Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0128 ATGTTTTCTTACAAGGAGCTTCAATTGGCAACAAGGGGTTTTTCGGAGAAAGTTGGGCATGGTGGATTTGGGACTGTATTTCAAGGTGAATTGAGTGATTCAACTCTTGTTGCTGTGAAGAGGTTGGAGAGGCCAGGGAGTGGGGAGAAAGAGTTCAGGGCCGAGGTTTCGACAATTGGGAACATTCAGCATGTTAATCTTGTGAGGCTTAGAGGTTTTTGTTCTGAGAATTCACATAGGCTTTTGGTTTATGAGTTCATGCAAAACGGTGCATTGAGCGGTTATCTGCGCAGGGAAGGGCCTAGTTTGAGCTGGGATGTTAGGTTTCGAGTTGCAGTTGGAACAGCCAAAGGGATTGCATATTTACATGAGGAGTGTAGGAACTGCATTATACATTGTGATATCAAACCTGAGAATATCCTTTTGGATAGTGGTTTCAATGCAAAGGTTTCGGATTTCGGTTTGGCAAAGCTCATGGGGAGGGATTTCAGTAGGGTGCTGGCAACCATGAGGGGTACTTGGGGGTATGTTGCTCCGGAGTGGATTTCCGGGGTGGCAATTACTGCCAAGGCTGATGTTTATAGTTATGGAATGACATTGCTTGAACTAATTGGTGGTCGCCGAAACATTGAGACACTGCCATCTGCTGGTGGTTGTGACAGAGGCAAAGAGAGTGGTTGTGAGATGGGAGAGAGATGGTTCTTTCCTCCTTGGGCGGCACGGCAGATAATTGACGGCAATGTGGCTTCCGTGATCGATAAGAAACTTGGAGATGTATATAACATTGAGGAGGCTAGAAGGGTTAGTTTGGTAGCAGTTTGGTGCATTCAAGATGATGAAGCTATTAGGCCTACAATGGATATGGTGGTGAAAATGTTGGAAGGGTTAGTGGAAATTAGGGATCCTCCATTGCCGAATTTGCTACAAGCATTGGTTACCGGCGAGTCCTTTCAAGGCGTCAAGTCTGATTCCGGCAATGAGATTTCCACCGGCGGAGGCTTATCCGGCGGCAACTTGGAAGTGTCAATTGCTGATTCAGAATCATATGTTGGAGATGCATTTCCCTCCCCAATGGATGTGAATGTCAATGTTGATTTACTTCCTAAGGAGATGAATTGGAAGAAGAAAGTTGAAAAAGAAAATGGGATGTGGATGTTGGTTTCCTTTGATGTTGCAAGTTTAGATTCTTGTGTTTCATATGTTCTGTCTTAA 1212 0.448 MFSYKELQLATRGFSEKVGHGGFGTVFQGELSDSTLVAVKRLERPGSGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEFMQNGALSGYLRREGPSLSWDVRFRVAVGTAKGIAYLHEECRNCIIHCDIKPENILLDSGFNAKVSDFGLAKLMGRDFSRVLATMRGTWGYVAPEWISGVAITAKADVYSYGMTLLELIGGRRNIETLPSAGGCDRGKESGCEMGERWFFPPWAARQIIDGNVASVIDKKLGDVYNIEEARRVSLVAVWCIQDDEAIRPTMDMVVKMLEGLVEIRDPPLPNLLQALVTGESFQGVKSDSGNEISTGGGLSGGNLEVSIADSESYVGDAFPSPMDVNVNVDLLPKEMNWKKKVEKENGMWMLVSFDVASLDSCVSYVLS* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0128 403 ProSitePatterns Protein kinases ATP-binding region signature. 18 40 IPR017441 GO:0005524
Amo02g0128 403 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 1 352 - -
Amo02g0128 403 SUPERFAMILY Protein kinase-like (PK-like) 2 294 IPR011009 -
Amo02g0128 403 Gene3D Phosphorylase Kinase; domain 1 1 86 - -
Amo02g0128 403 ProSiteProfiles Protein kinase domain profile. 12 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0128 403 Pfam Protein kinase domain 15 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0128 403 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Amo02g0128 403 SMART serkin_6 12 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0128 403 Gene3D Transferase(Phosphotransferase) domain 1 87 301 - -
Amo02g0128 403 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0128 Amo-Chr2 1437725 1439624 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0128 2 303 Receptor kinase-like Gene Family AT5G20050 44.127 1.55e-81 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Amo02g0128 Pkinase 2.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0128 - K03327 gmx:100778917 622.468