Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0118 ATGGCTGGTGCACTTGTTGGTGGAGCTTTCCTTTCTGGCTTCATTAACGTTGTCTTTGACAGGTTGCTCACAACGGATACGGTCAACCGGGTCTTGGGCAAGAAACTTGGCCCTGCCTTGGTTGAGAGGCTGAAAATTTCTCTGTATGCTGCTGAAGCTGTGCTTGATGATGCTGAGTACAAGCAACTGGGCAACGAACCTGTGAGGGATTGGCTCAACCGTCTGAGAGATGCTGTTTATGATGCTGATGACTTTCTGGATGCTGTACTCACCAAAGCCGCCACTCAAAAGGAGGTACGTTCTGTCTTGCCTAGTTTCTTCCTCAACCGACATAGGAAGATGGTAGATAACATGGAAGGGGTGGTTTCAAGAATAGAATTTCTTGTAAGTCAAAAAGATATCCTTGGTCTTCAAAAGAGTACCAAGGATAATAACTTGTCATCATCATCATCATCGTCATCATGGCGAGAAACCACATGTCTGATGGAAGGGAACATATATGGCAGGGAGGATGATCAACAAGCTCTAATCGAAACAATAAATGACAACAGTGAATCTCAGTTATCTGTGATTCCTATTGTTGGCATGAGTGGGGTTGGTAAAACAACCTTAGCCAGATGGGCGTACAGTGTCGCGGAAGGGTTTGATCCGAAAGCATGGGTCTGCATCTCTGAAACATTTGATGTTGCTGATATTACAAAGAAAACAATTGAGGAAATTACAAAAACTACTTGTAGCCTTGGGAGTTTAAATTTGCTTCAAAATGAATTGCAGAAAATCTTGTCGGGAAAGAAGTTCTTTATTGTTCTAGACGATGTWTGGAGCGATGATGCCGATAAGTGGAAGCAATTTMTAACTCCTTTTCACTKTGGRGCTAAWRGTAGTACAATTCTTCTSACAACTCGCAATCAAGAGGTTGCTTCAGTAGTTCAAACATGTCCCTCTTGCMCTCTTAATGAGTTGTCWGAAGAGTCTTGTTGGTTATTGTTTGCAGCCAATGCATGTTTTCCRGAGTYAAAYGGGAACCCAACACTAGAGGATGTGGGTAGAAAGATTGTWAAGAGGTGTAAGGGGTTGCCATTAGCTGTAGAAACAWTTGGGCRTTTWTTGCGAWGAAAGGATGATGTTAAAGAATGGAATGTTGTTTTAATGAATGAMATTTGGGAATTGAAAAATAGTAAAATTATTCCAGCATTACATTACCAGAGTCATTATGCAACTTGTTTAATCTACAAACATTGA 1242 0.4074 MAGALVGGAFLSGFINVVFDRLLTTDTVNRVLGKKLGPALVERLKISLYAAEAVLDDAEYKQLGNEPVRDWLNRLRDAVYDADDFLDAVLTKAATQKEVRSVLPSFFLNRHRKMVDNMEGVVSRIEFLVSQKDILGLQKSTKDNNLSSSSSSSSWRETTCLMEGNIYGREDDQQALIETINDNSESQLSVIPIVGMSGVGKTTLARWAYSVAEGFDPKAWVCISETFDVADITKKTIEEITKTTCSLGSLNLLQNELQKILSGKKFFIVLDDVWSDDADKWKQFXTPFHXGAXXSTILLTTRNQEVASVVQTCPSCXLNELSEESCWLLFAANACFPEXNGNPTLEDVGRKIVKRCKGLPLAVETXGXXLRXKDDVKEWNVVLMNXIWELKNSKIIPALHYQSHYATCLIYKH* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0118 413 Pfam Rx N-terminal domain 39 104 IPR041118 -
Amo02g0118 413 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 401 IPR027417 -
Amo02g0118 413 Gene3D - 22 133 - -
Amo02g0118 413 PANTHER OS05G0414200 PROTEIN 38 406 - -
Amo02g0118 413 Gene3D - 145 315 IPR027417 -
Amo02g0118 413 Gene3D - 320 405 IPR042197 -
Amo02g0118 413 PRINTS Disease resistance protein signature 190 205 - -
Amo02g0118 413 PRINTS Disease resistance protein signature 260 274 - -
Amo02g0118 413 PRINTS Disease resistance protein signature 356 370 - -
Amo02g0118 413 PANTHER DISEASE RESISTANCE PROTEIN RP 38 406 IPR044974 GO:0006952
Amo02g0118 413 Pfam NB-ARC domain 170 384 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0118 Amo-Chr2 1378536 1380363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0118 177 384 WRKY Transcription Factor Family AT5G45050 24.299 1.89e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0118 - - ahf:112730679 714.916