Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g4234 ATGGAGTGTTACCCTTCACTTCCGTTTTATGAAACTCTTTCCATCGAGCCAATTTCAACTATTAAAGACTATGACTTTTATGATATCAAGAAAGGGTTTTCTGTCTGGAACGAAGTGGATGCCGGCTTTGATTGTTCAGAAAAAGTTTCATCATCATCATTACTTTCCAACAAAAACAATGAAGAAGATAAGAGCATCCGGAGGGTTATGAATAAACGAGTTTGTAGAGAAGAGAGAAGTAGCAACAGTACGAAAATGTTATCAAGGAAGATGATATCGGAGTATTTCTACATGCCAATAACTCAAGCAGCGAAGGAACTTGATGTGGGCTTAACTCTTTTGAAGAAGAGATGCAGAGAGTTAGGGATTCGAAGGTGGCCTCATCGAAAACTTATGAGCCTTCAAACCCTCATCAATAATGTTCAGGAGCTAGGGAAGGAAGAGGGGAGAGAGAGTGAAGAGAAGCTAAGGAATGCAATTGAGATATTAGAGAAGGAAAAGAAGCTTCTGGAAGAAATGCCTGATTTGCAACTTGAAGACAATACCAAAAGACTTAGACAAGCATGCTTCAAGGCTAATTACAAGAAGAGGAAGCTCATGATGGGTTGTACTTCAAATTCATCCATGGAATCTTCGTCTTCATCATCATATCATATTATTGGACATAATGCATTAAGAACAGCTAGTCAGAGTAACACAATGGGTGGTGTTAAATTTATTAGCTTTGATGATGATGAATATCATGAACGAGACATCAAATCTGTGTTGTCTTTGCCTTCTTTCTCCCACAACATTCAAATGTGTTCTAGCTATATGTTTAATCACCCAAGTGATGCTTCCTTTTCCTCCGCCATAAGATGA 861 0.3833 MECYPSLPFYETLSIEPISTIKDYDFYDIKKGFSVWNEVDAGFDCSEKVSSSSLLSNKNNEEDKSIRRVMNKRVCREERSSNSTKMLSRKMISEYFYMPITQAAKELDVGLTLLKKRCRELGIRRWPHRKLMSLQTLINNVQELGKEEGRESEEKLRNAIEILEKEKKLLEEMPDLQLEDNTKRLRQACFKANYKKRKLMMGCTSNSSMESSSSSSYHIIGHNALRTASQSNTMGGVKFISFDDDEYHERDIKSVLSLPSFSHNIQMCSSYMFNHPSDASFSSAIR* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g4234 286 PANTHER PROTEIN RKD1-RELATED 15 216 - -
Amo01g4234 286 Coils Coil 146 173 - -
Amo01g4234 286 ProSiteProfiles RWP-RK domain profile. 70 154 IPR003035 -
Amo01g4234 286 Pfam RWP-RK domain 87 134 IPR003035 -
Amo01g4234 286 PANTHER PROTEIN RKD4 15 216 IPR044607 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g4234 Amo-Chr1 118025409 118026968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g4234 73 198 AtRKD Transcription Factor Family AT1G18790 70.312 3.39e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Amo01g4234 RWP-RK 1.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g4234 - - adu:107470725 496.508