Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0070 ATGGCTCTTTGGTTATGCTGCGGAAATGGCAAGAAACGAGGGAAAGAACACGCGACGTGGCGTGTGTTTTCTTTGAAGGAATTACAGTCTGCTACAAATAATTTTAACTATGATAACAAGCTTGGAGAAGGGGGCTTTGGCAGTGTGTATTGGGGCCAACTTTGGGACGGATCGCAAATCGCAGTCAAGAGATTGAAAGTTTGGAGCAACAAAGCTGACATGGAATTTGCCGTTGAAGTTGAAATATTGGCAAGAGTTCGGCACAGGAATCTTCTTAGTCTACGTGGCTATTGTGCTGAAGGGCAGGAACGGTTGATTGTATATGATTATATGCCGAATCTGAGCTTGCTCTCTCATCTACATGGATCGCACTCGTCAGAATGCCTTCTTGATTGGAAACGGCGGATGGATATTGCAATTGGATCTGCTGAGGGGATTGTATATCTTCACCACCAAGCAACACCGCATATCATCCCAGGGATATCAAGGCAAGCAACGTTTTGCTAG 507 0.4517 MALWLCCGNGKKRGKEHATWRVFSLKELQSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFAVEVEILARVRHRNLLSLRGYCAEGQERLIVYDYMPNLSLLSHLHGSHSSECLLDWKRRMDIAIGSAEGIVYLHHQATPHIIPGISRQATFC* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0070 168 ProSitePatterns Protein kinases ATP-binding region signature. 41 63 IPR017441 GO:0005524
Amo02g0070 168 Pfam Protein tyrosine and serine/threonine kinase 37 156 IPR001245 GO:0004672|GO:0006468
Amo02g0070 168 Gene3D Transferase(Phosphotransferase) domain 1 111 159 - -
Amo02g0070 168 PANTHER BNAA05G14800D PROTEIN 4 159 - -
Amo02g0070 168 PANTHER OS01G0750732 PROTEIN 4 159 - -
Amo02g0070 168 SUPERFAMILY Protein kinase-like (PK-like) 18 157 IPR011009 -
Amo02g0070 168 ProSiteProfiles Protein kinase domain profile. 35 168 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo02g0070 168 SMART tyrkin_6 35 167 IPR020635 GO:0004713|GO:0006468
Amo02g0070 168 Gene3D Phosphorylase Kinase; domain 1 9 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0070 Amo-Chr2 824943 827700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0070 23 158 Trihelix Transcription Factor Family AT1G70460 52.941 1.55e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Amo02g0070 PK_Tyr_Ser-Thr 9.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0070 - - lja:Lj3g3v0044340.1 286.96