Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0117 ATGGAAARGGTGGTTACAAAGATAGAATTTCTTGAACAACAAAAAGATTTCCTTGGTCTTCAAAAGACTACCAATATCTTGTCATCATCATGGAGAGAATCCACATCTCTGGTGGAAGGGAATATATATGGWAGGGAGGATGATCAACAAGCCTTACTCAAAGTAATAAATGACAGCAGTGAAAGTGAGTTATCTGTGATCCCTATTGTTGGYATGGGTGGGGTTGGTAAAACAACTTTAGCAAAATGGGTGTACAATACCACAGAGGGATTTGATTTCAAAGCATGGGTTTGCATCTCTGAAACATTTGATGTTGTTGAGATTAYAAGGAAAACCATTGAGGAAATTACTAAAACTACTTGTTCCCTTGGGAGTTTGAATTTGCTTCAGAATAAATTGCTAGAGATCTTGTCGGGGAAGAAGTTCTTTGTTGTTCTAGACGATATCTGGAGCGATGATGCTGATAACTGGAAGAAGTTTACGACTCCTTTTCACTGTGGGGGTAAGGGTAGTACGATTCTTCTAACAACTCGCATTAAAGAGGTTGCTTCAGTTGTTCAGACATGTTCCTCTTACTTTCTTAATGAGTTGTCCCAAGATTCTTGTTGGTTACTCTTTGCAGAGAATGCATGTTTTCCGGAGTCAAATGGGAACCCAACACTGGAGGATATCGGTAGAAAGATTGTCAACAAGTGTAAGGGCTTGCCATTAGCTGTAGAAACACTTGGGCGGTTGTTGCAAGGAAAGGATGATGCTAAAGAATGGAATGCTGTTTTAAGCAGTGACATCTGGGAATTTCCTATGAAAAATAAATGGAATGTTGTTTTAATGAATGACATTTGGGAACTGAAAAATAGTAAAATTATTCCAGCATTGTTAATAAGCTACTTCCAGCTACCTCCTTACTTGAAGCGCTCTTTCGTTTATTGTTCATTGTTTCCCAAAGATCATAAGTTTGAGAAAGACGAACTAATTTTGCTGTGGATGGCTGAAGATCTTTTAAGGCTACCAAAGAGAGGAGAGAGTTTAGAAGAGGTTGGTTCTCAGTGTTTCGAAGAATTAGCTTCGAGGTTATTTTTTAAACCAGCGGAGTATCCTCGTGACAGGTACGTGATGCATGATCTTTTACATGACTTGGCAATATTCCTTGCTGGAGACTTCTATTGTAGAATAGAAGAGCGTAGTGAACAAGAAAAGAAGAAGGTTCTCACTCGCCATTTGTCATATTTGTCATCTTTGTCACATTTGTCATATGGAAGGTTAGATCATCCAATCTCAAAAGTCTTGTCCATTGTGAAATCAGAATCTTTGAGGACGTCTTTGTATATCGATGATTTGTTAAGCATGAAAAGCAGAGCATCAAAGTTGAAATACTTGAGAGTTTTATCCTTTCGTAAACTTAATGTATTACCAGATTCAATAGGTAAATTGATTCATCTACGCTATTTGAATCTCTCTTGGACCAAGGTTAAGACATTACCAGAGTCATTATGCAACTTGTTTAATCTACAAACATTGATATTGTATCAATGTTCTTACCTGACAATGTTGCCCAATGGCATGCATAAACTTGTGAATTTACGGCATCTTGATCTTAGGGGAACTTATTTGAAAGAAATGCCTAGAGGAATAAGTAAATTGAAACACATGCCTATTTTAGAATACTTTGCGGTAGGCAAGCACGAAGACAATGGAATACAGGAATTAGGAGGTCTCCCAAATCTTGAAGGATCAATTGCGATTAAGAAGTTGGAGAATGTTGTTAATGTGAGACAAGCAAGGAGTGCAAGGATGTTGGAGAAGAACCACATTGACAATTTATCGTTGGAATGGTCTTCAGGTAATAAGATGGTTTCAAACACAGAGACATTGAGAGATATACTCCACTGCTTGCAGCCGCACAATGGCTTGAACATGTTGAGAATATCGGGATACAAGGGCGAAAGATTTCCAGATTGGGTGGGGCACTGTTCTTACAACAATATAACATGGGTAACACTAGCATCTTGCAAGAATTGCTGCATGCTGCCTTCACTTGGACAACTGCCATCTCTTGGGTACCTGCGCATTGAAGGTTTTGATCAGCTCAAGCGTATTGGTGATGAGTTTTACAAGAGTGACGGCGATCATCATTCCTCGCCTATTGCACCGTTTCCTTCACTCGAGGAATTGGTGTTTGATAACATGCCATGCTGGGAGAAGTGGCACGTACCTGACCCAGAAGCTTTTCCTCAGCTTAAGAAACTTCAAATAGAAAGTTGTCCAATGTTAAACGGAGATATGCTTAACAGCATATTCTGGAGAAGGGATTCTTCCTTGCGGGAAGATGAAGAAGGAAAGTCTGATGAGATGGTAGGTGGTGGGGATGCTTTATCAATAAGGCCATCTCAATCATTTAATGCAAGGAGCATCGACTATCTATGTATTTCAGGGTGTCCGTCTATTGTATCCTTGTCGTTGGATGTCTTTCCCAATCTCAAGAATTTGGAGATAAAAGGGTGTAGGAATCTGGAATCAGTGTCAGAGGCACCACACGCTGCTCTTCAACGTCTCTCCATTACTTCCTGCCAGAAATTAGTGTCATTTGCAGGAGGAGTGGCTGCACCCAACTTGACTCATCTCAGCCTCACACAATGCTACAATTTGAAGGCATTACCACGTGACATGAAGAGTCTACTCCCAAGTTTACACTCTCTCGAGATATATGGTAGCCCAAACATTTGCAGGTTGCCAGAGGGTGGTTTGCCGCCTAACTTGAAATCACTTAAAGTGGGATATTGCGAGCAACAAGTGAGGAATCTATCATGGATGCGCAACTTCCACACCCTCACTCGTCTTACCATTGATGGTAATTGCTGCCACAACATAAAGTCATACCCAGAGGTAGGTTCGCTGCCTCAGCTTCCCTCCCTTACCACTCTTGAGATAACAAACTTCGATGATCTGGAAACATTTGAGTGCAACGAGCTTCTCCACCTCACCTCCCTTCAACAACTATACATTTCATTCTGCTACAATCTGAAGAATATGGAAGGAGAAAAGCTGCCTCCCTCTCTCTTGCGACTTCAAGTTGATTTTTGTGGTTTGCTGGGAGGATTATGCAAGAACAAGCATCAACTAATCTGGCCCAAAATTTCCCACATCCCCAACATTCAAGTCGATTGGAAACAAATTTTCTAA 3180 0.4053 MEXVVTKIEFLEQQKDFLGLQKTTNILSSSWRESTSLVEGNIYGREDDQQALLKVINDSSESELSVIPIVGMGGVGKTTLAKWVYNTTEGFDFKAWVCISETFDVVEIXRKTIEEITKTTCSLGSLNLLQNKLLEILSGKKFFVVLDDIWSDDADNWKKFTTPFHCGGKGSTILLTTRIKEVASVVQTCSSYFLNELSQDSCWLLFAENACFPESNGNPTLEDIGRKIVNKCKGLPLAVETLGRLLQGKDDAKEWNAVLSSDIWEFPMKNKWNVVLMNDIWELKNSKIIPALLISYFQLPPYLKRSFVYCSLFPKDHKFEKDELILLWMAEDLLRLPKRGESLEEVGSQCFEELASRLFFKPAEYPRDRYVMHDLLHDLAIFLAGDFYCRIEERSEQEKKKVLTRHLSYLSSLSHLSYGRLDHPISKVLSIVKSESLRTSLYIDDLLSMKSRASKLKYLRVLSFRKLNVLPDSIGKLIHLRYLNLSWTKVKTLPESLCNLFNLQTLILYQCSYLTMLPNGMHKLVNLRHLDLRGTYLKEMPRGISKLKHMPILEYFAVGKHEDNGIQELGGLPNLEGSIAIKKLENVVNVRQARSARMLEKNHIDNLSLEWSSGNKMVSNTETLRDILHCLQPHNGLNMLRISGYKGERFPDWVGHCSYNNITWVTLASCKNCCMLPSLGQLPSLGYLRIEGFDQLKRIGDEFYKSDGDHHSSPIAPFPSLEELVFDNMPCWEKWHVPDPEAFPQLKKLQIESCPMLNGDMLNSIFWRRDSSLREDEEGKSDEMVGGGDALSIRPSQSFNARSIDYLCISGCPSIVSLSLDVFPNLKNLEIKGCRNLESVSEAPHAALQRLSITSCQKLVSFAGGVAAPNLTHLSLTQCYNLKALPRDMKSLLPSLHSLEIYGSPNICRLPEGGLPPNLKSLKVGYCEQQVRNLSWMRNFHTLTRLTIDGNCCHNIKSYPEVGSLPQLPSLTTLEITNFDDLETFECNELLHLTSLQQLYISFCYNLKNMEGEKLPPSLLRLQVDFCGLLGGLCKNKHQLIWPKISHIPNIQVDWKQIF* 1060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0117 1059 Pfam NB-ARC domain 46 260 IPR002182 GO:0043531
Amo02g0117 1059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 310 IPR027417 -
Amo02g0117 1059 Gene3D Ribonuclease Inhibitor 868 1046 IPR032675 -
Amo02g0117 1059 Gene3D Ribonuclease Inhibitor 788 867 IPR032675 -
Amo02g0117 1059 SUPERFAMILY RNI-like 797 1033 - -
Amo02g0117 1059 PRINTS Disease resistance protein signature 821 837 - -
Amo02g0117 1059 PRINTS Disease resistance protein signature 66 81 - -
Amo02g0117 1059 PRINTS Disease resistance protein signature 232 246 - -
Amo02g0117 1059 PRINTS Disease resistance protein signature 136 150 - -
Amo02g0117 1059 Gene3D - 290 381 IPR036388 -
Amo02g0117 1059 Gene3D - 28 192 IPR027417 -
Amo02g0117 1059 SUPERFAMILY L domain-like 371 764 - -
Amo02g0117 1059 PANTHER DISEASE RESISTANCE PROTEIN RP 2 861 IPR044974 GO:0006952
Amo02g0117 1059 SMART LRR_typ_2 477 500 IPR003591 -
Amo02g0117 1059 SMART LRR_typ_2 524 547 IPR003591 -
Amo02g0117 1059 PANTHER OS05G0414200 PROTEIN 2 861 - -
Amo02g0117 1059 Gene3D Ribonuclease Inhibitor 432 767 IPR032675 -
Amo02g0117 1059 Gene3D - 196 288 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0117 Amo-Chr2 1346424 1370184 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0117 63 254 WRKY Transcription Factor Family AT5G45050 26.633 2.06e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0117 - - ahf:112726314 1563.51