Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0080 ATGTTTGTGGGATCAAGAAAATGGGTGGTATTGGTAGCAACAATATGGATACAAGCATTTACAGGAACAAACTTTGACTTCTCATCATACTCATCAGAGTTGAAATCTGTGCTCCAAATCACTCAGCTTCAGCTGAATTATCTCTCAGTTGCATCTGACATGGGAAAAGTTTTTGGGTGGTGTTGTGGTGTGTCTCTCTTGTACTTTCCTTTGTGGGTTGTTCTGTTCATGGCTACTTCTTGGTTTTCTTGGTTATGGCTTCCAGTGTTTCTCCTATGCTTGGTTGCAGGATGTAGCATCTGTTGGTTCAACACAATCTGCTATGTCTTATGCATCAAGCATTTCCCTTCTAACCGATCRCTCGCGCTTTCCTTAAGCATAAGCTTCAATGGGGTAASTGCAGCTTTGTACACTCTCATTGCCAATGCAATAACCTCAAGTGATGACACACTCTACCTTTTGCTCAATGCYATTGTCCCTTTACTTATTTCCGCGGTGGTACTAGTCCCAATCCTCCAACAGCCKCAGCCTCAGCCGAATTCGGCCGACATGATCCGGCGTGAYTCCTTAGTTTTCCTCTGCCTCAACATCCTTGCACTMGTGACCGGCCTCTACCTCTTGTTCCTGTATTCCCTCTCTTCCARCACAACCATYGCGCGTGTCATTCTCGTTGGCGCCGGATTTCTAYTAGTGCTTCTCTTGTTCTTGCCTGTGATTGTGAATTCTAGAGAATGGTCTTGCCTTACTAGCCCTGCTTGTTATCCGCTTTTGAATTCGAGAGAGAAGTGTTGTTTTGATAMTGTGTTGTTGAAAGATCAACTTAAGGTTCTTGGAGAAGAGCATTCAACTAAAATGCTTATGCATAGATGGGACTTTTGGATTTATTACATGGCTTATTTATGTGGAGGAACAATGGGATTGGTYTATAGTAACAACTTGGGTCAAATTTCTCAATCATTGGGACACAATTCTCAGACAAAAACTCTTGTCACACTTTACTCCACGTGTTCTTTCTTCGGTCGCCTACTCGCCGCCGCACCTGACTTCTTGAACAGGAAGATACACTTTGCAAGAACAGGATGGTTTGCAGCAGCAGTAGTGCCAATGACTATAGCATTCATTTTGCTCGCCATAACCGGCAGCATCGAAGCGTTGCGCATGAGCACGGCCTTAATCGGCCTAAGTTCCGGGTTTGTTTTCGCGGCAGCAGTTTCCATTACATCAGAGTTATTTGGTCCAAACAGTGTTGCAGTGAACCACAACATACTAATCACCAACATTCCAATAGGGTCATGCCTTTATGGCCTTCTAGCAGCTCTGGTTTACGACTCGAACGCAGACGGCGCAAGCCGCGACACAATGTGGCTGCGCGAGATGACAATGTGTATGGGGAGGAAGTGCTACCTTGAGACATTTTTATGGTGGTGTTGCATCTCCATTGTAGGATTGGTTTCAAGTTTTGTGCTATACTTTAGGACTAGGCATGCTTATTATGACAATTTTGGAAGAAATACAAATTGA 1521 0.4392 MFVGSRKWVVLVATIWIQAFTGTNFDFSSYSSELKSVLQITQLQLNYLSVASDMGKVFGWCCGVSLLYFPLWVVLFMATSWFSWLWLPVFLLCLVAGCSICWFNTICYVLCIKHFPSNRSLALSLSISFNGVXAALYTLIANAITSSDDTLYLLLNAIVPLLISAVVLVPILQQPQPQPNSADMIRRDSLVFLCLNILALVTGLYLLFLYSLSSXTTIARVILVGAGFLLVLLLFLPVIVNSREWSCLTSPACYPLLNSREKCCFDXVLLKDQLKVLGEEHSTKMLMHRWDFWIYYMAYLCGGTMGLVYSNNLGQISQSLGHNSQTKTLVTLYSTCSFFGRLLAAAPDFLNRKIHFARTGWFAAAVVPMTIAFILLAITGSIEALRMSTALIGLSSGFVFAAAVSITSELFGPNSVAVNHNILITNIPIGSCLYGLLAALVYDSNADGASRDTMWLREMTMCMGRKCYLETFLWWCCISIVGLVSSFVLYFRTRHAYYDNFGRNTN* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0080 506 PANTHER NODULIN-LIKE/MFS TRANSPORTER 5 252 - -
Amo02g0080 506 SUPERFAMILY MFS general substrate transporter 6 178 IPR036259 -
Amo02g0080 506 PANTHER NODULIN-LIKE/MFS TRANSPORTER 260 500 - -
Amo02g0080 506 SUPERFAMILY MFS general substrate transporter 189 495 IPR036259 -
Amo02g0080 506 Gene3D MFS general substrate transporter like domains 291 497 IPR036259 -
Amo02g0080 506 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 252 - -
Amo02g0080 506 Pfam Nodulin-like 7 240 IPR010658 -
Amo02g0080 506 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 260 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0080 Amo-Chr2 958850 965324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0080 1 498 Nodulin-like Gene Family AT1G31470 53.407 2.17e-169 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0080 - - gmx:100813947 717.227