACTTATCTGCAAGCATAATATCAAGAAGCTTGTGATGGGAGCAGCTTCTGATAAGTACTATTCTAGGAGAATGACAGATCTCAGGTCTAGGAAAGCCATTTATGTGAGAGAAAATGCTCCTGCTTATTGTCATATACAGTTCATCTGCAAAGGATACCTTATACACACAAGGAATCTCAGTTTGGATGGAGGTAATGTAGAGGTCAGGTCTCCTTTGTCACCTCAAACGCCTAGCCGTTCGCCTTCACTTGGACAACAATTATATCGCCGAGTAAGATCTGTTAACGAAAGAAATGGAGGGAAAATGTCACTTGCTTCTCCAATCAGGTTTCTCATGCAACCAAACAGGTTTGGTAGAGAAGGAACTTCTAATGGCTCAGATGTACTGTCTAGGCCAGCAAGTCCTTTGGTTTCATCAACAAGTTCTGTTAATTTCATTAGTGAGCTAAGTGAGAATGCATCAGCCTTGAATTCGAGTAGTCCTAAAGCGATTCAAGCATCTTCTAGCAGGCTGCAGGATAGTGAAATGGATGAGACTCTCTATGATCAACTCCAACAGGCCATGGCTGAAGCTGAGAATGCAAGGCAGGATGCTTATCAAGAGAGTATTAGGCGTGGGAATGCTGAAAGGAATGCCATTGAAGCGATTCGCAGGGCTAAAGCAGCTGAAATGAAGTATGAAGAGGAGGTGAAATTGAGGAAAGAATTAGAGGAAGCAATAAAAAGAGAAAAGGAAGAAATAGATTGCATGAAAAGCCAAAGAGAGAAGCTTAATGAAGAACTCCAGCATGCCTTGCACAAGAATTCATTGCTAGAAAGTAAAATGGCATCAACTCAACTTATGCTAGAGGAGTTAGATCAGAAGAACAAATCTGCTATGGACACATTAGAAAAGTACAAGCAAGAGCGCGAGGATTTGCAAACGCAGCGCGATAATGCCTTAAAAGAAGCTGAGGACTTGAGGAGAGAAAAACAAGAAGAGGCCTCAACCTCACATGTATTTCAACTCTTCTCAGAATTTTCTTTTGCTGAGATTAAAGAAGCTACCAATAACTTCAGTCCATCCCAAAAGATTGGAGAAGGCGGATATGGAAGTATATATAAAGGTATCCTTCGCCAAACCGAGGTAGCTGTGAAAATGTTGAGCCCAGACAGCAAGCAAGGACCTAAAGAGTATCAACAGGAGGTTGAGGTACTAAGCAAGTTAAGGCATTCCAATCTGATCACACTAATAGGAACCTGCCCAGAATCTTGGACTCTTGTCTATGAGTATTTATCCAATGGAAGCCTAGAAGATCGTCTCAGCTGCGAAGATAACACGCCTCCATTATCATGGCAAACTAGAACTCGCATTGCTGCAGAAGTGTGCTCTACTCTAGTGTGTCTCCATTCTAATAAACCTCACAGCATAGTTCATGGTGATTTAAAACCAGCCAACATTCTCCTTGATGCTAACCTTGTTAGCAAGCTAAGTGACTTTGGAATCTCAAGATTACTATCGTGTCGCGAGGATTCTACAACACAGTTCTGGATAACTGATCCAAAGGGAACTTTTGCATATATGGACCCTGAATTCTTCGCTTCAGGGGAACTTACACCAAAGTCTGATGTTTATTCTTTTGGAATCATATTACTAAAACTATTGACTGGTAGACCAGCTGTGGGAATAGCAAAGGTAGTTGAATCTGCTTTAGTTGCTGGAAAGTTGAATTCTCTCTTGGATCCCTTGGCCGGAGACTGGCCATTAGTACTGGCTGAAAAGCTTGCTCGCTTGGCTTTGAGGTGTTGCGAAATGGAGCGAAAGAACCGGCCGGATCTTCATCTGGAAGTATGGAGAATACTTGAACCTATGAAGGCTTCTTTGAGTGGAGAAAACACATTAGGACTTGGTTCTCAAGAGCTTTGCCAACCCCCTCCTTATTTCATTTGTCCAATTTTCAAGGAAGTCATGAGAGATCCTCACATGGCAGCAGATGGTCATACTTATGAAGCCGAGGCCATACGAGGATGGCTGGACAGCGGCCGCGACACTTCGCCGGTGACAAATTCTAAGCTTGTAATGCACAATCTTGTTCCTAACCATGCTCTCCGCCATGCAATTCAAGACTGGCTTGAAAGCTGA 2583 0.4309 MAVVSPMSPAMATTPHQVYPTTPLRGSEVPWIMSGMREAAEASSPNVVDDIIHVAVAKDVKDSRLNLIWAIQNSGGKRICILYVHVPAATIPIMGANFPESAAGEHRVQEHRENEEQGMRNILNDYLLICQKMGVKANKLHIIDKDCIEKGIVELICKHNIKKLVMGAASDKYYSRRMTDLRSRKAIYVRENAPAYCHIQFICKGYLIHTRNLSLDGGNVEVRSPLSPQTPSRSPSLGQQLYRRVRSVNERNGGKMSLASPIRFLMQPNRFGREGTSNGSDVLSRPASPLVSSTSSVNFISELSENASALNSSSPKAIQASSSRLQDSEMDETLYDQLQQAMAEAENARQDAYQESIRRGNAERNAIEAIRRAKAAEMKYEEEVKLRKELEEAIKREKEEIDCMKSQREKLNEELQHALHKNSLLESKMASTQLMLEELDQKNKSAMDTLEKYKQEREDLQTQRDNALKEAEDLRREKQEEASTSHVFQLFSEFSFAEIKEATNNFSPSQKIGEGGYGSIYKGILRQTEVAVKMLSPDSKQGPKEYQQEVEVLSKLRHSNLITLIGTCPESWTLVYEYLSNGSLEDRLSCEDNTPPLSWQTRTRIAAEVCSTLVCLHSNKPHSIVHGDLKPANILLDANLVSKLSDFGISRLLSCREDSTTQFWITDPKGTFAYMDPEFFASGELTPKSDVYSFGIILLKLLTGRPAVGIAKVVESALVAGKLNSLLDPLAGDWPLVLAEKLARLALRCCEMERKNRPDLHLEVWRILEPMKASLSGENTLGLGSQELCQPPPYFICPIFKEVMRDPHMAADGHTYEAEAIRGWLDSGRDTSPVTNSKLVMHNLVPNHALRHAIQDWLES* 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0145 860 SUPERFAMILY RING/U-box 786 859 - -
Amo02g0145 860 Coils Coil 373 484 - -
Amo02g0145 860 SUPERFAMILY Protein kinase-like (PK-like) 483 760 IPR011009 -
Amo02g0145 860 Gene3D Phosphorylase Kinase; domain 1 474 578 - -
Amo02g0145 860 PANTHER OS02G0152300 PROTEIN 39 859 - -
Amo02g0145 860 SMART Ubox_2 794 857 IPR003613 GO:0004842|GO:0016567
Amo02g0145 860 ProSiteProfiles U-box domain profile. 790 860 IPR003613 GO:0004842|GO:0016567
Amo02g0145 860 MobiDBLite consensus disorder prediction 308 328 - -
Amo02g0145 860 Pfam U-box domain 792 859 IPR003613 GO:0004842|GO:0016567
Amo02g0145 860 MobiDBLite consensus disorder prediction 271 290 - -
Amo02g0145 860 Gene3D Transferase(Phosphotransferase) domain 1 579 780 - -
Amo02g0145 860 CDD STK_N 51 205 - -
Amo02g0145 860 Coils Coil 328 355 - -
Amo02g0145 860 PANTHER U-BOX KINASE FAMILY PROTEIN 39 859 - -
Amo02g0145 860 CDD RING-Ubox_WDSUB1_like 795 836 - -
Amo02g0145 860 MobiDBLite consensus disorder prediction 456 480 - -
Amo02g0145 860 MobiDBLite consensus disorder prediction 269 290 - -
Amo02g0145 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Amo02g0145 860 ProSitePatterns Protein kinases ATP-binding region signature. 512 533 IPR017441 GO:0005524
Amo02g0145 860 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 790 860 IPR013083 -
Amo02g0145 860 Pfam Protein kinase domain 508 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0145 860 SMART serkin_6 506 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0145 860 ProSiteProfiles Protein kinase domain profile. 506 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0145 Amo-Chr2 1779674 1784627 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0145 47 859 U-box Gene Family AT2G45910 54.110 0.0 846
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Amo02g0145 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0145 - - adu:107472426 1639.78