Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0097 ATGAAGCTCTCCTTCTCGATCCCCTCCAAGTCCTCTTCCTCCTCCAATCCCATCAAACTCGATCACTCCTCCAAAAACGACGCCCCACCCTCCAAGCACTTCGTCACCGAATTCGACCCTTCCAAACCGCCAACTGAACAAACCGCCACCGTTATACCCCCGATCCAGAACGAATGGCGCCCCACCAAGAAGATGAAGAACCTCGAGCTTCCCATCACCGACCCCAACGCTGACCATCAATCCCTCGAATTCGAGCACGATTCCAATGCCGCGGATGCAGAACCCGGCACCGACATGTCCTACGGTCTCAACCTGCGCCAAGCCGCCGAGAAAAATGGAAAAACCGGTGAACTCGCTGATGATGAGGATGATAGGGTTCCGCGGCAACGGCCGGAGGTGGCGTTGCTGCAGAAGTTTAAGGACGATTTGAAGCGGCTTCCTGATCACCAGGGTTTCGAGGAGTTTAATGATGTCCCTGTTGAGGGTTTCGGCAAGGCCTTGCTGGCCGGATATGGGTGGTCAGAAGGAATGGGAATAGGGCGGAATGCCAAGGAGGACGTCAAGATTGTGGAGTACAAGAGGAGGACTGCCAAGGAAGGGTTAGGATTTGTTGGCAATGATCGCGGTTCCGTTCAGAGCCAGAAGAAGGAGGAGAAGAAGAAAAGCAGGGAAGACAGTGGGAGAAATGATGCAGATTTTGTTAGTGAGAAGAAGATTGTGAGGATTATTGGGGGGAAAGATGCTGGATTGAAGGGTATCGTTGTGAGGAGAATTGGGGAGGATTGGATTGTTTTGAAGGTTTCAAGGAGTGGGGAGGAAGTGGAGGCTAGAGTGAGTGTGGATGATGTTGCTGAACTGGGATCTGCTGAGGAAGAGAGGTGCTTGAGGAAATTGAAGGAACTGAGGATTCGGCACAAGGGTGAAGATGATTGTAACAGGGACAAGGCGTCAAGGCATAAGCGTGAGAGAGATGAGAAGACAACTCGAGTGAAAGCTAATGGGGGTGATCATAGGAAGGAAGATCAGCAGCGAGGAAAGAAACGGATTTCTTGGCTCACAAGTCACATTCGAGTACGGGTTATTAGCCAGAACATTAAAGGAGGGCGGTTGTATTTGAAAAAGGCACAGGTTTTGGATGTTGTTGGGCCTTTGACTTGTGATATATCTATGGATGAGAGCAAAGAGATTGTTCAAGGAGTGTCCCAAGATATGCTGGAGACCGCGCTTCCTCGACGTGGGGGACCAGTTCTTGTGCTATCTGGTAAATATAAGGGTGCCTTTGGGAGCCTGGTTGAGAGGGATTTGGATCGGGAAGTTGGTGTTGTTCAGGATGCTGATACTCATGAGCTGCTCAATGTGAAGCTTGAACAGATTGCAGAGTATATAGGGGATCCCAGCTTATTAGGGCATTGA 1413 0.5039 MKLSFSIPSKSSSSSNPIKLDHSSKNDAPPSKHFVTEFDPSKPPTEQTATVIPPIQNEWRPTKKMKNLELPITDPNADHQSLEFEHDSNAADAEPGTDMSYGLNLRQAAEKNGKTGELADDEDDRVPRQRPEVALLQKFKDDLKRLPDHQGFEEFNDVPVEGFGKALLAGYGWSEGMGIGRNAKEDVKIVEYKRRTAKEGLGFVGNDRGSVQSQKKEEKKKSREDSGRNDADFVSEKKIVRIIGGKDAGLKGIVVRRIGEDWIVLKVSRSGEEVEARVSVDDVAELGSAEEERCLRKLKELRIRHKGEDDCNRDKASRHKRERDEKTTRVKANGGDHRKEDQQRGKKRISWLTSHIRVRVISQNIKGGRLYLKKAQVLDVVGPLTCDISMDESKEIVQGVSQDMLETALPRRGGPVLVLSGKYKGAFGSLVERDLDREVGVVQDADTHELLNVKLEQIAEYIGDPSLLGH* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0097 470 PANTHER G PATCH AND KOW-CONTAINING 1 468 IPR045166 GO:0000398
Amo02g0097 470 MobiDBLite consensus disorder prediction 41 55 - -
Amo02g0097 470 SMART kow_9 409 436 IPR005824 -
Amo02g0097 470 SMART kow_9 233 260 IPR005824 -
Amo02g0097 470 MobiDBLite consensus disorder prediction 113 128 - -
Amo02g0097 470 MobiDBLite consensus disorder prediction 307 346 - -
Amo02g0097 470 MobiDBLite consensus disorder prediction 203 229 - -
Amo02g0097 470 Pfam G-patch domain 147 203 IPR026822 -
Amo02g0097 470 MobiDBLite consensus disorder prediction 1 128 - -
Amo02g0097 470 MobiDBLite consensus disorder prediction 211 229 - -
Amo02g0097 470 ProSiteProfiles G-patch domain profile. 160 206 IPR000467 GO:0003676
Amo02g0097 470 Gene3D - 355 409 - -
Amo02g0097 470 MobiDBLite consensus disorder prediction 1 22 - -
Amo02g0097 470 SMART G-patch_5 158 204 IPR000467 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0097 Amo-Chr2 1128028 1129955 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0097 351 443 C2H2 Transcription Factor Family AT1G55460 33.333 6.72e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0097 K13101 - gmx:100784983 501.516