Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0009 ATGAAAGAAAATAGTGTCACTTTGAAAGCTGGAGAGCTCCCTTGTCGATTGACTCGTGCTCGAGCTGCTGCATTTCGTGCATCAGGACAGCTTCCACCAGTGAAGGAACCAGCAAAGCAGCAGAATCAGAAGCAGCCGCAGCTGCGAGCCAATCCAAAAAGAGCAGTTTCTGATAATGCTTGTCTTCAGCGCAAGAAGAGAGCTGTTCTTCAGGATGTTACTAATGTTTTCTGTGAGAATACTTACAGGAGCTGTTTCAATTCAACTAAAATTCAGGGTAAGAAGAGCAAGCTGGCAATGGCTAGTCGAATCAATGTTTCCAAAGTGGCGCCTTCTGCTGCTGCGCAGCAACATGTTCGAGTTCACTGCAAAACAAAGAGTTTTCCGGAGCCAGCCAAGAAGTGTAGCCCTTTTCCAATTGCATTAAGGGATCCAGAGATTGCTAACATAGATGATGATAATGAAGATCCTCAGTTGTGCAGCCTCTATGCTGCTGATATCTACAACACCTTGCGAGTTTATGAGCTCGCAAGAAGGCCGAATCCTAACTTTATGGACACAAAGCAGCACGACATTACTCAAAGCATGCGCGGGATACTGGTCGATTGGCTTGTAGAGGTTTCTGAGGAATACAGATTGGGACTAGACACTCTTTATCTCACTGTGTATCTCATAGATTGGTTTCTCTCCAGAAATTACATAGAAAGACAGAGACTTCAGCTACTTGGGATCACATGCATGTTAATCGCCTCGAAGTATGAAGAAATTAATGCCCCACGAATCGAAGATTTTTGCTACATCACAGACAACACATACACGAAAGTGGAGGTACTGAAAATGGAGAGCCAAGTGTTGAAATCTTCTGGATATCAGCTTTTTGCTCCCACTACAATAAGTTTCCTCAGGAGGTTTCTTCAAGCTGCTCAAGCATCATCCAAGAGTCCGAGCCTTGAATTGGAGTACTTGGCCAACTATCTAGCTGAACTAACATTGATGGAATATAGTTTCTTGAATTTCCTTCCATCTACCATTGCTGCATCAGCTGTGTTCCTTGCCAAATGGACATTGGATCAGTCAAAACATCCATGGAATCCAACTCTTCAGCACTATGCTTGTTACAAAGCATCAGATTTGAAAACCACAGTTCTTGCATTACAAGATCTGCAGTTGAATATCAATGGATGCCCTCTAACTGCGATTCGCTCGAAGTACAGTCAAGACAAGTTTAAATGTGTAGGGTCCTTGTCTCCACCAAAACTACCTGAAACTATGTTCTGA 1278 0.4335 MKENSVTLKAGELPCRLTRARAAAFRASGQLPPVKEPAKQQNQKQPQLRANPKRAVSDNACLQRKKRAVLQDVTNVFCENTYRSCFNSTKIQGKKSKLAMASRINVSKVAPSAAAQQHVRVHCKTKSFPEPAKKCSPFPIALRDPEIANIDDDNEDPQLCSLYAADIYNTLRVYELARRPNPNFMDTKQHDITQSMRGILVDWLVEVSEEYRLGLDTLYLTVYLIDWFLSRNYIERQRLQLLGITCMLIASKYEEINAPRIEDFCYITDNTYTKVEVLKMESQVLKSSGYQLFAPTTISFLRRFLQAAQASSKSPSLELEYLANYLAELTLMEYSFLNFLPSTIAASAVFLAKWTLDQSKHPWNPTLQHYACYKASDLKTTVLALQDLQLNINGCPLTAIRSKYSQDKFKCVGSLSPPKLPETMF* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0009 425 SMART cyclin_7 202 286 IPR013763 -
Amo02g0009 425 SMART cyclin_7 299 387 IPR013763 -
Amo02g0009 425 Gene3D - 180 293 - -
Amo02g0009 425 PANTHER CYCLIN-A2-4 46 425 - -
Amo02g0009 425 PANTHER CYCLINS 46 425 IPR039361 -
Amo02g0009 425 SUPERFAMILY Cyclin-like 295 419 IPR036915 -
Amo02g0009 425 SUPERFAMILY Cyclin-like 155 291 IPR036915 -
Amo02g0009 425 CDD CYCLIN 196 285 IPR013763 -
Amo02g0009 425 Gene3D - 166 413 - -
Amo02g0009 425 Pfam Cyclin, C-terminal domain 295 417 IPR004367 -
Amo02g0009 425 MobiDBLite consensus disorder prediction 27 56 - -
Amo02g0009 425 Pfam Cyclin, N-terminal domain 166 287 IPR006671 -
Amo02g0009 425 PIRSF Cyclin_A_B_D_E 33 424 IPR039361 -
Amo02g0009 425 SMART Cyclin_C_2 295 418 IPR004367 -
Amo02g0009 425 MobiDBLite consensus disorder prediction 35 52 - -
Amo02g0009 425 CDD CYCLIN 295 385 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0009 Amo-Chr2 186571 191632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0009 2 425 Core Cell Cycle Gene Families AT1G80370 54.267 2.12e-162 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0009 K06627 - gmx:100793657 594.734